RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C NRG1Q03125 231 aa3.97□□□□□ -1.77
SDO1YLR022C YDR524C-BQ3E6R4 66 aa3.97□□□□□ -1.77
SDO1YLR022C EUG1P32474 517 aa3.96□□□□□ -1.78
SDO1YLR022C QRI1P43123 477 aaKnown RBP3.96□□□□□ -1.78
SDO1YLR022C DAS1P47005 663 aa3.96□□□□□ -1.78
SDO1YLR022C FCP1Q03254 732 aa3.96□□□□□ -1.78
SDO1YLR022C PSF3Q12146 194 aa3.96□□□□□ -1.78
SDO1YLR022C DIF1O13577 133 aa3.95□□□□□ -1.78
SDO1YLR022C ERR1P0CX10 437 aa3.95□□□□□ -1.78
SDO1YLR022C ERR2P0CX11 437 aa3.95□□□□□ -1.78
SDO1YLR022C LAT1P12695 482 aaKnown RBP3.95□□□□□ -1.78
SDO1YLR022C RGT1P32862 1170 aa3.95□□□□□ -1.78
SDO1YLR022C MTC2P34246 357 aa3.95□□□□□ -1.78
SDO1YLR022C PPS1P38148 807 aa3.95□□□□□ -1.78
SDO1YLR022C YHL017WP38745 532 aa3.95□□□□□ -1.78
SDO1YLR022C YIR042CP40586 236 aa3.95□□□□□ -1.78
SDO1YLR022C BUD6P41697 788 aa3.95□□□□□ -1.78
SDO1YLR022C SHR5P41912 237 aa3.95□□□□□ -1.78
SDO1YLR022C YJL163CP46996 555 aa3.95□□□□□ -1.78
SDO1YLR022C TGL5Q12043 749 aa3.95□□□□□ -1.78
SDO1YLR022C MLP1Q02455 1875 aaKnown RBP3.94□□□□□ -1.78
SDO1YLR022C PER1P25625 357 aa3.94□□□□□ -1.78
SDO1YLR022C PBP2P38151 413 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
SDO1YLR022C ECM1P39715 212 aa3.94□□□□□ -1.78
SDO1YLR022C ATF1P40353 525 aa3.94□□□□□ -1.78
SDO1YLR022C ALY2P47029 1046 aa3.94□□□□□ -1.78
SDO1YLR022C ASM4Q05166 528 aa3.94□□□□□ -1.78
SDO1YLR022C YDR338CQ05497 695 aa3.94□□□□□ -1.78
SDO1YLR022C HBT1Q07653 1046 aaKnown RBP3.94□□□□□ -1.78
SDO1YLR022C IRC10Q08118 586 aa3.94□□□□□ -1.78
SDO1YLR022C ATG11Q12527 1178 aa3.94□□□□□ -1.78
SDO1YLR022C SWI1P09547 1314 aa3.94□□□□□ -1.78
SDO1YLR022C UBR2Q07963 1872 aa3.93□□□□□ -1.78
SDO1YLR022C VMA2P16140 517 aaKnown RBP3.93□□□□□ -1.78
SDO1YLR022C SRP40P32583 406 aaPredicted RBP3.93□□□□□ -1.78
SDO1YLR022C TIM23P32897 222 aa3.93□□□□□ -1.78
SDO1YLR022C YKL091CP33324 310 aaKnown RBP3.93□□□□□ -1.78
SDO1YLR022C YBR259WP38338 688 aa3.93□□□□□ -1.78
SDO1YLR022C NOC2P39744 710 aaKnown RBP3.93□□□□□ -1.78
SDO1YLR022C RTR1P40084 226 aaPredicted RBP3.93□□□□□ -1.78
SDO1YLR022C SDS3P40505 327 aa3.93□□□□□ -1.78
SDO1YLR022C STU2P46675 888 aa3.93□□□□□ -1.78
SDO1YLR022C MTR3P48240 250 aaPredicted RBP3.93□□□□□ -1.78
SDO1YLR022C HSV2P50079 448 aaPredicted RBP3.93□□□□□ -1.78
SDO1YLR022C MDM12Q92328 271 aa3.93□□□□□ -1.78
SDO1YLR022C SUP35P05453 685 aaKnown RBP3.92□□□□□ -1.78
SDO1YLR022C MTH1P35198 433 aa3.92□□□□□ -1.78
SDO1YLR022C YBL028CP38202 106 aa3.92□□□□□ -1.78
SDO1YLR022C HOS4P40480 1083 aa3.92□□□□□ -1.78
SDO1YLR022C BAP3P41815 604 aa3.92□□□□□ -1.78
SDO1YLR022C SKP2P42843 763 aa3.92□□□□□ -1.78
SDO1YLR022C IRC13Q08630 104 aa3.92□□□□□ -1.78
SDO1YLR022C POT1P27796 417 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
SDO1YLR022C RPT3P33298 428 aaKnown RBP3.91□□□□□ -1.78
SDO1YLR022C BCD1P38772 366 aa3.91□□□□□ -1.78
SDO1YLR022C YFH7P43591 353 aa3.91□□□□□ -1.78
SDO1YLR022C BNA2P47125 453 aa3.91□□□□□ -1.78
SDO1YLR022C GND2P53319 492 aa3.91□□□□□ -1.78
SDO1YLR022C ECM16Q04217 1267 aaKnown RBP3.91□□□□□ -1.78
SDO1YLR022C CRR1Q05790 422 aa3.91□□□□□ -1.78
SDO1YLR022C MCM3P24279 971 aaKnown RBP3.9□□□□□ -1.79
SDO1YLR022C PPZ1P26570 692 aa3.9□□□□□ -1.79
SDO1YLR022C URK1P27515 501 aa3.9□□□□□ -1.79
SDO1YLR022C STO1P34160 861 aaKnown RBP3.9□□□□□ -1.79
SDO1YLR022C SPC42P36094 363 aa3.9□□□□□ -1.79
SDO1YLR022C FMP52P40008 231 aa3.9□□□□□ -1.79
SDO1YLR022C FMP10P40098 244 aa3.9□□□□□ -1.79
SDO1YLR022C NUP82P40368 713 aa3.9□□□□□ -1.79
SDO1YLR022C CAF16P43569 289 aa3.9□□□□□ -1.79
SDO1YLR022C UBC11P52492 156 aa3.9□□□□□ -1.79
SDO1YLR022C TEX1P53851 422 aaKnown RBP3.9□□□□□ -1.79
SDO1YLR022C SNP1Q00916 300 aaPredicted RBP3.9□□□□□ -1.79
SDO1YLR022C GAD1Q04792 585 aa3.9□□□□□ -1.79
SDO1YLR022C SGO1Q08490 590 aa3.9□□□□□ -1.79
SDO1YLR022C YLR125WQ12138 136 aa3.9□□□□□ -1.79
SDO1YLR022C SAC3P46674 1301 aa3.9□□□□□ -1.79
SDO1YLR022C CDC9P04819 755 aa3.89□□□□□ -1.79
SDO1YLR022C SYN8P31377 255 aa3.89□□□□□ -1.79
SDO1YLR022C TOM71P38825 639 aaKnown RBP3.89□□□□□ -1.79
SDO1YLR022C NUG1P40010 520 aaKnown RBP3.89□□□□□ -1.79
SDO1YLR022C YTA12P40341 825 aa3.89□□□□□ -1.79
SDO1YLR022C MPP10P47083 593 aaKnown RBP3.89□□□□□ -1.79
SDO1YLR022C PRP31P49704 494 aaPredicted RBP3.89□□□□□ -1.79
SDO1YLR022C TEL2P53038 688 aa3.89□□□□□ -1.79
SDO1YLR022C EMI2Q04409 500 aaKnown RBP3.89□□□□□ -1.79
SDO1YLR022C RTP1Q12751 981 aa3.89□□□□□ -1.79
SDO1YLR022C YLR149CQ99296 730 aa3.89□□□□□ -1.79
SDO1YLR022C SIR3P06701 978 aa3.88□□□□□ -1.79
SDO1YLR022C PHO8P11491 566 aa3.88□□□□□ -1.79
SDO1YLR022C ADE2P21264 571 aaKnown RBP3.88□□□□□ -1.79
SDO1YLR022C GSY1P23337 708 aa3.88□□□□□ -1.79
SDO1YLR022C MEF1P25039 761 aa3.88□□□□□ -1.79
SDO1YLR022C PEX2P32800 271 aa3.88□□□□□ -1.79
SDO1YLR022C MIP6P38760 659 aaKnown RBP3.88□□□□□ -1.79
SDO1YLR022C PCL5P38794 229 aa3.88□□□□□ -1.79
SDO1YLR022C SGM1P47166 707 aa3.88□□□□□ -1.79
SDO1YLR022C YNL034WP53963 612 aa3.88□□□□□ -1.79
SDO1YLR022C YNL018CP53976 612 aa3.88□□□□□ -1.79
SDO1YLR022C DAK1P54838 584 aaKnown RBP3.88□□□□□ -1.79
SDO1YLR022C VPS72Q03388 795 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms