RNA–Protein interactions for RNA: YLR008C

PAM18, Transcript of Subunit of the import motor (PAM complex), yeast

Gene PAM18, Length 507 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM18	YLR008C	NFS1	P25374	497 aa		4.25	□□□□□ -1.73
PAM18	YLR008C	MLS1	P30952	554 aa		4.25	□□□□□ -1.73
PAM18	YLR008C	MDL1	P33310	695 aa		4.25	□□□□□ -1.73
PAM18	YLR008C	WHI3	P34761	661 aa	Known RBP	4.25	□□□□□ -1.73
PAM18	YLR008C	RER2	P35196	286 aa		4.25	□□□□□ -1.73
PAM18	YLR008C	ETP1	P38748	585 aa	Known RBP	4.25	□□□□□ -1.73
PAM18	YLR008C	AXL2	P38928	823 aa		4.25	□□□□□ -1.73
PAM18	YLR008C	MBP1	P39678	833 aa		4.25	□□□□□ -1.73
PAM18	YLR008C	YJL068C	P40363	299 aa		4.25	□□□□□ -1.73
PAM18	YLR008C	SEC28	P40509	296 aa	Known RBP	4.25	□□□□□ -1.73
PAM18	YLR008C	MMM1	P41800	426 aa		4.25	□□□□□ -1.73
PAM18	YLR008C	AIP1	P46680	615 aa	Known RBP	4.25	□□□□□ -1.73
PAM18	YLR008C	AIM14	P53109	570 aa		4.25	□□□□□ -1.73
PAM18	YLR008C	SSL2	Q00578	843 aa		4.25	□□□□□ -1.73
PAM18	YLR008C	PEX25	Q02969	394 aa		4.25	□□□□□ -1.73
PAM18	YLR008C	YDR131C	Q03899	556 aa		4.25	□□□□□ -1.73
PAM18	YLR008C	DPB4	Q04603	196 aa	Known RBP	4.25	□□□□□ -1.73
PAM18	YLR008C	MFB1	Q04922	465 aa		4.25	□□□□□ -1.73
PAM18	YLR008C	ECM38	Q05902	660 aa	Predicted RBP	4.25	□□□□□ -1.73
PAM18	YLR008C	YER152C	P10356	443 aa		4.24	□□□□□ -1.73
PAM18	YLR008C	HOM2	P13663	365 aa	Known RBP	4.24	□□□□□ -1.73
PAM18	YLR008C	OM45	P16547	393 aa		4.24	□□□□□ -1.73
PAM18	YLR008C	COX11	P19516	300 aa	Known RBP	4.24	□□□□□ -1.73
PAM18	YLR008C	RPN2	P32565	945 aa	Known RBP	4.24	□□□□□ -1.73
PAM18	YLR008C	HBS1	P32769	611 aa	Known RBP	4.24	□□□□□ -1.73
PAM18	YLR008C	YKU70	P32807	602 aa		4.24	□□□□□ -1.73
PAM18	YLR008C	SLC1	P33333	303 aa		4.24	□□□□□ -1.73
PAM18	YLR008C	NNK1	P36003	928 aa		4.24	□□□□□ -1.73
PAM18	YLR008C	MCD4	P36051	919 aa		4.24	□□□□□ -1.73
PAM18	YLR008C	MIC60	P36112	540 aa		4.24	□□□□□ -1.73
PAM18	YLR008C	CCL1	P37366	393 aa		4.24	□□□□□ -1.73
PAM18	YLR008C	YBR284W	P38150	797 aa		4.24	□□□□□ -1.73
PAM18	YLR008C	RFC1	P38630	861 aa	Known RBP	4.24	□□□□□ -1.73
PAM18	YLR008C	PEX18	P38855	283 aa		4.24	□□□□□ -1.73
PAM18	YLR008C	ZIM17	P42844	174 aa		4.24	□□□□□ -1.73
PAM18	YLR008C	GZF3	P42944	551 aa	Known RBP	4.24	□□□□□ -1.73
PAM18	YLR008C	RMD8	P43620	662 aa		4.24	□□□□□ -1.73
PAM18	YLR008C	YGR153W	P48238	217 aa		4.24	□□□□□ -1.73
PAM18	YLR008C	PSP2	P50109	593 aa	Known RBP	4.24	□□□□□ -1.73
PAM18	YLR008C	ZIP2	P53061	704 aa		4.24	□□□□□ -1.73
PAM18	YLR008C	ARC35	P53731	342 aa	Known RBP	4.24	□□□□□ -1.73
PAM18	YLR008C	ROD1	Q02805	837 aa		4.24	□□□□□ -1.73
PAM18	YLR008C	RRN5	Q02983	363 aa		4.24	□□□□□ -1.73
PAM18	YLR008C	YLR345W	Q06137	509 aa		4.24	□□□□□ -1.73
PAM18	YLR008C	MCP2	Q06567	569 aa		4.24	□□□□□ -1.73
PAM18	YLR008C	YCG1	Q06680	1035 aa		4.24	□□□□□ -1.73
PAM18	YLR008C	CSR1	Q06705	408 aa	Known RBP	4.24	□□□□□ -1.73
PAM18	YLR008C	NBA1	Q08229	501 aa	Known RBP	4.24	□□□□□ -1.73
PAM18	YLR008C	APL4	Q12028	832 aa		4.24	□□□□□ -1.73
PAM18	YLR008C	FRE6	Q12473	712 aa		4.24	□□□□□ -1.73
PAM18	YLR008C	VMR1	P38735	1592 aa		4.23	□□□□□ -1.73
PAM18	YLR008C	SEM1	O94742	89 aa		4.23	□□□□□ -1.73
PAM18	YLR008C	CKA1	P15790	372 aa		4.23	□□□□□ -1.73
PAM18	YLR008C	KAR3	P17119	729 aa		4.23	□□□□□ -1.73
PAM18	YLR008C	SED4	P25365	1065 aa		4.23	□□□□□ -1.73
PAM18	YLR008C	RRP7	P25368	297 aa	Predicted RBP	4.23	□□□□□ -1.73
PAM18	YLR008C	MSH1	P25846	959 aa		4.23	□□□□□ -1.73
PAM18	YLR008C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
PAM18	YLR008C	RME1	P32338	300 aa	Known RBP	4.23	□□□□□ -1.73
PAM18	YLR008C	ERG3	P32353	365 aa		4.23	□□□□□ -1.73
PAM18	YLR008C	SMI1	P32566	505 aa		4.23	□□□□□ -1.73
PAM18	YLR008C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
PAM18	YLR008C	TEF4	P36008	412 aa	Known RBP	4.23	□□□□□ -1.73
PAM18	YLR008C	CCZ1	P38273	704 aa		4.23	□□□□□ -1.73
PAM18	YLR008C	RTS1	P38903	757 aa		4.23	□□□□□ -1.73
PAM18	YLR008C	BUD16	P39988	312 aa		4.23	□□□□□ -1.73
PAM18	YLR008C	KHA1	P40309	873 aa		4.23	□□□□□ -1.73
PAM18	YLR008C	YIL161W	P40449	235 aa	Known RBP	4.23	□□□□□ -1.73
PAM18	YLR008C	LCB2	P40970	561 aa		4.23	□□□□□ -1.73
PAM18	YLR008C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
PAM18	YLR008C	UBP6	P43593	499 aa	Known RBP	4.23	□□□□□ -1.73
PAM18	YLR008C	MNN11	P46985	422 aa	Known RBP	4.23	□□□□□ -1.73
PAM18	YLR008C	NUP84	P52891	726 aa		4.23	□□□□□ -1.73
PAM18	YLR008C	ADA2	Q02336	434 aa		4.23	□□□□□ -1.73
PAM18	YLR008C	TPP1	Q03796	238 aa		4.23	□□□□□ -1.73
PAM18	YLR008C	MDM36	Q06820	579 aa		4.23	□□□□□ -1.73
PAM18	YLR008C	GUD1	Q07729	489 aa		4.23	□□□□□ -1.73
PAM18	YLR008C	ISA2	Q12425	185 aa		4.23	□□□□□ -1.73
PAM18	YLR008C	NSI1	Q12457	570 aa		4.23	□□□□□ -1.73
PAM18	YLR008C	RKM4	Q12504	494 aa		4.23	□□□□□ -1.73
PAM18	YLR008C	DRS2	P39524	1355 aa		4.23	□□□□□ -1.73
PAM18	YLR008C	IML1	P47170	1584 aa		4.23	□□□□□ -1.73
PAM18	YLR008C	CYC7	P00045	113 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	TRP3	P00937	484 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	MET17	P06106	444 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	CDC16	P09798	840 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	INO1	P11986	533 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	LAT1	P12695	482 aa	Known RBP	4.22	□□□□□ -1.73
PAM18	YLR008C	GUK1	P15454	187 aa	Known RBP	4.22	□□□□□ -1.73
PAM18	YLR008C	MSB1	P21339	1137 aa	Known RBP	4.22	□□□□□ -1.73
PAM18	YLR008C	PRP28	P23394	588 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	GPI10	P30777	616 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	MRE11	P32829	692 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	VPS17	P32913	551 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	SER1	P33330	395 aa	Known RBP	4.22	□□□□□ -1.73
PAM18	YLR008C	COY1	P34237	679 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	SHM2	P37291	469 aa	Known RBP	4.22	□□□□□ -1.73
PAM18	YLR008C	YBR225W	P38321	900 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	YBR238C	P38330	731 aa	Known RBP	4.22	□□□□□ -1.73
PAM18	YLR008C	GND1	P38720	489 aa	Known RBP	4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms