RNA–Protein interactions for RNA: YJL087C

TRL1, Transcript of tRNA ligase, yeast

Gene TRL1, Length 2,484 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRL1	YJL087C	SAP4	P53036	818 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	IMA1	P53051	589 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	BTN2	P53286	410 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	DSE4	P53753	1117 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	ACS1	Q01574	713 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	EAR1	Q03212	550 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	YMR210W	Q03649	449 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	GRX3	Q03835	250 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	YLR345W	Q06137	509 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	YCG1	Q06680	1035 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	AAD4	Q07747	329 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	ARG3	P05150	338 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	MTC7	P32633	139 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	ORC2	P32833	620 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	POA1	P38218	177 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	LTP1	P40347	161 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	YIL166C	P40445	542 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	BST1	P43571	1029 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	ENP2	P48234	707 aa	Known RBP	2.23	□□□□□ -2.05
TRL1	YJL087C	PEF1	P53238	335 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	BSC5	P53755	489 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	VPS9	P54787	451 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	SDH1	Q00711	640 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	TPP1	Q03796	238 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	PCD1	Q12524	340 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	ATG11	Q12527	1178 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	RPS9A	O13516	197 aa	Known RBP	2.23	□□□□□ -2.05
TRL1	YJL087C	CPA2	P03965	1118 aa	Known RBP	2.23	□□□□□ -2.05
TRL1	YJL087C	PDC5	P16467	563 aa	Known RBP	2.23	□□□□□ -2.05
TRL1	YJL087C	CWH43	P25618	953 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	SAC6	P32599	642 aa	Known RBP	2.23	□□□□□ -2.05
TRL1	YJL087C	RMA1	P36001	430 aa	Known RBP	2.23	□□□□□ -2.05
TRL1	YJL087C	YKR075C	P36155	307 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	UME6	P39001	836 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	FMP10	P40098	244 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	PRM2	P40534	656 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	CIR1	P42940	261 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	JJJ3	P47138	172 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	RAI1	P53063	387 aa	Known RBP	2.23	□□□□□ -2.05
TRL1	YJL087C	DUS1	P53759	423 aa	Known RBP	2.23	□□□□□ -2.05
TRL1	YJL087C	PRP3	Q03338	469 aa	Predicted RBP	2.23	□□□□□ -2.05
TRL1	YJL087C	RCR2	Q03446	210 aa	Known RBP	2.23	□□□□□ -2.05
TRL1	YJL087C	HPF1	Q05164	967 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	RRP9	Q06506	573 aa	Known RBP	2.23	□□□□□ -2.05
TRL1	YJL087C	CRD1	Q07560	283 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	ADY3	Q07732	790 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	RSB1	Q08417	382 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	NMD4	Q12129	218 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	HSP42	Q12329	375 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	SFI1	Q12369	946 aa		2.23	□□□□□ -2.05
TRL1	YJL087C	TY1B-A	O13527	1196 aa	Known RBP	2.22	□□□□□ -2.05
TRL1	YJL087C	SUI3	P09064	285 aa	Known RBP	2.22	□□□□□ -2.05
TRL1	YJL087C	RPS4A	P0CX35	261 aa	Known RBP	2.22	□□□□□ -2.05
TRL1	YJL087C	RPS4B	P0CX36	261 aa	Known RBP	2.22	□□□□□ -2.05
TRL1	YJL087C	CMP2	P14747	604 aa		2.22	□□□□□ -2.05
TRL1	YJL087C	DBF4	P32325	704 aa		2.22	□□□□□ -2.05
TRL1	YJL087C	KHA1	P40309	873 aa		2.22	□□□□□ -2.05
TRL1	YJL087C	SPO22	P40511	975 aa		2.22	□□□□□ -2.05
TRL1	YJL087C	ARF3	P40994	183 aa	RIP-Chip data	2.22	□□□□□ -2.05	not detected
TRL1	YJL087C	BUD8	P41698	603 aa		2.22	□□□□□ -2.05
TRL1	YJL087C	EXG2	P52911	562 aa		2.22	□□□□□ -2.05
TRL1	YJL087C	DUO1	P53168	247 aa	Known RBP	2.22	□□□□□ -2.05
TRL1	YJL087C	VPS75	P53853	264 aa		2.22	□□□□□ -2.05
TRL1	YJL087C	NSG2	P53898	299 aa		2.22	□□□□□ -2.05
TRL1	YJL087C	FCP1	Q03254	732 aa		2.22	□□□□□ -2.05
TRL1	YJL087C	ASM4	Q05166	528 aa		2.22	□□□□□ -2.05
TRL1	YJL087C	SVS1	Q12254	260 aa		2.22	□□□□□ -2.05
TRL1	YJL087C	GCN4	P03069	281 aa		2.22	□□□□□ -2.05
TRL1	YJL087C	URA3	P03962	267 aa		2.22	□□□□□ -2.05
TRL1	YJL087C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	2.22	□□□□□ -2.05	not detected
TRL1	YJL087C	RIT1	P23796	513 aa		2.22	□□□□□ -2.05
TRL1	YJL087C	SRO9	P25567	434 aa	Known RBP	2.22	□□□□□ -2.05
TRL1	YJL087C	ADK2	P26364	225 aa		2.22	□□□□□ -2.05
TRL1	YJL087C	ARP2	P32381	391 aa	Known RBP	2.22	□□□□□ -2.05
TRL1	YJL087C	MRPL36	P36531	177 aa		2.22	□□□□□ -2.05
TRL1	YJL087C	CDS1	P38221	457 aa		2.22	□□□□□ -2.05
TRL1	YJL087C	YJR061W	P40355	935 aa		2.22	□□□□□ -2.05
TRL1	YJL087C	YIL108W	P40483	696 aa	Known RBP	2.22	□□□□□ -2.05
TRL1	YJL087C	SSY5	P47002	699 aa		2.22	□□□□□ -2.05
TRL1	YJL087C	ECM22	Q05958	814 aa	Predicted RBP	2.22	□□□□□ -2.05
TRL1	YJL087C	ZRT2	Q12436	422 aa		2.22	□□□□□ -2.05
TRL1	YJL087C	GRX6	Q12438	231 aa		2.22	□□□□□ -2.05
TRL1	YJL087C	RTN2	Q12443	393 aa		2.22	□□□□□ -2.05
TRL1	YJL087C	COQ4	O13525	335 aa		2.21	□□□□□ -2.06
TRL1	YJL087C	GPM1	P00950	247 aa	Known RBP	2.21	□□□□□ -2.06
TRL1	YJL087C	HSF1	P10961	833 aa		2.21	□□□□□ -2.06
TRL1	YJL087C	PMS1	P14242	873 aa		2.21	□□□□□ -2.06
TRL1	YJL087C	ARG1	P22768	420 aa		2.21	□□□□□ -2.06
TRL1	YJL087C	LCB1	P25045	558 aa	Known RBP	2.21	□□□□□ -2.06
TRL1	YJL087C	PRE4	P30657	266 aa		2.21	□□□□□ -2.06
TRL1	YJL087C	PET127	P32606	800 aa		2.21	□□□□□ -2.06
TRL1	YJL087C	TEF4	P36008	412 aa	Known RBP	2.21	□□□□□ -2.06
TRL1	YJL087C	FSH1	P38777	243 aa	Known RBP	2.21	□□□□□ -2.06
TRL1	YJL087C	UTP9	P38882	575 aa	Known RBP	2.21	□□□□□ -2.06
TRL1	YJL087C	YJL068C	P40363	299 aa		2.21	□□□□□ -2.06
TRL1	YJL087C	ARC1	P46672	376 aa	Known RBP	2.21	□□□□□ -2.06
TRL1	YJL087C	POL31	P46957	487 aa		2.21	□□□□□ -2.06
TRL1	YJL087C	MRX6	P48564	524 aa		2.21	□□□□□ -2.06
TRL1	YJL087C	PIL1	P53252	339 aa	Known RBP	2.21	□□□□□ -2.06
TRL1	YJL087C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	2.21	□□□□□ -2.06	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms