RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W YPT11P48559 417 aa4.69□□□□□ -1.66
PRE9YGR135W MRPS35P53292 345 aa4.69□□□□□ -1.66
PRE9YGR135W NOG2P53742 486 aaKnown RBP4.69□□□□□ -1.66
PRE9YGR135W GYL1Q04322 720 aa4.69□□□□□ -1.66
PRE9YGR135W BLS1Q06071 122 aa4.69□□□□□ -1.66
PRE9YGR135W MDM38Q08179 573 aa4.69□□□□□ -1.66
PRE9YGR135W YDR056CQ12025 205 aa4.69□□□□□ -1.66
PRE9YGR135W RTP1Q12751 981 aa4.69□□□□□ -1.66
PRE9YGR135W RPS21BQ3E754 87 aaKnown RBP4.69□□□□□ -1.66
PRE9YGR135W RPS9AO13516 197 aaKnown RBP4.68□□□□□ -1.66
PRE9YGR135W TPM1P17536 199 aaKnown RBP4.68□□□□□ -1.66
PRE9YGR135W MSM1P22438 575 aa4.68□□□□□ -1.66
PRE9YGR135W MIH1P23748 554 aa4.68□□□□□ -1.66
PRE9YGR135W YCL002CP25565 263 aa4.68□□□□□ -1.66
PRE9YGR135W GSY2P27472 705 aa4.68□□□□□ -1.66
PRE9YGR135W SEC65P29478 273 aa4.68□□□□□ -1.66
PRE9YGR135W HSP104P31539 908 aaKnown RBP4.68□□□□□ -1.66
PRE9YGR135W BLI1P35727 113 aa4.68□□□□□ -1.66
PRE9YGR135W APL2P36000 726 aaPredicted RBP4.68□□□□□ -1.66
PRE9YGR135W MAL33P38157 468 aa4.68□□□□□ -1.66
PRE9YGR135W GDT1P38301 280 aaPredicted RBP4.68□□□□□ -1.66
PRE9YGR135W YHL012WP38709 493 aa4.68□□□□□ -1.66
PRE9YGR135W HXT6P39003 570 aaKnown RBP4.68□□□□□ -1.66
PRE9YGR135W HXT7P39004 570 aa4.68□□□□□ -1.66
PRE9YGR135W YER130CP39959 443 aa4.68□□□□□ -1.66
PRE9YGR135W SPO22P40511 975 aa4.68□□□□□ -1.66
PRE9YGR135W TNA1P53322 534 aa4.68□□□□□ -1.66
PRE9YGR135W CNM67P53865 581 aaKnown RBP4.68□□□□□ -1.66
PRE9YGR135W SFB2P53953 876 aa4.68□□□□□ -1.66
PRE9YGR135W WAR1Q03631 944 aa4.68□□□□□ -1.66
PRE9YGR135W LRS4Q04087 347 aaKnown RBP4.68□□□□□ -1.66
PRE9YGR135W CDA2Q06703 312 aa4.68□□□□□ -1.66
PRE9YGR135W YLL058WQ12198 575 aa4.68□□□□□ -1.66
PRE9YGR135W TY1B-NL2Q99337 1749 aaKnown RBP4.68□□□□□ -1.66
PRE9YGR135W PDR18P53756 1333 aa4.68□□□□□ -1.66
PRE9YGR135W BI4P03879 638 aa4.67□□□□□ -1.66
PRE9YGR135W PET123P17558 318 aa4.67□□□□□ -1.66
PRE9YGR135W NFU1P32860 256 aa4.67□□□□□ -1.66
PRE9YGR135W MDL2P33311 773 aa4.67□□□□□ -1.66
PRE9YGR135W TFC3P34111 1160 aa4.67□□□□□ -1.66
PRE9YGR135W TSA1P34760 196 aaKnown RBP4.67□□□□□ -1.66
PRE9YGR135W BYE1P36106 594 aa4.67□□□□□ -1.66
PRE9YGR135W GIC1P38785 314 aa4.67□□□□□ -1.66
PRE9YGR135W NPP2P39997 493 aa4.67□□□□□ -1.66
PRE9YGR135W GTS1P40956 396 aa4.67□□□□□ -1.66
PRE9YGR135W SRB7P47822 140 aa4.67□□□□□ -1.66
PRE9YGR135W ASK10P48361 1146 aa4.67□□□□□ -1.66
PRE9YGR135W HOL1P53389 586 aa4.67□□□□□ -1.66
PRE9YGR135W TEP1P53916 434 aa4.67□□□□□ -1.66
PRE9YGR135W RPN7Q06103 429 aaKnown RBP4.67□□□□□ -1.66
PRE9YGR135W OPY2Q06810 360 aa4.67□□□□□ -1.66
PRE9YGR135W PSK2Q08217 1101 aa4.67□□□□□ -1.66
PRE9YGR135W APL4Q12028 832 aa4.67□□□□□ -1.66
PRE9YGR135W HFI1Q12060 488 aa4.67□□□□□ -1.66
PRE9YGR135W DUR1,2P32528 1835 aaKnown RBP4.67□□□□□ -1.66
PRE9YGR135W SAM35P14693 329 aa4.66□□□□□ -1.66
PRE9YGR135W UBC1P21734 215 aaKnown RBP4.66□□□□□ -1.66
PRE9YGR135W RER1P25560 188 aa4.66□□□□□ -1.66
PRE9YGR135W CYS3P31373 394 aaKnown RBP4.66□□□□□ -1.66
PRE9YGR135W OAF3P36023 863 aa4.66□□□□□ -1.66
PRE9YGR135W PCH2P38126 564 aa4.66□□□□□ -1.66
PRE9YGR135W KTR3P38130 404 aaPredicted RBP4.66□□□□□ -1.66
PRE9YGR135W MAL31P38156 614 aa4.66□□□□□ -1.66
PRE9YGR135W PSY4P38193 441 aa4.66□□□□□ -1.66
PRE9YGR135W RFT1P38206 574 aaPredicted RBP4.66□□□□□ -1.66
PRE9YGR135W SAW1P39735 261 aa4.66□□□□□ -1.66
PRE9YGR135W TFG2P41896 400 aaPredicted RBP4.66□□□□□ -1.66
PRE9YGR135W CTK3P46963 296 aaPredicted RBP4.66□□□□□ -1.66
PRE9YGR135W HXT16P47185 567 aa4.66□□□□□ -1.66
PRE9YGR135W CTF4Q01454 927 aa4.66□□□□□ -1.66
PRE9YGR135W PRP3Q03338 469 aaPredicted RBP4.66□□□□□ -1.66
PRE9YGR135W TRS130Q03660 1102 aa4.66□□□□□ -1.66
PRE9YGR135W SPC19Q03954 165 aa4.66□□□□□ -1.66
PRE9YGR135W RRB1Q04225 511 aaKnown RBP4.66□□□□□ -1.66
PRE9YGR135W YCG1Q06680 1035 aa4.66□□□□□ -1.66
PRE9YGR135W YPL277CQ08989 487 aa4.66□□□□□ -1.66
PRE9YGR135W NUR1Q12066 484 aa4.66□□□□□ -1.66
PRE9YGR135W NCB2Q92317 146 aa4.66□□□□□ -1.66
PRE9YGR135W YRF1-2P40105 1681 aa4.65□□□□□ -1.66
PRE9YGR135W PRC1P00729 532 aa4.65□□□□□ -1.67
PRE9YGR135W CDC31P06704 161 aaKnown RBP4.65□□□□□ -1.67
PRE9YGR135W SRP54P20424 541 aaKnown RBP4.65□□□□□ -1.67
PRE9YGR135W SRO9P25567 434 aaKnown RBP4.65□□□□□ -1.67
PRE9YGR135W URA1P28272 314 aaPredicted RBP4.65□□□□□ -1.67
PRE9YGR135W FUN30P31380 1131 aa4.65□□□□□ -1.67
PRE9YGR135W PET309P32522 965 aaPredicted RBP4.65□□□□□ -1.67
PRE9YGR135W YSC84P32793 468 aa4.65□□□□□ -1.67
PRE9YGR135W YKR051WP36142 418 aa4.65□□□□□ -1.67
PRE9YGR135W FAT1P38225 669 aa4.65□□□□□ -1.67
PRE9YGR135W YHL017WP38745 532 aa4.65□□□□□ -1.67
PRE9YGR135W PPE1P38796 400 aa4.65□□□□□ -1.67
PRE9YGR135W SET5P38890 526 aaKnown RBP4.65□□□□□ -1.67
PRE9YGR135W FOL2P51601 243 aaKnown RBP4.65□□□□□ -1.67
PRE9YGR135W YKE2P52553 114 aa4.65□□□□□ -1.67
PRE9YGR135W YGL242CP53066 181 aa4.65□□□□□ -1.67
PRE9YGR135W MLC1P53141 149 aa4.65□□□□□ -1.67
PRE9YGR135W MEP3P53390 489 aa4.65□□□□□ -1.67
PRE9YGR135W CEG1Q01159 459 aaPredicted RBP4.65□□□□□ -1.67
PRE9YGR135W CLF1Q12309 687 aaPredicted RBP4.65□□□□□ -1.67
PRE9YGR135W MED1Q12321 566 aa4.65□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 95.5 ms