RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W CFT2Q12102 859 aaPredicted RBP3.82□□□□□ -1.8
CAF130YGR134W SGT2Q12118 346 aaKnown RBP3.82□□□□□ -1.8
CAF130YGR134W KCS1Q12494 1050 aa3.82□□□□□ -1.8
CAF130YGR134W LDB19Q12502 818 aa3.82□□□□□ -1.8
CAF130YGR134W RPO21P04050 1733 aaKnown RBP3.82□□□□□ -1.8
CAF130YGR134W GLN4P13188 809 aaKnown RBP3.82□□□□□ -1.8
CAF130YGR134W PHO3P24031 467 aa3.82□□□□□ -1.8
CAF130YGR134W PGS1P25578 521 aa3.82□□□□□ -1.8
CAF130YGR134W CAP1P28495 268 aaKnown RBP3.82□□□□□ -1.8
CAF130YGR134W GPI10P30777 616 aa3.82□□□□□ -1.8
CAF130YGR134W RIB7P33312 244 aa3.82□□□□□ -1.8
CAF130YGR134W SEG2P34250 1132 aa3.82□□□□□ -1.8
CAF130YGR134W HEL1P36113 551 aa3.82□□□□□ -1.8
CAF130YGR134W SRP68P38687 599 aaKnown RBP3.82□□□□□ -1.8
CAF130YGR134W RGA1P39083 1007 aa3.82□□□□□ -1.8
CAF130YGR134W PCL7P40186 285 aa3.82□□□□□ -1.8
CAF130YGR134W VNX1P42839 908 aa3.82□□□□□ -1.8
CAF130YGR134W HNT2P49775 206 aa3.82□□□□□ -1.8
CAF130YGR134W TOF1P53840 1238 aa3.82□□□□□ -1.8
CAF130YGR134W MRPL13Q02204 264 aa3.82□□□□□ -1.8
CAF130YGR134W RPC11Q04307 110 aaPredicted RBP3.82□□□□□ -1.8
CAF130YGR134W THI21Q08975 551 aa3.82□□□□□ -1.8
CAF130YGR134W CWC2Q12046 339 aaPredicted RBP3.82□□□□□ -1.8
CAF130YGR134W NTE1Q04958 1679 aa3.82□□□□□ -1.8
CAF130YGR134W SUI3P09064 285 aaKnown RBP3.82□□□□□ -1.8
CAF130YGR134W SIR1P21691 654 aa3.82□□□□□ -1.8
CAF130YGR134W PRP45P28004 379 aaPredicted RBP3.82□□□□□ -1.8
CAF130YGR134W SWC3P31376 625 aa3.82□□□□□ -1.8
CAF130YGR134W SRP72P38688 640 aaKnown RBP3.82□□□□□ -1.8
CAF130YGR134W DSD1P53095 428 aa3.82□□□□□ -1.8
CAF130YGR134W YNL035CP53962 389 aaKnown RBP3.82□□□□□ -1.8
CAF130YGR134W EAR1Q03212 550 aa3.82□□□□□ -1.8
CAF130YGR134W YAP6Q03935 383 aa3.82□□□□□ -1.8
CAF130YGR134W LRS4Q04087 347 aaKnown RBP3.82□□□□□ -1.8
CAF130YGR134W APC5Q08683 685 aa3.82□□□□□ -1.8
CAF130YGR134W APL5Q08951 932 aaKnown RBP3.82□□□□□ -1.8
CAF130YGR134W NUR1Q12066 484 aa3.82□□□□□ -1.8
CAF130YGR134W NFI1Q12216 726 aa3.82□□□□□ -1.8
CAF130YGR134W YLR149CQ99296 730 aa3.82□□□□□ -1.8
CAF130YGR134W CDC25P04821 1589 aa3.81□□□□□ -1.8
CAF130YGR134W ENA1P13587 1091 aa3.81□□□□□ -1.8
CAF130YGR134W PFK2P16862 959 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
CAF130YGR134W TRK2P28584 889 aa3.81□□□□□ -1.8
CAF130YGR134W PSD1P39006 500 aa3.81□□□□□ -1.8
CAF130YGR134W STL1P39932 569 aa3.81□□□□□ -1.8
CAF130YGR134W LYS4P49367 693 aaPredicted RBP3.81□□□□□ -1.8
CAF130YGR134W ENA2Q01896 1091 aa3.81□□□□□ -1.8
CAF130YGR134W MMR1Q06324 491 aa3.81□□□□□ -1.8
CAF130YGR134W SOG2Q08817 791 aa3.81□□□□□ -1.8
CAF130YGR134W ENA5Q12691 1091 aa3.81□□□□□ -1.8
CAF130YGR134W STH1P32597 1359 aa3.81□□□□□ -1.8
CAF130YGR134W FBP1P09201 348 aa3.81□□□□□ -1.8
CAF130YGR134W FUR1P18562 216 aaKnown RBP3.81□□□□□ -1.8
CAF130YGR134W MSH1P25846 959 aa3.81□□□□□ -1.8
CAF130YGR134W SPC110P32380 944 aa3.81□□□□□ -1.8
CAF130YGR134W SEC61P32915 480 aa3.81□□□□□ -1.8
CAF130YGR134W NIP100P33420 868 aa3.81□□□□□ -1.8
CAF130YGR134W ATG19P35193 415 aa3.81□□□□□ -1.8
CAF130YGR134W SWH1P35845 1188 aa3.81□□□□□ -1.8
CAF130YGR134W YKR078WP36158 585 aaKnown RBP3.81□□□□□ -1.8
CAF130YGR134W GID8P40208 455 aa3.81□□□□□ -1.8
CAF130YGR134W TCB2P48231 1178 aa3.81□□□□□ -1.8
CAF130YGR134W HFM1P51979 1187 aa3.81□□□□□ -1.8
CAF130YGR134W CBK1P53894 756 aa3.81□□□□□ -1.8
CAF130YGR134W NOP15P53927 220 aaPredicted RBP3.81□□□□□ -1.8
CAF130YGR134W YSA1Q01976 231 aa3.81□□□□□ -1.8
CAF130YGR134W HAS1Q03532 505 aaKnown RBP3.81□□□□□ -1.8
CAF130YGR134W UFO1Q04511 668 aa3.81□□□□□ -1.8
CAF130YGR134W NGL1Q08213 363 aaKnown RBP3.81□□□□□ -1.8
CAF130YGR134W SPT7P35177 1332 aa3.81□□□□□ -1.8
CAF130YGR134W TSC11P40061 1430 aa3.81□□□□□ -1.8
CAF130YGR134W HSL7P38274 827 aa3.8□□□□□ -1.8
CAF130YGR134W LYS9P38999 446 aa3.8□□□□□ -1.8
CAF130YGR134W SHE4P51534 789 aa3.8□□□□□ -1.8
CAF130YGR134W RCR2Q03446 210 aaKnown RBP3.8□□□□□ -1.8
CAF130YGR134W DUS3Q06053 668 aaKnown RBP3.8□□□□□ -1.8
CAF130YGR134W YOR059CQ08448 450 aaKnown RBP3.8□□□□□ -1.8
CAF130YGR134W NUP159P40477 1460 aa3.8□□□□□ -1.8
CAF130YGR134W CWH43P25618 953 aa3.8□□□□□ -1.8
CAF130YGR134W YME1P32795 747 aa3.8□□□□□ -1.8
CAF130YGR134W GCS1P35197 352 aa3.8□□□□□ -1.8
CAF130YGR134W SPT23P35210 1082 aa3.8□□□□□ -1.8
CAF130YGR134W ARL1P38116 183 aaKnown RBP3.8□□□□□ -1.8
CAF130YGR134W RFC3P38629 340 aa3.8□□□□□ -1.8
CAF130YGR134W GIC1P38785 314 aa3.8□□□□□ -1.8
CAF130YGR134W SCS2P40075 244 aaKnown RBP3.8□□□□□ -1.8
CAF130YGR134W YTA6P40328 754 aa3.8□□□□□ -1.8
CAF130YGR134W DAM1P53267 343 aa3.8□□□□□ -1.8
CAF130YGR134W DBP9Q06218 594 aaKnown RBP3.8□□□□□ -1.8
CAF130YGR134W YPS7Q06325 596 aa3.8□□□□□ -1.8
CAF130YGR134W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
CAF130YGR134W PAR32Q12515 295 aaKnown RBP3.8□□□□□ -1.8
CAF130YGR134W ENT1Q12518 454 aa3.8□□□□□ -1.8
CAF130YGR134W GYP6P32806 458 aa3.8□□□□□ -1.8
CAF130YGR134W CAB3P36076 571 aa3.8□□□□□ -1.8
CAF130YGR134W YHR131CP38835 850 aa3.8□□□□□ -1.8
CAF130YGR134W BUD16P39988 312 aa3.8□□□□□ -1.8
CAF130YGR134W GYP7P48365 746 aa3.8□□□□□ -1.8
CAF130YGR134W PTA1Q01329 785 aaPredicted RBP3.8□□□□□ -1.8
CAF130YGR134W SWA2Q06677 668 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms