RNA–Protein interactions for RNA: YGR063C

SPT4, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT4, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT4YGR063C VPS64Q03944 604 aa3.61□□□□□ -1.83
SPT4YGR063C RRP17Q04031 235 aaPredicted RBP3.61□□□□□ -1.83
SPT4YGR063C YMR114CQ04471 368 aaKnown RBP3.61□□□□□ -1.83
SPT4YGR063C RNH1Q04740 348 aa3.61□□□□□ -1.83
SPT4YGR063C YCS4Q06156 1176 aa3.61□□□□□ -1.83
SPT4YGR063C YDR306CQ06640 478 aa3.61□□□□□ -1.83
SPT4YGR063C LAM6Q08001 693 aa3.61□□□□□ -1.83
SPT4YGR063C BRX1Q08235 291 aaKnown RBP3.61□□□□□ -1.83
SPT4YGR063C SNX3Q08826 162 aaKnown RBP3.61□□□□□ -1.83
SPT4YGR063C RCN2Q12044 265 aa3.61□□□□□ -1.83
SPT4YGR063C YDL109CQ12103 647 aa3.61□□□□□ -1.83
SPT4YGR063C HUA2Q12134 243 aa3.61□□□□□ -1.83
SPT4YGR063C MNL2Q12205 849 aa3.61□□□□□ -1.83
SPT4YGR063C YPT6Q99260 215 aa3.61□□□□□ -1.83
SPT4YGR063C CHO2P05374 869 aaKnown RBP3.6□□□□□ -1.83
SPT4YGR063C TUB3P09734 445 aaKnown RBP3.6□□□□□ -1.83
SPT4YGR063C SSB1P11484 613 aaKnown RBP3.6□□□□□ -1.83
SPT4YGR063C MRP13P12686 339 aa3.6□□□□□ -1.83
SPT4YGR063C MRP7P12687 371 aa3.6□□□□□ -1.83
SPT4YGR063C PEP5P12868 1029 aa3.6□□□□□ -1.83
SPT4YGR063C CLN3P13365 580 aa3.6□□□□□ -1.83
SPT4YGR063C PMS1P14242 873 aa3.6□□□□□ -1.83
SPT4YGR063C TRM1P15565 570 aaKnown RBP3.6□□□□□ -1.83
SPT4YGR063C HXT2P23585 541 aa3.6□□□□□ -1.83
SPT4YGR063C LCB1P25045 558 aaKnown RBP3.6□□□□□ -1.83
SPT4YGR063C PDC6P26263 563 aaKnown RBP3.6□□□□□ -1.83
SPT4YGR063C MEI4P29467 408 aa3.6□□□□□ -1.83
SPT4YGR063C CRM1P30822 1084 aaKnown RBP3.6□□□□□ -1.83
SPT4YGR063C MLS1P30952 554 aa3.6□□□□□ -1.83
SPT4YGR063C ZIP1P31111 875 aa3.6□□□□□ -1.83
SPT4YGR063C TPS2P31688 896 aaKnown RBP3.6□□□□□ -1.83
SPT4YGR063C SAC6P32599 642 aaKnown RBP3.6□□□□□ -1.83
SPT4YGR063C AFR1P33304 620 aa3.6□□□□□ -1.83
SPT4YGR063C ATG19P35193 415 aa3.6□□□□□ -1.83
SPT4YGR063C TEF4P36008 412 aaKnown RBP3.6□□□□□ -1.83
SPT4YGR063C SET3P36124 751 aa3.6□□□□□ -1.83
SPT4YGR063C MRPL17P36528 281 aa3.6□□□□□ -1.83
SPT4YGR063C SDH8P38345 138 aa3.6□□□□□ -1.83
SPT4YGR063C DYS1P38791 387 aa3.6□□□□□ -1.83
SPT4YGR063C STM1P39015 273 aaKnown RBP3.6□□□□□ -1.83
SPT4YGR063C RGA1P39083 1007 aa3.6□□□□□ -1.83
SPT4YGR063C GDH3P39708 457 aa3.6□□□□□ -1.83
SPT4YGR063C YER034WP40022 185 aaKnown RBP3.6□□□□□ -1.83
SPT4YGR063C SSB2P40150 613 aaKnown RBP3.6□□□□□ -1.83
SPT4YGR063C YJL070CP40361 888 aa3.6□□□□□ -1.83
SPT4YGR063C MNT3P40549 630 aa3.6□□□□□ -1.83
SPT4YGR063C AIP1P46680 615 aaKnown RBP3.6□□□□□ -1.83
SPT4YGR063C NMD5P46970 1048 aa3.6□□□□□ -1.83
SPT4YGR063C YJL171CP46992 396 aa3.6□□□□□ -1.83
SPT4YGR063C EMC2P47133 292 aaKnown RBP3.6□□□□□ -1.83
SPT4YGR063C YGR122WP53272 402 aa3.6□□□□□ -1.83
SPT4YGR063C MRPL50P53724 139 aa3.6□□□□□ -1.83
SPT4YGR063C ALO1P54783 526 aaKnown RBP3.6□□□□□ -1.83
SPT4YGR063C SLT2Q00772 484 aa3.6□□□□□ -1.83
SPT4YGR063C UBP2Q01476 1272 aa3.6□□□□□ -1.83
SPT4YGR063C OSH6Q02201 448 aa3.6□□□□□ -1.83
SPT4YGR063C SHR3Q02774 210 aa3.6□□□□□ -1.83
SPT4YGR063C UME1Q03010 460 aa3.6□□□□□ -1.83
SPT4YGR063C YPL034WQ03083 165 aa3.6□□□□□ -1.83
SPT4YGR063C EBS1Q03466 884 aaKnown RBP3.6□□□□□ -1.83
SPT4YGR063C SMP3Q04174 516 aa3.6□□□□□ -1.83
SPT4YGR063C YMR018WQ04364 514 aa3.6□□□□□ -1.83
SPT4YGR063C ARP9Q05123 467 aa3.6□□□□□ -1.83
SPT4YGR063C ENT2Q05785 613 aa3.6□□□□□ -1.83
SPT4YGR063C RGA2Q06407 1009 aa3.6□□□□□ -1.83
SPT4YGR063C MLC2Q06580 163 aa3.6□□□□□ -1.83
SPT4YGR063C YPR196WQ06595 470 aa3.6□□□□□ -1.83
SPT4YGR063C DTD1Q07648 150 aaKnown RBP3.6□□□□□ -1.83
SPT4YGR063C BRE4Q07660 1125 aa3.6□□□□□ -1.83
SPT4YGR063C YLR001CQ07895 862 aa3.6□□□□□ -1.83
SPT4YGR063C GAS4Q08271 471 aa3.6□□□□□ -1.83
SPT4YGR063C GYP1Q08484 637 aa3.6□□□□□ -1.83
SPT4YGR063C ALE1Q08548 619 aa3.6□□□□□ -1.83
SPT4YGR063C SPE3Q12074 293 aaKnown RBP3.6□□□□□ -1.83
SPT4YGR063C BMT6Q12291 365 aa3.6□□□□□ -1.83
SPT4YGR063C ZRT2Q12436 422 aa3.6□□□□□ -1.83
SPT4YGR063C YIL002W-AQ3E7Z5 69 aa3.6□□□□□ -1.83
SPT4YGR063C YRF1-1P0CX20 1796 aa3.59□□□□□ -1.83
SPT4YGR063C YRF1-5P0CX21 1796 aa3.59□□□□□ -1.83
SPT4YGR063C YRF1-8P0CX22 1796 aa3.59□□□□□ -1.83
SPT4YGR063C MF(ALPHA)1P01149 165 aa3.59□□□□□ -1.83
SPT4YGR063C ILV2P07342 687 aaKnown RBP3.59□□□□□ -1.83
SPT4YGR063C SPS1P08458 490 aa3.59□□□□□ -1.83
SPT4YGR063C MSD1P15179 658 aaKnown RBP3.59□□□□□ -1.83
SPT4YGR063C POL3P15436 1097 aa3.59□□□□□ -1.83
SPT4YGR063C CKA2P19454 339 aa3.59□□□□□ -1.83
SPT4YGR063C EXO70P19658 623 aa3.59□□□□□ -1.83
SPT4YGR063C DBP3P20447 523 aaKnown RBP3.59□□□□□ -1.83
SPT4YGR063C DBP5P20449 482 aaKnown RBP3.59□□□□□ -1.83
SPT4YGR063C DBF2P22204 572 aa3.59□□□□□ -1.83
SPT4YGR063C CMK2P22517 447 aa3.59□□□□□ -1.83
SPT4YGR063C GBP2P25555 427 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
SPT4YGR063C PAT1P25644 796 aaKnown RBP3.59□□□□□ -1.83
SPT4YGR063C PTR2P32901 601 aa3.59□□□□□ -1.83
SPT4YGR063C PXA2P34230 853 aa3.59□□□□□ -1.83
SPT4YGR063C YPK3P38070 525 aa3.59□□□□□ -1.83
SPT4YGR063C RDH54P38086 958 aa3.59□□□□□ -1.83
SPT4YGR063C MMS21P38632 267 aa3.59□□□□□ -1.83
SPT4YGR063C YHR218WP38899 603 aa3.59□□□□□ -1.83
SPT4YGR063C MSS4P38994 779 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms