RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeastyeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS72YDR485C SAP190P36123 1033 aa6.29□□□□□ -1.4
VPS72YDR485C UME6P39001 836 aa6.29□□□□□ -1.4
VPS72YDR485C PIK1P39104 1066 aa6.29□□□□□ -1.4
VPS72YDR485C SSP120P39931 234 aaKnown RBP6.29□□□□□ -1.4
VPS72YDR485C ACS1Q01574 713 aa6.29□□□□□ -1.4
VPS72YDR485C YKR011CQ02209 353 aa6.29□□□□□ -1.4
VPS72YDR485C RMT2Q03305 412 aa6.29□□□□□ -1.4
VPS72YDR485C NFI1Q12216 726 aa6.29□□□□□ -1.4
VPS72YDR485C RRP36Q12481 300 aaPredicted RBP6.29□□□□□ -1.4
VPS72YDR485C AMS1P22855 1083 aa6.28□□□□□ -1.4
VPS72YDR485C YCK2P23292 546 aaKnown RBP6.28□□□□□ -1.4
VPS72YDR485C RIT1P23796 513 aa6.28□□□□□ -1.4
VPS72YDR485C MIP6P38760 659 aaKnown RBP6.28□□□□□ -1.4
VPS72YDR485C YEL025CP39991 1188 aa6.28□□□□□ -1.4
VPS72YDR485C ARF3P40994 183 aaRIP-Chip data6.28□□□□□ -1.4 RIP-Chip
VPS72YDR485C LSC2P53312 427 aa6.28□□□□□ -1.4
VPS72YDR485C NCS2P53923 493 aaPredicted RBP6.28□□□□□ -1.4
VPS72YDR485C YML119WQ03208 357 aa6.28□□□□□ -1.4
VPS72YDR485C NGL3Q03210 505 aa6.28□□□□□ -1.4
VPS72YDR485C FCP1Q03254 732 aa6.28□□□□□ -1.4
VPS72YDR485C SFI1Q12369 946 aa6.28□□□□□ -1.4
VPS72YDR485C GRX6Q12438 231 aa6.28□□□□□ -1.4
VPS72YDR485C PRC1P00729 532 aa6.28□□□□□ -1.4
VPS72YDR485C NOT3P06102 836 aaKnown RBP6.28□□□□□ -1.4
VPS72YDR485C POT1P27796 417 aaKnown RBP RIP-Chip data6.28□□□□□ -1.4not detected
VPS72YDR485C PRM2P40534 656 aa6.28□□□□□ -1.4
VPS72YDR485C YJL055WP47044 245 aa6.28□□□□□ -1.4
VPS72YDR485C IMA1P53051 589 aa6.28□□□□□ -1.4
VPS72YDR485C ELG1Q12050 791 aa6.28□□□□□ -1.4
VPS72YDR485C GPR1Q12361 961 aa6.28□□□□□ -1.4
VPS72YDR485C THR1P17423 357 aaKnown RBP6.27□□□□□ -1.41
VPS72YDR485C REC107P21651 314 aa6.27□□□□□ -1.41
VPS72YDR485C TRX1P22217 103 aaKnown RBP6.27□□□□□ -1.41
VPS72YDR485C STE50P25344 346 aa6.27□□□□□ -1.41
VPS72YDR485C MAC1P35192 417 aa6.27□□□□□ -1.41
VPS72YDR485C TEF4P36008 412 aaKnown RBP6.27□□□□□ -1.41
VPS72YDR485C YJR061WP40355 935 aa6.27□□□□□ -1.41
VPS72YDR485C DSD1P53095 428 aa6.27□□□□□ -1.41
VPS72YDR485C VPS9P54787 451 aa6.27□□□□□ -1.41
VPS72YDR485C AAD4Q07747 329 aa6.27□□□□□ -1.41
VPS72YDR485C YPL277CQ08989 487 aa6.27□□□□□ -1.41
VPS72YDR485C ISA2Q12425 185 aa6.27□□□□□ -1.41
VPS72YDR485C MTC7P32633 139 aa6.26□□□□□ -1.41
VPS72YDR485C ECM21P38167 1117 aaKnown RBP6.26□□□□□ -1.41
VPS72YDR485C SEC28P40509 296 aaKnown RBP6.26□□□□□ -1.41
VPS72YDR485C LCB2P40970 561 aa6.26□□□□□ -1.41
VPS72YDR485C RSB1Q08417 382 aa6.26□□□□□ -1.41
VPS72YDR485C LCB1P25045 558 aaKnown RBP6.26□□□□□ -1.41
VPS72YDR485C GCS1P35197 352 aa6.26□□□□□ -1.41
VPS72YDR485C TAF5P38129 798 aa6.26□□□□□ -1.41
VPS72YDR485C PSD1P39006 500 aa6.26□□□□□ -1.41
VPS72YDR485C PEX25Q02969 394 aa6.26□□□□□ -1.41
VPS72YDR485C ECM22Q05958 814 aaPredicted RBP6.26□□□□□ -1.41
VPS72YDR485C CEX1Q12453 761 aa6.26□□□□□ -1.41
VPS72YDR485C MRP20P32387 263 aa6.25□□□□□ -1.41
VPS72YDR485C POA1P38218 177 aa6.25□□□□□ -1.41
VPS72YDR485C TED1P40533 473 aa6.25□□□□□ -1.41
VPS72YDR485C BST1P43571 1029 aa6.25□□□□□ -1.41
VPS72YDR485C GPD1Q00055 391 aaKnown RBP6.25□□□□□ -1.41
VPS72YDR485C TRI1Q05024 226 aa6.25□□□□□ -1.41
VPS72YDR485C CTI6Q08923 506 aa6.25□□□□□ -1.41
VPS72YDR485C TGL5Q12043 749 aa6.25□□□□□ -1.41
VPS72YDR485C GET3Q12154 354 aaKnown RBP6.25□□□□□ -1.41
VPS72YDR485C PDH1Q12428 516 aaKnown RBP6.25□□□□□ -1.41
VPS72YDR485C URA3P03962 267 aa6.25□□□□□ -1.41
VPS72YDR485C BIK1P11709 440 aa6.25□□□□□ -1.41
VPS72YDR485C CMP2P14747 604 aa6.25□□□□□ -1.41
VPS72YDR485C ARP2P32381 391 aaKnown RBP6.25□□□□□ -1.41
VPS72YDR485C YEL057CP39983 233 aa6.25□□□□□ -1.41
VPS72YDR485C UBP7P40453 1071 aa6.25□□□□□ -1.41
VPS72YDR485C RRT14P40470 206 aa6.25□□□□□ -1.41
VPS72YDR485C NAS2P40555 220 aa6.25□□□□□ -1.41
VPS72YDR485C SKP2P42843 763 aa6.25□□□□□ -1.41
VPS72YDR485C PSP2P50109 593 aaKnown RBP6.25□□□□□ -1.41
VPS72YDR485C YMR210WQ03649 449 aa6.25□□□□□ -1.41
VPS72YDR485C SSL1Q04673 461 aaPredicted RBP6.25□□□□□ -1.41
VPS72YDR485C YMR074CQ04773 145 aa6.25□□□□□ -1.41
VPS72YDR485C ASM4Q05166 528 aa6.25□□□□□ -1.41
VPS72YDR485C NMD4Q12129 218 aa6.25□□□□□ -1.41
VPS72YDR485C COX17Q12287 69 aa6.25□□□□□ -1.41
VPS72YDR485C ZRT2Q12436 422 aa6.25□□□□□ -1.41
VPS72YDR485C ATG11Q12527 1178 aa6.25□□□□□ -1.41
VPS72YDR485C ISN1Q99312 450 aa6.25□□□□□ -1.41
VPS72YDR485C ARG1P22768 420 aa6.24□□□□□ -1.41
VPS72YDR485C TFB1P32776 642 aa6.24□□□□□ -1.41
VPS72YDR485C TYE7P33122 291 aaPredicted RBP6.24□□□□□ -1.41
VPS72YDR485C YKR075CP36155 307 aa6.24□□□□□ -1.41
VPS72YDR485C ALT1P52893 592 aa6.24□□□□□ -1.41
VPS72YDR485C NNF2P53253 936 aa6.24□□□□□ -1.41
VPS72YDR485C ENT4Q07872 247 aa6.24□□□□□ -1.41
VPS72YDR485C FRE6Q12473 712 aa6.24□□□□□ -1.41
VPS72YDR485C STF1P01098 86 aa6.24□□□□□ -1.41
VPS72YDR485C TUB2P02557 457 aaKnown RBP6.24□□□□□ -1.41
VPS72YDR485C RPB2P08518 1224 aaKnown RBP6.24□□□□□ -1.41
VPS72YDR485C PRP22P24384 1145 aaKnown RBP6.24□□□□□ -1.41
VPS72YDR485C SRO9P25567 434 aaKnown RBP6.24□□□□□ -1.41
VPS72YDR485C PUP2P32379 260 aa6.24□□□□□ -1.41
VPS72YDR485C CNS1P33313 385 aa6.24□□□□□ -1.41
VPS72YDR485C NNK1P36003 928 aa6.24□□□□□ -1.41
VPS72YDR485C UTP9P38882 575 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms