RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W RPN3P40016 523 aaKnown RBP3.66□□□□□ -1.82
NUP60YAR002W ULP2P40537 1034 aaPredicted RBP3.66□□□□□ -1.82
NUP60YAR002W YGL176CP46945 554 aa3.66□□□□□ -1.82
NUP60YAR002W TAD1P53065 400 aa3.66□□□□□ -1.82
NUP60YAR002W TOF1P53840 1238 aa3.66□□□□□ -1.82
NUP60YAR002W NAN1Q02931 896 aaKnown RBP3.66□□□□□ -1.82
NUP60YAR002W EAR1Q03212 550 aa3.66□□□□□ -1.82
NUP60YAR002W GIR2Q03768 265 aaPredicted RBP3.66□□□□□ -1.82
NUP60YAR002W PHM6Q05637 104 aa3.66□□□□□ -1.82
NUP60YAR002W SPH1Q06160 661 aa3.66□□□□□ -1.82
NUP60YAR002W ATG23Q06671 453 aa3.66□□□□□ -1.82
NUP60YAR002W GUD1Q07729 489 aa3.66□□□□□ -1.82
NUP60YAR002W YLR001CQ07895 862 aa3.66□□□□□ -1.82
NUP60YAR002W DAS2Q12084 232 aa3.66□□□□□ -1.82
NUP60YAR002W YLR122CQ12312 125 aa3.66□□□□□ -1.82
NUP60YAR002W NSI1Q12457 570 aa3.66□□□□□ -1.82
NUP60YAR002W FKS1P38631 1876 aaKnown RBP3.65□□□□□ -1.83
NUP60YAR002W FBP1P09201 348 aa3.65□□□□□ -1.83
NUP60YAR002W SBP1P10080 294 aaKnown RBP3.65□□□□□ -1.83
NUP60YAR002W SAM1P10659 382 aaKnown RBP3.65□□□□□ -1.83
NUP60YAR002W RPO26P20435 155 aa3.65□□□□□ -1.83
NUP60YAR002W PER1P25625 357 aa3.65□□□□□ -1.83
NUP60YAR002W YSC84P32793 468 aa3.65□□□□□ -1.83
NUP60YAR002W YEL1P34225 687 aa3.65□□□□□ -1.83
NUP60YAR002W BYE1P36106 594 aa3.65□□□□□ -1.83
NUP60YAR002W JNM1P36224 373 aa3.65□□□□□ -1.83
NUP60YAR002W SEA4P38164 1038 aa3.65□□□□□ -1.83
NUP60YAR002W YMR124WP39523 943 aaKnown RBP3.65□□□□□ -1.83
NUP60YAR002W SDS3P40505 327 aa3.65□□□□□ -1.83
NUP60YAR002W FIS1P40515 155 aa3.65□□□□□ -1.83
NUP60YAR002W TNA1P53322 534 aa3.65□□□□□ -1.83
NUP60YAR002W ARK1P53974 638 aa3.65□□□□□ -1.83
NUP60YAR002W PTA1Q01329 785 aaPredicted RBP3.65□□□□□ -1.83
NUP60YAR002W CUR1Q06469 252 aa3.65□□□□□ -1.83
NUP60YAR002W GIN4Q12263 1142 aa3.65□□□□□ -1.83
NUP60YAR002W YVC1Q12324 675 aa3.65□□□□□ -1.83
NUP60YAR002W OSH2Q12451 1283 aa3.65□□□□□ -1.83
NUP60YAR002W YKL068W-AQ3E826 78 aa3.65□□□□□ -1.83
NUP60YAR002W TY1B-AO13527 1196 aaKnown RBP3.64□□□□□ -1.83
NUP60YAR002W YER152CP10356 443 aa3.64□□□□□ -1.83
NUP60YAR002W PHO8P11491 566 aa3.64□□□□□ -1.83
NUP60YAR002W TCP1P12612 559 aaKnown RBP3.64□□□□□ -1.83
NUP60YAR002W PAP1P29468 568 aaKnown RBP3.64□□□□□ -1.83
NUP60YAR002W CNS1P33313 385 aa3.64□□□□□ -1.83
NUP60YAR002W OCT1P35999 772 aa3.64□□□□□ -1.83
NUP60YAR002W MCR1P36060 302 aaKnown RBP3.64□□□□□ -1.83
NUP60YAR002W YKL023WP36103 277 aaKnown RBP3.64□□□□□ -1.83
NUP60YAR002W VBA5P36172 582 aa3.64□□□□□ -1.83
NUP60YAR002W UBP13P38187 747 aa3.64□□□□□ -1.83
NUP60YAR002W SET5P38890 526 aaKnown RBP3.64□□□□□ -1.83
NUP60YAR002W GPB2P39717 880 aa3.64□□□□□ -1.83
NUP60YAR002W IRR1P40541 1150 aa3.64□□□□□ -1.83
NUP60YAR002W LCB2P40970 561 aa3.64□□□□□ -1.83
NUP60YAR002W COS5P47187 383 aa3.64□□□□□ -1.83
NUP60YAR002W CTR1P49573 406 aa3.64□□□□□ -1.83
NUP60YAR002W YGL039WP53183 348 aaKnown RBP3.64□□□□□ -1.83
NUP60YAR002W BTN2P53286 410 aa3.64□□□□□ -1.83
NUP60YAR002W NCS2P53923 493 aaPredicted RBP3.64□□□□□ -1.83
NUP60YAR002W POB3Q04636 552 aaKnown RBP3.64□□□□□ -1.83
NUP60YAR002W YLR297WQ05899 129 aa3.64□□□□□ -1.83
NUP60YAR002W DUS3Q06053 668 aaKnown RBP3.64□□□□□ -1.83
NUP60YAR002W UBX5Q06682 500 aa3.64□□□□□ -1.83
NUP60YAR002W TSR1Q07381 788 aaKnown RBP3.64□□□□□ -1.83
NUP60YAR002W CRD1Q07560 283 aa3.64□□□□□ -1.83
NUP60YAR002W MLH2Q07980 695 aa3.64□□□□□ -1.83
NUP60YAR002W SIL1Q08199 421 aa3.64□□□□□ -1.83
NUP60YAR002W YPL066WQ12194 479 aa3.64□□□□□ -1.83
NUP60YAR002W RMP1Q12530 201 aa3.64□□□□□ -1.83
NUP60YAR002W SWI6P09959 803 aa3.63□□□□□ -1.83
NUP60YAR002W GFA1P14742 717 aaKnown RBP3.63□□□□□ -1.83
NUP60YAR002W YSC83P32792 385 aa3.63□□□□□ -1.83
NUP60YAR002W SHP1P34223 423 aa3.63□□□□□ -1.83
NUP60YAR002W YKR018CP36114 725 aa3.63□□□□□ -1.83
NUP60YAR002W YHL012WP38709 493 aa3.63□□□□□ -1.83
NUP60YAR002W TAT2P38967 592 aa3.63□□□□□ -1.83
NUP60YAR002W VAB2P40003 282 aa3.63□□□□□ -1.83
NUP60YAR002W PEA2P40091 420 aa3.63□□□□□ -1.83
NUP60YAR002W HUL5P53119 910 aa3.63□□□□□ -1.83
NUP60YAR002W YGR021WP53212 290 aa3.63□□□□□ -1.83
NUP60YAR002W ZPR1P53303 486 aaKnown RBP3.63□□□□□ -1.83
NUP60YAR002W ESBP6P53918 673 aa3.63□□□□□ -1.83
NUP60YAR002W YMR114CQ04471 368 aaKnown RBP3.63□□□□□ -1.83
NUP60YAR002W CSR1Q06705 408 aaKnown RBP3.63□□□□□ -1.83
NUP60YAR002W ISA1Q07821 250 aaPredicted RBP3.63□□□□□ -1.83
NUP60YAR002W RLP24Q07915 199 aaKnown RBP3.63□□□□□ -1.83
NUP60YAR002W ERG11P10614 530 aa3.62□□□□□ -1.83
NUP60YAR002W UTR4P32626 227 aa3.62□□□□□ -1.83
NUP60YAR002W NFU1P32860 256 aa3.62□□□□□ -1.83
NUP60YAR002W ATG19P35193 415 aa3.62□□□□□ -1.83
NUP60YAR002W BAP2P38084 609 aa3.62□□□□□ -1.83
NUP60YAR002W YBR184WP38299 523 aa3.62□□□□□ -1.83
NUP60YAR002W TDA3P38758 523 aa3.62□□□□□ -1.83
NUP60YAR002W SGM1P47166 707 aa3.62□□□□□ -1.83
NUP60YAR002W KAP114P53067 1004 aa3.62□□□□□ -1.83
NUP60YAR002W YGR130CP53278 816 aa3.62□□□□□ -1.83
NUP60YAR002W CWC22P53333 577 aaKnown RBP3.62□□□□□ -1.83
NUP60YAR002W TIM8P57744 87 aa3.62□□□□□ -1.83
NUP60YAR002W DON1Q05610 365 aa3.62□□□□□ -1.83
NUP60YAR002W NOP6Q07623 225 aaKnown RBP3.62□□□□□ -1.83
NUP60YAR002W TRE1Q08919 783 aa3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms