RNA–Protein interactions for RNA: ENSMUST00000127430.1

Smchd1-201, Transcript of Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Smchd1, Length 7,052 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1-201ENSMUST00000127430 Sox13Q04891 613 aa11.27□□□□□ -0.6
Smchd1-201ENSMUST00000127430 Cnot6lQ8VEG6 555 aa11.27□□□□□ -0.6
Smchd1-201ENSMUST00000127430 Cul5Q9D5V5 780 aa11.27□□□□□ -0.6
Smchd1-201ENSMUST00000127430 Zcchc17Q9ESX4 241 aaKnown RBP11.27□□□□□ -0.6
Smchd1-201ENSMUST00000127430 Ift81O35594 676 aa11.27□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Nlrp4cQ3TKR3 982 aa11.27□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Elf1Q60775 612 aa11.27□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Tbc1d5Q80XQ2 815 aa11.27□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Kif2bQ8C0N1 668 aa11.27□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Ttc1Q91Z38 292 aa11.27□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Ak2Q9WTP6 239 aa11.27□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Ifit2Q64112 472 aa11.27□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Clip2Q9Z0H8 1047 aa11.27□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Sh2d4bA6X942 431 aa11.27□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Pde6aP27664 859 aa11.27□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Nsrp1Q5NCR9 542 aa11.27□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Fermt2Q8CIB5 680 aa11.27□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Trove2O08848 538 aa11.27□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Trim35Q8C006 501 aa11.27□□□□□ -0.61
Smchd1-201ENSMUST00000127430 NgdnQ9DB96 315 aaKnown RBP11.27□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Sclt1G5E861 688 aa11.26□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Caprin2Q05A80 1031 aaKnown RBP11.26□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Cnnm2Q3TWN3 875 aa11.26□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Ubash3aQ3V3E1 624 aa11.26□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Filip1Q9CS72 1211 aa11.26□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Gipc2Q9Z2H7 314 aa11.26□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Mroh7A2AVR2 1279 aa11.26□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Pde4bB1AWC9 736 aa11.26□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Stx8O88983 236 aa11.26□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Gsta4P24472 222 aa11.26□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Basp1Q91XV3 226 aa11.26□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Pik3c2gO70167 1506 aa11.26□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Pak2Q8CIN4 524 aa11.26□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Nop56Q9D6Z1 580 aaKnown RBP11.26□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Kdm3aQ6PCM1 1323 aa11.26□□□□□ -0.61
Smchd1-201ENSMUST00000127430 EmbP21995 330 aa11.26□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Zap70P43404 618 aa11.26□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Eef2P58252 858 aaKnown RBP11.26□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Ranbp6Q8BIV3 1105 aa11.26□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Krt222Q8CCX5 294 aa11.26□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Tcerg1lQ3B807 590 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Tshz1Q5DTH5 1084 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Aldh1l2Q8K009 923 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Atad3Q925I1 591 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Slc24a3Q99PD7 645 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Cfap100Q80VN0 613 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Traf3ip3Q8C0G2 513 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Actn3O88990 900 aaKnown RBP11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Bach1P97302 739 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 EnahQ03173 802 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Zfp51Q3U4L8 781 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Sept3Q9Z1S5 350 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Ppp1r1bQ60829 194 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Cct6bQ61390 531 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Csrnp2Q8BGQ2 534 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Nek11Q8C0Q4 628 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Terf2ipQ91VL8 393 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Bmp2kQ91Z96 1138 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Golga1Q9CW79 758 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Stk11Q9WTK7 436 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Ppp2r3dQ9Z176 491 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Znf394Q9Z1D9 521 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Gucy1b3O54865 620 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Zbtb38Q3LR78 1197 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Sash1P59808 1230 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Slc8a1P70414 970 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Spout1Q3UHX9 385 aaKnown RBP11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Serpinb1cQ5SV42 375 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Nop9Q8BMC4 636 aaKnown RBP11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Abcc5Q9R1X5 1436 aa11.25□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Atp2a2O55143 1044 aaKnown RBP11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Cep128Q8BI22 1102 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Q8BZJ8 459 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Efcc1Q9JJF6 558 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Pde3aQ9Z0X4 1141 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Neurog2P70447 263 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 P2rx5Q3UYI1 455 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Msl1Q6PDM1 616 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Becn2P0DM65 447 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Wdr91Q7TMQ7 748 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 RbsnQ80Y56 783 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Tcp11l1Q8BTG3 509 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 CrebzfQ91ZR3 358 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 SyncQ9EPM5 470 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Speer4dL7N216 212 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Myd88P22366 296 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 MarcksP26645 309 aaKnown RBP11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Evi5P97366 809 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Taok1Q5F2E8 1001 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Efhd1Q9D4J1 240 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Xpo4Q9ESJ0 1151 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Ncapd2Q8K2Z4 1392 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Znf711A2ANX9 761 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Mkl2P59759 1080 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 RilpQ5ND29 369 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Krit1Q6S5J6 736 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Kdm1aQ6ZQ88 853 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Pck1Q9Z2V4 622 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 Zmym3Q9JLM4 1370 aa11.24□□□□□ -0.61
Smchd1-201ENSMUST00000127430 ByslO54825 436 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms