RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A ARO80Q04052 950 aa8.61□□□□□ -1.03
TGA1tA(UGC)A BI2P03873 423 aa8.6□□□□□ -1.03
TGA1tA(UGC)A BI4P03879 638 aa8.6□□□□□ -1.03
TGA1tA(UGC)A RPS14AP06367 137 aaKnown RBP8.6□□□□□ -1.03
TGA1tA(UGC)A RGR1P19263 1082 aa8.6□□□□□ -1.03
TGA1tA(UGC)A SGF29P25554 259 aa8.6□□□□□ -1.03
TGA1tA(UGC)A LRE1P25579 583 aaKnown RBP8.6□□□□□ -1.03
TGA1tA(UGC)A SAP190P36123 1033 aa8.6□□□□□ -1.03
TGA1tA(UGC)A ECM13P38195 257 aa8.6□□□□□ -1.03
TGA1tA(UGC)A RPS14BP39516 138 aaKnown RBP8.6□□□□□ -1.03
TGA1tA(UGC)A CDC1P40986 491 aa8.6□□□□□ -1.03
TGA1tA(UGC)A ATH1P48016 1211 aa8.6□□□□□ -1.03
TGA1tA(UGC)A RSC1P53236 928 aa8.6□□□□□ -1.03
TGA1tA(UGC)A MDM38Q08179 573 aa8.6□□□□□ -1.03
TGA1tA(UGC)A BI3Q9ZZW7 517 aa8.6□□□□□ -1.03
TGA1tA(UGC)A REV1P12689 985 aa8.59□□□□□ -1.03
TGA1tA(UGC)A NIP100P33420 868 aa8.59□□□□□ -1.03
TGA1tA(UGC)A RPT2P40327 437 aaKnown RBP8.59□□□□□ -1.03
TGA1tA(UGC)A MMM1P41800 426 aa8.59□□□□□ -1.03
TGA1tA(UGC)A TFG2P41896 400 aaPredicted RBP8.59□□□□□ -1.03
TGA1tA(UGC)A LSB3P43603 459 aaKnown RBP8.59□□□□□ -1.03
TGA1tA(UGC)A STR2P47164 639 aa8.59□□□□□ -1.03
TGA1tA(UGC)A BIO5P53744 561 aaKnown RBP8.59□□□□□ -1.03
TGA1tA(UGC)A SFB2P53953 876 aa8.59□□□□□ -1.03
TGA1tA(UGC)A UME1Q03010 460 aa8.59□□□□□ -1.03
TGA1tA(UGC)A NSE1Q07913 336 aa8.59□□□□□ -1.03
TGA1tA(UGC)A APC5Q08683 685 aa8.59□□□□□ -1.03
TGA1tA(UGC)A MRM1P25270 412 aa8.58□□□□□ -1.04
TGA1tA(UGC)A MSH3P25336 1018 aa8.58□□□□□ -1.04
TGA1tA(UGC)A PDC6P26263 563 aaKnown RBP8.58□□□□□ -1.04
TGA1tA(UGC)A SMC1P32908 1225 aa8.58□□□□□ -1.04
TGA1tA(UGC)A EXO5P38289 585 aa8.58□□□□□ -1.04
TGA1tA(UGC)A TIF5P38431 405 aaKnown RBP8.58□□□□□ -1.04
TGA1tA(UGC)A RTT107P38850 1070 aa8.58□□□□□ -1.04
TGA1tA(UGC)A YIL161WP40449 235 aaKnown RBP8.58□□□□□ -1.04
TGA1tA(UGC)A HXT8P40886 569 aa8.58□□□□□ -1.04
TGA1tA(UGC)A PFD1P46988 109 aa8.58□□□□□ -1.04
TGA1tA(UGC)A VPS75P53853 264 aa8.58□□□□□ -1.04
TGA1tA(UGC)A MTD1Q02046 320 aaKnown RBP8.58□□□□□ -1.04
TGA1tA(UGC)A PIR3Q03180 325 aa8.58□□□□□ -1.04
TGA1tA(UGC)A AIM32Q04689 311 aa8.58□□□□□ -1.04
TGA1tA(UGC)A HMI1Q12039 706 aa8.58□□□□□ -1.04
TGA1tA(UGC)A RPS9AO13516 197 aaKnown RBP8.57□□□□□ -1.04
TGA1tA(UGC)A JIP3O13555 125 aa8.57□□□□□ -1.04
TGA1tA(UGC)A SIS1P25294 352 aaKnown RBP8.57□□□□□ -1.04
TGA1tA(UGC)A SWE1P32944 819 aa8.57□□□□□ -1.04
TGA1tA(UGC)A MPE1P35728 441 aaKnown RBP8.57□□□□□ -1.04
TGA1tA(UGC)A QNS1P38795 714 aaKnown RBP8.57□□□□□ -1.04
TGA1tA(UGC)A GYP8P43570 497 aa8.57□□□□□ -1.04
TGA1tA(UGC)A HOP2P53187 214 aa8.57□□□□□ -1.04
TGA1tA(UGC)A YDR222WQ04925 415 aa8.57□□□□□ -1.04
TGA1tA(UGC)A TAF9Q05027 157 aa8.57□□□□□ -1.04
TGA1tA(UGC)A LPX1Q12405 387 aaKnown RBP8.57□□□□□ -1.04
TGA1tA(UGC)A AEP2P22136 580 aa8.56□□□□□ -1.04
TGA1tA(UGC)A HSP78P33416 811 aa8.56□□□□□ -1.04
TGA1tA(UGC)A YBR053CP38235 358 aa8.56□□□□□ -1.04
TGA1tA(UGC)A ATG12P38316 186 aa8.56□□□□□ -1.04
TGA1tA(UGC)A NEM1P38757 446 aa8.56□□□□□ -1.04
TGA1tA(UGC)A SSP1P38871 571 aa8.56□□□□□ -1.04
TGA1tA(UGC)A DOT6P40059 670 aaKnown RBP8.56□□□□□ -1.04
TGA1tA(UGC)A TMA108P40462 946 aa8.56□□□□□ -1.04
TGA1tA(UGC)A RMD8P43620 662 aa8.56□□□□□ -1.04
TGA1tA(UGC)A STU2P46675 888 aa8.56□□□□□ -1.04
TGA1tA(UGC)A YPL014WQ02606 381 aa8.56□□□□□ -1.04
TGA1tA(UGC)A YLR287CQ05881 355 aa8.56□□□□□ -1.04
TGA1tA(UGC)A YOR387CQ08910 206 aa8.56□□□□□ -1.04
TGA1tA(UGC)A FLC1Q08967 793 aa8.56□□□□□ -1.04
TGA1tA(UGC)A NEW1Q08972 1196 aaKnown RBP8.56□□□□□ -1.04
TGA1tA(UGC)A MPD2Q99316 277 aa8.56□□□□□ -1.04
TGA1tA(UGC)A SEN1Q00416 2231 aaKnown RBP8.56□□□□□ -1.04
TGA1tA(UGC)A CCP1P00431 361 aa8.55□□□□□ -1.04
TGA1tA(UGC)A ENO2P00925 437 aaKnown RBP8.55□□□□□ -1.04
TGA1tA(UGC)A PUT4P15380 627 aa8.55□□□□□ -1.04
TGA1tA(UGC)A CBR1P38626 284 aaKnown RBP8.55□□□□□ -1.04
TGA1tA(UGC)A CHS6P40955 746 aa8.55□□□□□ -1.04
TGA1tA(UGC)A SNZ3P43545 298 aa8.55□□□□□ -1.04
TGA1tA(UGC)A YMR1P47147 688 aaKnown RBP RIP-Chip data8.55□□□□□ -1.04not detected
TGA1tA(UGC)A SNZ2P53824 298 aa8.55□□□□□ -1.04
TGA1tA(UGC)A ECM38Q05902 660 aaPredicted RBP8.55□□□□□ -1.04
TGA1tA(UGC)A EMP46Q12396 444 aa8.55□□□□□ -1.04
TGA1tA(UGC)A SPO12P17123 173 aa8.54□□□□□ -1.04
TGA1tA(UGC)A ECM32P32644 1121 aaKnown RBP8.54□□□□□ -1.04
TGA1tA(UGC)A MED6P38782 295 aa8.54□□□□□ -1.04
TGA1tA(UGC)A YNL144CP53907 740 aa8.54□□□□□ -1.04
TGA1tA(UGC)A EAF7P53911 425 aaKnown RBP8.54□□□□□ -1.04
TGA1tA(UGC)A SPG3Q04398 127 aaPredicted RBP8.54□□□□□ -1.04
TGA1tA(UGC)A RRP6Q12149 733 aaKnown RBP8.54□□□□□ -1.04
TGA1tA(UGC)A PUF2Q12221 1075 aaKnown RBP RIP-Chip data8.54□□□□□ -1.04not detected
TGA1tA(UGC)A HCM1P25364 564 aa8.53□□□□□ -1.04
TGA1tA(UGC)A GYP6P32806 458 aa8.53□□□□□ -1.04
TGA1tA(UGC)A SRB2P34162 210 aa8.53□□□□□ -1.04
TGA1tA(UGC)A HXT5P38695 592 aa8.53□□□□□ -1.04
TGA1tA(UGC)A TDA3P38758 523 aa8.53□□□□□ -1.04
TGA1tA(UGC)A YGR111WP53265 400 aa8.53□□□□□ -1.04
TGA1tA(UGC)A YNR061CP53747 219 aa8.53□□□□□ -1.04
TGA1tA(UGC)A ERG5P54781 538 aa8.53□□□□□ -1.04
TGA1tA(UGC)A TOF2Q02208 771 aa8.53□□□□□ -1.04
TGA1tA(UGC)A SEG1Q04279 960 aa8.53□□□□□ -1.04
TGA1tA(UGC)A AIM39Q08223 395 aa8.53□□□□□ -1.04
TGA1tA(UGC)A MEX67Q99257 599 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms