RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C AVT1P47082 602 aa2.5□□□□□ -2.01
ATG11YPR049C YPL014WQ02606 381 aa2.5□□□□□ -2.01
ATG11YPR049C COQ9Q05779 260 aa2.5□□□□□ -2.01
ATG11YPR049C YDL176WQ12027 708 aa2.5□□□□□ -2.01
ATG11YPR049C APM4Q99186 491 aa2.5□□□□□ -2.01
ATG11YPR049C STT4P37297 1900 aa2.5□□□□□ -2.01
ATG11YPR049C SEC15P22224 910 aa2.5□□□□□ -2.01
ATG11YPR049C STE11P23561 717 aa2.5□□□□□ -2.01
ATG11YPR049C GPD2P41911 440 aaKnown RBP2.5□□□□□ -2.01
ATG11YPR049C NRD1P53617 575 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
ATG11YPR049C TMN2Q04562 672 aa2.5□□□□□ -2.01
ATG11YPR049C RPP2AP05319 106 aaKnown RBP2.49□□□□□ -2.01
ATG11YPR049C KIP1P28742 1111 aa2.49□□□□□ -2.01
ATG11YPR049C AMN1P38285 549 aaPredicted RBP2.49□□□□□ -2.01
ATG11YPR049C ARI1P53111 347 aaKnown RBP2.49□□□□□ -2.01
ATG11YPR049C BSP1Q06604 576 aa2.49□□□□□ -2.01
ATG11YPR049C PHO4P07270 312 aaKnown RBP2.49□□□□□ -2.01
ATG11YPR049C SEC21P32074 935 aaKnown RBP2.49□□□□□ -2.01
ATG11YPR049C CEP3P40969 608 aa2.49□□□□□ -2.01
ATG11YPR049C PHM6Q05637 104 aa2.49□□□□□ -2.01
ATG11YPR049C WHI5Q12416 295 aa2.49□□□□□ -2.01
ATG11YPR049C TPK1P06244 397 aa2.48□□□□□ -2.01
ATG11YPR049C RPS14AP06367 137 aaKnown RBP2.48□□□□□ -2.01
ATG11YPR049C SUI2P20459 304 aaKnown RBP2.48□□□□□ -2.01
ATG11YPR049C DOM34P33309 386 aa2.48□□□□□ -2.01
ATG11YPR049C SEG2P34250 1132 aa2.48□□□□□ -2.01
ATG11YPR049C RFC5P38251 354 aa2.48□□□□□ -2.01
ATG11YPR049C QNS1P38795 714 aaKnown RBP2.48□□□□□ -2.01
ATG11YPR049C VPS45P38932 577 aa2.48□□□□□ -2.01
ATG11YPR049C RPS14BP39516 138 aaKnown RBP2.48□□□□□ -2.01
ATG11YPR049C FMS1P50264 508 aa2.48□□□□□ -2.01
ATG11YPR049C RSM10Q03201 203 aa2.48□□□□□ -2.01
ATG11YPR049C RMD1Q03441 430 aa2.48□□□□□ -2.01
ATG11YPR049C FUS2Q05670 677 aa2.48□□□□□ -2.01
ATG11YPR049C RSA3Q05942 220 aaKnown RBP2.48□□□□□ -2.01
ATG11YPR049C CHO2P05374 869 aaKnown RBP2.48□□□□□ -2.01
ATG11YPR049C DRE2P36152 348 aa2.48□□□□□ -2.01
ATG11YPR049C YER186CP40101 306 aa2.48□□□□□ -2.01
ATG11YPR049C CNN1P43618 361 aa2.48□□□□□ -2.01
ATG11YPR049C MLC1P53141 149 aa2.48□□□□□ -2.01
ATG11YPR049C PBP1P53297 722 aaKnown RBP2.48□□□□□ -2.01
ATG11YPR049C MNL2Q12205 849 aa2.48□□□□□ -2.01
ATG11YPR049C CIT2P08679 460 aa2.48□□□□□ -2.01
ATG11YPR049C SRO9P25567 434 aaKnown RBP2.48□□□□□ -2.01
ATG11YPR049C MET4P32389 672 aa2.48□□□□□ -2.01
ATG11YPR049C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
ATG11YPR049C TFA2P36145 328 aa2.48□□□□□ -2.01
ATG11YPR049C OCA5P38738 679 aa2.48□□□□□ -2.01
ATG11YPR049C YRB30P53107 440 aaPredicted RBP2.48□□□□□ -2.01
ATG11YPR049C RSC4Q02206 625 aa2.48□□□□□ -2.01
ATG11YPR049C UTP5Q04177 643 aaKnown RBP2.48□□□□□ -2.01
ATG11YPR049C TY1A-NL1Q12391 440 aaKnown RBP2.48□□□□□ -2.01
ATG11YPR049C YIL046W-AQ3E7Z4 54 aa2.48□□□□□ -2.01
ATG11YPR049C NOT3P06102 836 aaKnown RBP2.47□□□□□ -2.01
ATG11YPR049C ZRG8P40021 1076 aa2.47□□□□□ -2.01
ATG11YPR049C VID28P40547 921 aa2.47□□□□□ -2.01
ATG11YPR049C SFB2P53953 876 aa2.47□□□□□ -2.01
ATG11YPR049C HOS3Q02959 697 aaKnown RBP2.47□□□□□ -2.01
ATG11YPR049C PLP2Q12017 286 aa2.47□□□□□ -2.01
ATG11YPR049C YOR022CQ12204 715 aa2.47□□□□□ -2.01
ATG11YPR049C YLR122CQ12312 125 aa2.47□□□□□ -2.01
ATG11YPR049C RRI2Q12348 645 aa2.47□□□□□ -2.01
ATG11YPR049C CMR1Q12510 522 aaKnown RBP2.47□□□□□ -2.01
ATG11YPR049C PGK1P00560 416 aaKnown RBP2.47□□□□□ -2.01
ATG11YPR049C GAL4P04386 881 aa2.47□□□□□ -2.01
ATG11YPR049C ANP1P32629 500 aa2.47□□□□□ -2.01
ATG11YPR049C TFB1P32776 642 aa2.47□□□□□ -2.01
ATG11YPR049C CCT3P39077 534 aaKnown RBP2.47□□□□□ -2.01
ATG11YPR049C MAF1P41910 395 aa2.47□□□□□ -2.01
ATG11YPR049C GYP8P43570 497 aa2.47□□□□□ -2.01
ATG11YPR049C CIT1P00890 479 aa2.47□□□□□ -2.01
ATG11YPR049C AI3P03877 415 aa2.47□□□□□ -2.01
ATG11YPR049C HXK1P04806 485 aaKnown RBP2.47□□□□□ -2.01
ATG11YPR049C CYC8P14922 966 aa2.47□□□□□ -2.01
ATG11YPR049C ATE1P16639 503 aa2.47□□□□□ -2.01
ATG11YPR049C HSP78P33416 811 aa2.47□□□□□ -2.01
ATG11YPR049C UBP5P39944 805 aa2.47□□□□□ -2.01
ATG11YPR049C TYW3P53177 273 aa2.47□□□□□ -2.01
ATG11YPR049C ORC1P54784 914 aaPredicted RBP2.47□□□□□ -2.01
ATG11YPR049C ORC4P54791 529 aa2.47□□□□□ -2.01
ATG11YPR049C STE4P18851 423 aa2.46□□□□□ -2.02
ATG11YPR049C THI4P32318 326 aa2.46□□□□□ -2.02
ATG11YPR049C SRP101P32916 621 aa2.46□□□□□ -2.02
ATG11YPR049C MRPL40P36534 297 aa2.46□□□□□ -2.02
ATG11YPR049C ECM21P38167 1117 aaKnown RBP2.46□□□□□ -2.02
ATG11YPR049C UBS1P38290 277 aa2.46□□□□□ -2.02
ATG11YPR049C GGA2P38817 585 aaKnown RBP2.46□□□□□ -2.02
ATG11YPR049C YIR016WP40572 265 aa2.46□□□□□ -2.02
ATG11YPR049C SUE1Q06524 206 aa2.46□□□□□ -2.02
ATG11YPR049C APC11Q12157 165 aa2.46□□□□□ -2.02
ATG11YPR049C YPR071WQ12346 211 aa2.46□□□□□ -2.02
ATG11YPR049C SPE1P08432 466 aa2.46□□□□□ -2.02
ATG11YPR049C HSP60P19882 572 aaKnown RBP2.46□□□□□ -2.02
ATG11YPR049C MRX3P38172 270 aa2.46□□□□□ -2.02
ATG11YPR049C CRG1P38892 291 aaRIP-Chip data2.46□□□□□ -2.02not detected
ATG11YPR049C YIL092WP40497 633 aa2.46□□□□□ -2.02
ATG11YPR049C IML2P47031 731 aa2.46□□□□□ -2.02
ATG11YPR049C LCB4Q12246 624 aa2.46□□□□□ -2.02
ATG11YPR049C GCR1P07261 785 aa2.46□□□□□ -2.02
ATG11YPR049C TRL1P09880 827 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms