RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C YEL075CP39972 122 aa8.45□□□□□ -1.06
LSP1YPL004C ATG3P40344 310 aa8.45□□□□□ -1.06
LSP1YPL004C PSP1P50896 841 aaKnown RBP8.45□□□□□ -1.06
LSP1YPL004C MAP1Q01662 387 aaKnown RBP RIP-Chip data8.45□□□□□ -1.06 RIP-Chip
LSP1YPL004C SYH1Q02875 849 aaKnown RBP8.45□□□□□ -1.06
LSP1YPL004C UTP5Q04177 643 aaKnown RBP8.45□□□□□ -1.06
LSP1YPL004C ERV41Q04651 352 aa8.45□□□□□ -1.06
LSP1YPL004C YDR222WQ04925 415 aa8.45□□□□□ -1.06
LSP1YPL004C TAF9Q05027 157 aa8.45□□□□□ -1.06
LSP1YPL004C ECM22Q05958 814 aaPredicted RBP8.45□□□□□ -1.06
LSP1YPL004C MTF1P14908 341 aaKnown RBP8.44□□□□□ -1.06
LSP1YPL004C AEP2P22136 580 aa8.44□□□□□ -1.06
LSP1YPL004C RAD16P31244 790 aa8.44□□□□□ -1.06
LSP1YPL004C SPC110P32380 944 aa8.44□□□□□ -1.06
LSP1YPL004C YBR225WP38321 900 aa8.44□□□□□ -1.06
LSP1YPL004C TDA3P38758 523 aa8.44□□□□□ -1.06
LSP1YPL004C CDC1P40986 491 aa8.44□□□□□ -1.06
LSP1YPL004C GUF1P46943 645 aa8.44□□□□□ -1.06
LSP1YPL004C YMR1P47147 688 aaKnown RBP RIP-Chip data8.44□□□□□ -1.06not detected
LSP1YPL004C SCY1P53009 804 aa8.44□□□□□ -1.06
LSP1YPL004C YGR021WP53212 290 aa8.44□□□□□ -1.06
LSP1YPL004C LEE1Q02799 301 aaKnown RBP8.44□□□□□ -1.06
LSP1YPL004C FMP25Q08023 583 aa8.44□□□□□ -1.06
LSP1YPL004C MDM38Q08179 573 aa8.44□□□□□ -1.06
LSP1YPL004C DDC1Q08949 612 aa8.44□□□□□ -1.06
LSP1YPL004C YPQ1Q12010 308 aa8.44□□□□□ -1.06
LSP1YPL004C APL4Q12028 832 aa8.44□□□□□ -1.06
LSP1YPL004C NDJ1Q12366 352 aa8.44□□□□□ -1.06
LSP1YPL004C KEX2P13134 814 aa8.43□□□□□ -1.06
LSP1YPL004C VMA4P22203 233 aaKnown RBP8.43□□□□□ -1.06
LSP1YPL004C PPZ1P26570 692 aa8.43□□□□□ -1.06
LSP1YPL004C YKL050CP35736 922 aa8.43□□□□□ -1.06
LSP1YPL004C YBR053CP38235 358 aa8.43□□□□□ -1.06
LSP1YPL004C SSP1P38871 571 aa8.43□□□□□ -1.06
LSP1YPL004C AVT2P39981 480 aa8.43□□□□□ -1.06
LSP1YPL004C SNZ3P43545 298 aa8.43□□□□□ -1.06
LSP1YPL004C YGR111WP53265 400 aa8.43□□□□□ -1.06
LSP1YPL004C UTP8P53276 713 aaKnown RBP8.43□□□□□ -1.06
LSP1YPL004C SNZ2P53824 298 aa8.43□□□□□ -1.06
LSP1YPL004C ALF1P53904 254 aa8.43□□□□□ -1.06
LSP1YPL004C CTR9P89105 1077 aa8.43□□□□□ -1.06
LSP1YPL004C VPS38Q05919 439 aa8.43□□□□□ -1.06
LSP1YPL004C BSP1Q06604 576 aa8.43□□□□□ -1.06
LSP1YPL004C DAS2Q12084 232 aa8.43□□□□□ -1.06
LSP1YPL004C PUT4P15380 627 aa8.42□□□□□ -1.06
LSP1YPL004C RGR1P19263 1082 aa8.42□□□□□ -1.06
LSP1YPL004C BET2P20133 325 aa8.42□□□□□ -1.06
LSP1YPL004C RRN6P32786 894 aa8.42□□□□□ -1.06
LSP1YPL004C GYP6P32806 458 aa8.42□□□□□ -1.06
LSP1YPL004C CBR1P38626 284 aaKnown RBP8.42□□□□□ -1.06
LSP1YPL004C RPT2P40327 437 aaKnown RBP8.42□□□□□ -1.06
LSP1YPL004C PRK1P40494 810 aa8.42□□□□□ -1.06
LSP1YPL004C RSM7P47150 247 aa8.42□□□□□ -1.06
LSP1YPL004C MTD1Q02046 320 aaKnown RBP8.42□□□□□ -1.06
LSP1YPL004C GCN5Q03330 439 aa8.42□□□□□ -1.06
LSP1YPL004C NSE5Q03718 556 aa8.42□□□□□ -1.06
LSP1YPL004C PML39Q03760 334 aa8.42□□□□□ -1.06
LSP1YPL004C SXM1Q04175 944 aaKnown RBP8.42□□□□□ -1.06
LSP1YPL004C HRD3Q05787 833 aa8.42□□□□□ -1.06
LSP1YPL004C YCG1Q06680 1035 aa8.42□□□□□ -1.06
LSP1YPL004C SAM3Q08986 587 aa8.42□□□□□ -1.06
LSP1YPL004C EMP46Q12396 444 aa8.42□□□□□ -1.06
LSP1YPL004C ADE3P07245 946 aaKnown RBP8.41□□□□□ -1.06
LSP1YPL004C MTF2P10849 440 aa8.41□□□□□ -1.06
LSP1YPL004C IMG2P25642 146 aaPredicted RBP8.41□□□□□ -1.06
LSP1YPL004C HXT1P32465 570 aa8.41□□□□□ -1.06
LSP1YPL004C SET5P38890 526 aaKnown RBP8.41□□□□□ -1.06
LSP1YPL004C YMR124WP39523 943 aaKnown RBP8.41□□□□□ -1.06
LSP1YPL004C NUP60P39705 539 aa8.41□□□□□ -1.06
LSP1YPL004C PSY2P40164 858 aa8.41□□□□□ -1.06
LSP1YPL004C STU2P46675 888 aa8.41□□□□□ -1.06
LSP1YPL004C SIL1Q08199 421 aa8.41□□□□□ -1.06
LSP1YPL004C CIR2Q08822 631 aa8.41□□□□□ -1.06
LSP1YPL004C LCB4Q12246 624 aa8.41□□□□□ -1.06
LSP1YPL004C BEM2P39960 2167 aaKnown RBP8.4□□□□□ -1.06
LSP1YPL004C CYC8P14922 966 aa8.4□□□□□ -1.06
LSP1YPL004C RAM1P22007 431 aa8.4□□□□□ -1.06
LSP1YPL004C DAL1P32375 460 aa8.4□□□□□ -1.06
LSP1YPL004C YKL097CP34245 136 aa8.4□□□□□ -1.06
LSP1YPL004C BLI1P35727 113 aa8.4□□□□□ -1.06
LSP1YPL004C PCH2P38126 564 aa8.4□□□□□ -1.06
LSP1YPL004C YMR018WQ04364 514 aa8.4□□□□□ -1.06
LSP1YPL004C AIM32Q04689 311 aa8.4□□□□□ -1.06
LSP1YPL004C AIM39Q08223 395 aa8.4□□□□□ -1.06
LSP1YPL004C YOR059CQ08448 450 aaKnown RBP8.4□□□□□ -1.06
LSP1YPL004C CCP1P00431 361 aa8.39□□□□□ -1.07
LSP1YPL004C GFA1P14742 717 aaKnown RBP8.39□□□□□ -1.07
LSP1YPL004C SEC23P15303 768 aaKnown RBP8.39□□□□□ -1.07
LSP1YPL004C STE11P23561 717 aa8.39□□□□□ -1.07
LSP1YPL004C PPH22P23595 377 aa8.39□□□□□ -1.07
LSP1YPL004C RRP43P25359 394 aaPredicted RBP8.39□□□□□ -1.07
LSP1YPL004C ABD1P32783 436 aaPredicted RBP8.39□□□□□ -1.07
LSP1YPL004C SRB2P34162 210 aa8.39□□□□□ -1.07
LSP1YPL004C DUG2P38149 878 aa8.39□□□□□ -1.07
LSP1YPL004C NCL1P38205 684 aaKnown RBP8.39□□□□□ -1.07
LSP1YPL004C ASG1P40467 964 aa8.39□□□□□ -1.07
LSP1YPL004C EFM4P40516 257 aa8.39□□□□□ -1.07
LSP1YPL004C TUB4P53378 473 aa8.39□□□□□ -1.07
LSP1YPL004C PMT7Q06644 662 aa8.39□□□□□ -1.07
LSP1YPL004C FAB1P34756 2278 aa8.39□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms