RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C MSS1P32559 526 aaPredicted RBP3.3□□□□□ -1.88
RPL40BYKR094C MAL11P53048 616 aa3.3□□□□□ -1.88
RPL40BYKR094C SNP1Q00916 300 aaPredicted RBP3.3□□□□□ -1.88
RPL40BYKR094C CDC9P04819 755 aa3.29□□□□□ -1.88
RPL40BYKR094C VBA3P25594 458 aa3.29□□□□□ -1.88
RPL40BYKR094C APN2P38207 520 aa3.29□□□□□ -1.88
RPL40BYKR094C HSL7P38274 827 aa3.29□□□□□ -1.88
RPL40BYKR094C SET2P46995 733 aaKnown RBP3.29□□□□□ -1.88
RPL40BYKR094C BRE5P53741 515 aaKnown RBP3.29□□□□□ -1.88
RPL40BYKR094C NGL2Q03264 515 aaKnown RBP3.29□□□□□ -1.88
RPL40BYKR094C UFO1Q04511 668 aa3.29□□□□□ -1.88
RPL40BYKR094C YEL1P34225 687 aa3.28□□□□□ -1.88
RPL40BYKR094C ELF1P36053 145 aa3.28□□□□□ -1.88
RPL40BYKR094C CAF16P43569 289 aa3.28□□□□□ -1.88
RPL40BYKR094C IRC8P47046 822 aa3.28□□□□□ -1.88
RPL40BYKR094C YJL049WP47048 450 aa3.28□□□□□ -1.88
RPL40BYKR094C YGL117WP53133 265 aa3.28□□□□□ -1.88
RPL40BYKR094C NHX1Q04121 633 aa3.28□□□□□ -1.88
RPL40BYKR094C ORM2Q06144 216 aa3.28□□□□□ -1.88
RPL40BYKR094C VPS36Q06696 566 aa3.28□□□□□ -1.88
RPL40BYKR094C LEU2P04173 364 aaPredicted RBP3.27□□□□□ -1.89
RPL40BYKR094C NTH1P32356 751 aa3.27□□□□□ -1.89
RPL40BYKR094C POM34Q12445 299 aa3.27□□□□□ -1.89
RPL40BYKR094C ERR1P0CX10 437 aa3.26□□□□□ -1.89
RPL40BYKR094C ERR2P0CX11 437 aa3.26□□□□□ -1.89
RPL40BYKR094C BEM3P32873 1128 aa3.26□□□□□ -1.89
RPL40BYKR094C COS111P38308 924 aa3.26□□□□□ -1.89
RPL40BYKR094C ATP23P53722 227 aa3.26□□□□□ -1.89
RPL40BYKR094C CPR8P53728 308 aa3.26□□□□□ -1.89
RPL40BYKR094C YFT2Q06676 274 aa3.26□□□□□ -1.89
RPL40BYKR094C ISA1Q07821 250 aaPredicted RBP3.26□□□□□ -1.89
RPL40BYKR094C HOG1P32485 435 aa3.25□□□□□ -1.89
RPL40BYKR094C TRS23Q03784 219 aa3.25□□□□□ -1.89
RPL40BYKR094C IRC3Q06683 689 aa3.25□□□□□ -1.89
RPL40BYKR094C IZH3Q07959 543 aa3.25□□□□□ -1.89
RPL40BYKR094C ERG20P08524 352 aaKnown RBP3.24□□□□□ -1.89
RPL40BYKR094C CIT2P08679 460 aa3.24□□□□□ -1.89
RPL40BYKR094C MNN4P36044 1178 aa3.24□□□□□ -1.89
RPL40BYKR094C AKL1P38080 1108 aaKnown RBP3.24□□□□□ -1.89
RPL40BYKR094C PRS5Q12265 496 aaKnown RBP3.24□□□□□ -1.89
RPL40BYKR094C MDM12Q92328 271 aa3.24□□□□□ -1.89
RPL40BYKR094C MEF1P25039 761 aa3.23□□□□□ -1.89
RPL40BYKR094C SSZ1P38788 538 aaKnown RBP3.23□□□□□ -1.89
RPL40BYKR094C CDC53Q12018 815 aaKnown RBP3.23□□□□□ -1.89
RPL40BYKR094C TUP1P16649 713 aa3.22□□□□□ -1.89
RPL40BYKR094C PMA2P19657 947 aa3.22□□□□□ -1.89
RPL40BYKR094C SEC15P22224 910 aa3.22□□□□□ -1.89
RPL40BYKR094C YPT7P32939 208 aa3.22□□□□□ -1.89
RPL40BYKR094C RIM4P38741 713 aa3.22□□□□□ -1.89
RPL40BYKR094C DSS1P39112 969 aa3.22□□□□□ -1.89
RPL40BYKR094C BIT61P47041 543 aa3.22□□□□□ -1.89
RPL40BYKR094C EUG1P32474 517 aa3.21□□□□□ -1.9
RPL40BYKR094C YHR202WP38887 602 aa3.21□□□□□ -1.9
RPL40BYKR094C NMD5P46970 1048 aa3.21□□□□□ -1.9
RPL40BYKR094C SCW4P53334 386 aaKnown RBP3.21□□□□□ -1.9
RPL40BYKR094C GIS2P53849 153 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
RPL40BYKR094C DAK1P54838 584 aaKnown RBP3.21□□□□□ -1.9
RPL40BYKR094C ERG13P54839 491 aaKnown RBP3.21□□□□□ -1.9
RPL40BYKR094C RPL7AP05737 244 aaKnown RBP3.2□□□□□ -1.9
RPL40BYKR094C RPS9BP05755 195 aaKnown RBP3.2□□□□□ -1.9
RPL40BYKR094C SRD1P09007 221 aa3.2□□□□□ -1.9
RPL40BYKR094C AQY1P0CD91 305 aa3.2□□□□□ -1.9
RPL40BYKR094C GSY1P23337 708 aa3.2□□□□□ -1.9
RPL40BYKR094C KIN82P25341 720 aa3.2□□□□□ -1.9
RPL40BYKR094C DOT6P40059 670 aaKnown RBP3.2□□□□□ -1.9
RPL40BYKR094C YJR039WP47107 1121 aa3.2□□□□□ -1.9
RPL40BYKR094C VHS3Q08438 674 aa3.2□□□□□ -1.9
RPL40BYKR094C RPL7BQ12213 244 aaKnown RBP3.2□□□□□ -1.9
RPL40BYKR094C HEM1P09950 548 aaPredicted RBP3.19□□□□□ -1.9
RPL40BYKR094C FRS1P15624 595 aaKnown RBP3.19□□□□□ -1.9
RPL40BYKR094C MRPL9P31334 269 aa3.19□□□□□ -1.9
RPL40BYKR094C NUG1P40010 520 aaKnown RBP3.19□□□□□ -1.9
RPL40BYKR094C AIM14P53109 570 aa3.19□□□□□ -1.9
RPL40BYKR094C RSC9Q03124 581 aa3.19□□□□□ -1.9
RPL40BYKR094C RCR2Q03446 210 aaKnown RBP3.19□□□□□ -1.9
RPL40BYKR094C NSE3Q05541 303 aa3.19□□□□□ -1.9
RPL40BYKR094C DCS2Q12123 353 aa3.19□□□□□ -1.9
RPL40BYKR094C ZPS1Q12512 249 aa3.19□□□□□ -1.9
RPL40BYKR094C HMG1P12683 1054 aa3.18□□□□□ -1.9
RPL40BYKR094C PET127P32606 800 aa3.18□□□□□ -1.9
RPL40BYKR094C PXL1P36166 706 aa3.18□□□□□ -1.9
RPL40BYKR094C MNT3P40549 630 aa3.18□□□□□ -1.9
RPL40BYKR094C SNO3P43544 222 aa3.18□□□□□ -1.9
RPL40BYKR094C YIP4P53093 235 aa3.18□□□□□ -1.9
RPL40BYKR094C SEC3P33332 1336 aaKnown RBP3.18□□□□□ -1.9
RPL40BYKR094C TSR4P25040 408 aa3.17□□□□□ -1.9
RPL40BYKR094C IMG2P25642 146 aaPredicted RBP3.17□□□□□ -1.9
RPL40BYKR094C ASK1P35734 292 aa3.17□□□□□ -1.9
RPL40BYKR094C CHZ1P40019 153 aaPredicted RBP3.17□□□□□ -1.9
RPL40BYKR094C PCI8P40512 444 aa3.17□□□□□ -1.9
RPL40BYKR094C MAF1P41910 395 aa3.17□□□□□ -1.9
RPL40BYKR094C YJL043WP47053 257 aa3.17□□□□□ -1.9
RPL40BYKR094C VBA4Q04602 768 aaKnown RBP3.17□□□□□ -1.9
RPL40BYKR094C ATG33Q06485 197 aa3.17□□□□□ -1.9
RPL40BYKR094C NEW1Q08972 1196 aaKnown RBP3.17□□□□□ -1.9
RPL40BYKR094C CPA2P03965 1118 aaKnown RBP3.16□□□□□ -1.9
RPL40BYKR094C STI1P15705 589 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
RPL40BYKR094C TIM23P32897 222 aa3.16□□□□□ -1.9
RPL40BYKR094C PIH1P38768 344 aa3.16□□□□□ -1.9
RPL40BYKR094C JHD1P40034 492 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms