RNA–Protein interactions for RNA: YKL124W

SSH4, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene SSH4, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSH4YKL124W MPH2P0CD99 609 aa4.74□□□□□ -1.65
SSH4YKL124W CDC42P19073 191 aa4.74□□□□□ -1.65
SSH4YKL124W SPO11P23179 398 aa4.74□□□□□ -1.65
SSH4YKL124W APL1P27351 700 aa4.74□□□□□ -1.65
SSH4YKL124W GAC1P28006 793 aa4.74□□□□□ -1.65
SSH4YKL124W PEX2P32800 271 aa4.74□□□□□ -1.65
SSH4YKL124W PCM1P38628 557 aaKnown RBP4.74□□□□□ -1.65
SSH4YKL124W ERP5P38819 212 aa4.74□□□□□ -1.65
SSH4YKL124W SAH1P39954 449 aaKnown RBP4.74□□□□□ -1.65
SSH4YKL124W RSM25P40496 264 aa4.74□□□□□ -1.65
SSH4YKL124W RPL34BP40525 121 aaKnown RBP4.74□□□□□ -1.65
SSH4YKL124W YGR237CP50089 785 aa4.74□□□□□ -1.65
SSH4YKL124W PSP1P50896 841 aaKnown RBP4.74□□□□□ -1.65
SSH4YKL124W ALT1P52893 592 aa4.74□□□□□ -1.65
SSH4YKL124W LSC2P53312 427 aa4.74□□□□□ -1.65
SSH4YKL124W RRP9Q06506 573 aaKnown RBP4.74□□□□□ -1.65
SSH4YKL124W YOR378WQ08902 515 aa4.74□□□□□ -1.65
SSH4YKL124W TFB4Q12004 338 aa4.74□□□□□ -1.65
SSH4YKL124W GAL10P04397 699 aa4.73□□□□□ -1.65
SSH4YKL124W PDE1P22434 369 aa4.73□□□□□ -1.65
SSH4YKL124W PUP3P25451 205 aaKnown RBP4.73□□□□□ -1.65
SSH4YKL124W PEX34P25584 144 aa4.73□□□□□ -1.65
SSH4YKL124W PSO2P30620 661 aa4.73□□□□□ -1.65
SSH4YKL124W ISF1P32488 338 aa4.73□□□□□ -1.65
SSH4YKL124W STE5P32917 917 aa4.73□□□□□ -1.65
SSH4YKL124W TKL2P33315 681 aa4.73□□□□□ -1.65
SSH4YKL124W TFC3P34111 1160 aa4.73□□□□□ -1.65
SSH4YKL124W AGP2P38090 596 aa4.73□□□□□ -1.65
SSH4YKL124W RAD55P38953 406 aa4.73□□□□□ -1.65
SSH4YKL124W DSE1P40077 573 aa4.73□□□□□ -1.65
SSH4YKL124W CPR7P47103 393 aa4.73□□□□□ -1.65
SSH4YKL124W TIM11P81449 96 aaPredicted RBP4.73□□□□□ -1.65
SSH4YKL124W TBF1Q02457 562 aa4.73□□□□□ -1.65
SSH4YKL124W GFD1Q04839 188 aaKnown RBP4.73□□□□□ -1.65
SSH4YKL124W YAP7Q08182 245 aa4.73□□□□□ -1.65
SSH4YKL124W ABP140Q08641 628 aaKnown RBP4.73□□□□□ -1.65
SSH4YKL124W AFT2Q08957 416 aa4.73□□□□□ -1.65
SSH4YKL124W GPM2Q12008 311 aa4.73□□□□□ -1.65
SSH4YKL124W YDL206WQ12424 762 aa4.73□□□□□ -1.65
SSH4YKL124W MTF1P14908 341 aaKnown RBP4.72□□□□□ -1.65
SSH4YKL124W RNR1P21524 888 aaKnown RBP4.72□□□□□ -1.65
SSH4YKL124W TSA1P34760 196 aaKnown RBP4.72□□□□□ -1.65
SSH4YKL124W YKR051WP36142 418 aa4.72□□□□□ -1.65
SSH4YKL124W ADE17P38009 592 aaKnown RBP4.72□□□□□ -1.65
SSH4YKL124W NPR3P38742 1146 aa4.72□□□□□ -1.65
SSH4YKL124W RRM3P38766 723 aa4.72□□□□□ -1.65
SSH4YKL124W SFB3P38810 929 aa4.72□□□□□ -1.65
SSH4YKL124W BTT1P40314 149 aaPredicted RBP4.72□□□□□ -1.65
SSH4YKL124W PEX8P53248 589 aa4.72□□□□□ -1.65
SSH4YKL124W KRE33P53914 1056 aaKnown RBP4.72□□□□□ -1.65
SSH4YKL124W STE20Q03497 939 aaKnown RBP4.72□□□□□ -1.65
SSH4YKL124W PPM1Q04081 328 aa4.72□□□□□ -1.65
SSH4YKL124W YLR297WQ05899 129 aa4.72□□□□□ -1.65
SSH4YKL124W YOL075CQ08234 1294 aa4.72□□□□□ -1.65
SSH4YKL124W SLX4Q12098 748 aa4.72□□□□□ -1.65
SSH4YKL124W APC11Q12157 165 aa4.72□□□□□ -1.65
SSH4YKL124W HRT3Q12347 344 aa4.72□□□□□ -1.65
SSH4YKL124W IME1P21190 360 aa4.72□□□□□ -1.65
SSH4YKL124W SAT4P25333 603 aaKnown RBP4.72□□□□□ -1.65
SSH4YKL124W RRT12P25381 491 aa4.72□□□□□ -1.65
SSH4YKL124W MRC1P25588 1096 aa4.72□□□□□ -1.65
SSH4YKL124W GSY2P27472 705 aa4.72□□□□□ -1.65
SSH4YKL124W KIP1P28742 1111 aa4.72□□□□□ -1.65
SSH4YKL124W RAD16P31244 790 aa4.72□□□□□ -1.65
SSH4YKL124W FRE1P32791 686 aa4.72□□□□□ -1.65
SSH4YKL124W COY1P34237 679 aa4.72□□□□□ -1.65
SSH4YKL124W YMC2P38087 329 aa4.72□□□□□ -1.65
SSH4YKL124W YHR218WP38899 603 aa4.72□□□□□ -1.65
SSH4YKL124W RVS167P39743 482 aaKnown RBP4.72□□□□□ -1.65
SSH4YKL124W IES5P40060 125 aa4.72□□□□□ -1.65
SSH4YKL124W SHQ1P40486 507 aaPredicted RBP4.72□□□□□ -1.65
SSH4YKL124W SDS3P40505 327 aa4.72□□□□□ -1.65
SSH4YKL124W YGR021WP53212 290 aa4.72□□□□□ -1.65
SSH4YKL124W TUB4P53378 473 aa4.72□□□□□ -1.65
SSH4YKL124W MZM1Q03429 123 aaPredicted RBP4.72□□□□□ -1.65
SSH4YKL124W EBS1Q03466 884 aaKnown RBP4.72□□□□□ -1.65
SSH4YKL124W WAR1Q03631 944 aa4.72□□□□□ -1.65
SSH4YKL124W ATG16Q03818 150 aa4.72□□□□□ -1.65
SSH4YKL124W VMS1Q04311 632 aaKnown RBP4.72□□□□□ -1.65
SSH4YKL124W PRM6Q04705 352 aa4.72□□□□□ -1.65
SSH4YKL124W CSR1Q06705 408 aaKnown RBP4.72□□□□□ -1.65
SSH4YKL124W DBP10Q12389 995 aaKnown RBP4.72□□□□□ -1.65
SSH4YKL124W CCH1P50077 2039 aa4.71□□□□□ -1.65
SSH4YKL124W HIS5P07172 385 aa4.71□□□□□ -1.66
SSH4YKL124W DPB3P27344 201 aa4.71□□□□□ -1.66
SSH4YKL124W NUD1P32336 851 aa4.71□□□□□ -1.66
SSH4YKL124W EFB1P32471 206 aaKnown RBP4.71□□□□□ -1.66
SSH4YKL124W YKL097CP34245 136 aa4.71□□□□□ -1.66
SSH4YKL124W NOP4P37838 685 aaKnown RBP4.71□□□□□ -1.66
SSH4YKL124W DUG2P38149 878 aa4.71□□□□□ -1.66
SSH4YKL124W ARP1P38696 384 aa4.71□□□□□ -1.66
SSH4YKL124W GEM1P39722 662 aa4.71□□□□□ -1.66
SSH4YKL124W YNL011CP53980 444 aa4.71□□□□□ -1.66
SSH4YKL124W CEG1Q01159 459 aaPredicted RBP4.71□□□□□ -1.66
SSH4YKL124W HER2Q03557 464 aa4.71□□□□□ -1.66
SSH4YKL124W VTI1Q04338 217 aa4.71□□□□□ -1.66
SSH4YKL124W RSC2Q06488 889 aa4.71□□□□□ -1.66
SSH4YKL124W GRC3Q07845 632 aa4.71□□□□□ -1.66
SSH4YKL124W FMP25Q08023 583 aa4.71□□□□□ -1.66
SSH4YKL124W APC5Q08683 685 aa4.71□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms