RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFA1	YKL028W	YCG1	Q06680	1035 aa		4.84	□□□□□ -1.63
TFA1	YKL028W	PGC1	Q08959	321 aa		4.84	□□□□□ -1.63
TFA1	YKL028W	PSF3	Q12146	194 aa		4.84	□□□□□ -1.63
TFA1	YKL028W	YLL058W	Q12198	575 aa		4.84	□□□□□ -1.63
TFA1	YKL028W	UBC1	P21734	215 aa	Known RBP	4.83	□□□□□ -1.64
TFA1	YKL028W	KIP1	P28742	1111 aa		4.83	□□□□□ -1.64
TFA1	YKL028W	CYS3	P31373	394 aa	Known RBP	4.83	□□□□□ -1.64
TFA1	YKL028W	NNK1	P36003	928 aa		4.83	□□□□□ -1.64
TFA1	YKL028W	YHR202W	P38887	602 aa		4.83	□□□□□ -1.64
TFA1	YKL028W	DUN1	P39009	513 aa		4.83	□□□□□ -1.64
TFA1	YKL028W	CCT3	P39077	534 aa	Known RBP	4.83	□□□□□ -1.64
TFA1	YKL028W	STL1	P39932	569 aa		4.83	□□□□□ -1.64
TFA1	YKL028W	EAF5	P39995	279 aa		4.83	□□□□□ -1.64
TFA1	YKL028W	PUG1	P40100	303 aa		4.83	□□□□□ -1.64
TFA1	YKL028W	SET2	P46995	733 aa	Known RBP	4.83	□□□□□ -1.64
TFA1	YKL028W	CPR6	P53691	371 aa	Known RBP	4.83	□□□□□ -1.64
TFA1	YKL028W	NOG2	P53742	486 aa	Known RBP	4.83	□□□□□ -1.64
TFA1	YKL028W	CBK1	P53894	756 aa		4.83	□□□□□ -1.64
TFA1	YKL028W	TFC6	Q06339	672 aa		4.83	□□□□□ -1.64
TFA1	YKL028W	YPL191C	Q08930	360 aa		4.83	□□□□□ -1.64
TFA1	YKL028W	CWC2	Q12046	339 aa	Predicted RBP	4.83	□□□□□ -1.64
TFA1	YKL028W	DCS2	Q12123	353 aa		4.83	□□□□□ -1.64
TFA1	YKL028W	RVB2	Q12464	471 aa	Known RBP	4.83	□□□□□ -1.64
TFA1	YKL028W	YBR182C-A	Q8TGU6	64 aa		4.83	□□□□□ -1.64
TFA1	YKL028W	SWI6	P09959	803 aa		4.82	□□□□□ -1.64
TFA1	YKL028W	PDX1	P16451	410 aa		4.82	□□□□□ -1.64
TFA1	YKL028W	ACE2	P21192	770 aa		4.82	□□□□□ -1.64
TFA1	YKL028W	TGL1	P34163	548 aa		4.82	□□□□□ -1.64
TFA1	YKL028W	YKR051W	P36142	418 aa		4.82	□□□□□ -1.64
TFA1	YKL028W	ETP1	P38748	585 aa	Known RBP	4.82	□□□□□ -1.64
TFA1	YKL028W	YER010C	P40011	234 aa		4.82	□□□□□ -1.64
TFA1	YKL028W	YER158C	P40095	573 aa		4.82	□□□□□ -1.64
TFA1	YKL028W	SAP4	P53036	818 aa		4.82	□□□□□ -1.64
TFA1	YKL028W	PKH1	Q03407	766 aa		4.82	□□□□□ -1.64
TFA1	YKL028W	PUS7	Q08647	676 aa	Known RBP	4.82	□□□□□ -1.64
TFA1	YKL028W	DIF1	O13577	133 aa		4.81	□□□□□ -1.64
TFA1	YKL028W	FUM1	P08417	488 aa	Known RBP	4.81	□□□□□ -1.64
TFA1	YKL028W	ADH4	P10127	382 aa		4.81	□□□□□ -1.64
TFA1	YKL028W	RED1	P14291	827 aa		4.81	□□□□□ -1.64
TFA1	YKL028W	YCL002C	P25565	263 aa		4.81	□□□□□ -1.64
TFA1	YKL028W	DBF4	P32325	704 aa		4.81	□□□□□ -1.64
TFA1	YKL028W	MDL2	P33311	773 aa		4.81	□□□□□ -1.64
TFA1	YKL028W	BYE1	P36106	594 aa		4.81	□□□□□ -1.64
TFA1	YKL028W	UGA2	P38067	497 aa		4.81	□□□□□ -1.64
TFA1	YKL028W	SRP68	P38687	599 aa	Known RBP	4.81	□□□□□ -1.64
TFA1	YKL028W	SWD1	P39706	426 aa		4.81	□□□□□ -1.64
TFA1	YKL028W	NPP2	P39997	493 aa		4.81	□□□□□ -1.64
TFA1	YKL028W	RPN3	P40016	523 aa	Known RBP	4.81	□□□□□ -1.64
TFA1	YKL028W	SCS2	P40075	244 aa	Known RBP	4.81	□□□□□ -1.64
TFA1	YKL028W	LSM5	P40089	93 aa	Known RBP	4.81	□□□□□ -1.64
TFA1	YKL028W	IRC5	P43610	853 aa		4.81	□□□□□ -1.64
TFA1	YKL028W	RMD8	P43620	662 aa		4.81	□□□□□ -1.64
TFA1	YKL028W	BFA1	P47113	574 aa		4.81	□□□□□ -1.64
TFA1	YKL028W	CTF18	P49956	741 aa		4.81	□□□□□ -1.64
TFA1	YKL028W	HOS3	Q02959	697 aa	Known RBP	4.81	□□□□□ -1.64
TFA1	YKL028W	GIS1	Q03833	894 aa		4.81	□□□□□ -1.64
TFA1	YKL028W	LRS4	Q04087	347 aa	Known RBP	4.81	□□□□□ -1.64
TFA1	YKL028W	RSA3	Q05942	220 aa	Known RBP	4.81	□□□□□ -1.64
TFA1	YKL028W	RPN7	Q06103	429 aa	Known RBP	4.81	□□□□□ -1.64
TFA1	YKL028W	RRP9	Q06506	573 aa	Known RBP	4.81	□□□□□ -1.64
TFA1	YKL028W	MDM38	Q08179	573 aa		4.81	□□□□□ -1.64
TFA1	YKL028W	AVO1	Q08236	1176 aa		4.81	□□□□□ -1.64
TFA1	YKL028W	TRM8	Q12009	286 aa		4.81	□□□□□ -1.64
TFA1	YKL028W	HSP42	Q12329	375 aa		4.81	□□□□□ -1.64
TFA1	YKL028W	PGA3	Q12746	312 aa	Known RBP	4.81	□□□□□ -1.64
TFA1	YKL028W	CKA1	P15790	372 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	MCM3	P24279	971 aa	Known RBP	4.8	□□□□□ -1.64
TFA1	YKL028W	DPH2	P32461	534 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	HXT4	P32467	576 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	CBF2	P32504	956 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	YKR018C	P36114	725 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	YBR225W	P38321	900 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	YIL166C	P40445	542 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	CIR1	P42940	261 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	RRT6	P53117	311 aa	Predicted RBP	4.8	□□□□□ -1.64
TFA1	YKL028W	YGR250C	P53316	781 aa	Known RBP	4.8	□□□□□ -1.64
TFA1	YKL028W	MTD1	Q02046	320 aa	Known RBP	4.8	□□□□□ -1.64
TFA1	YKL028W	TPP1	Q03796	238 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	VTI1	Q04338	217 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	MFB1	Q04922	465 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	ISA1	Q07821	250 aa	Predicted RBP	4.8	□□□□□ -1.64
TFA1	YKL028W	NGL1	Q08213	363 aa	Known RBP	4.8	□□□□□ -1.64
TFA1	YKL028W	SFI1	Q12369	946 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	PHO5	P00635	467 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	ORC2	P32833	620 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	MTH1	P35198	433 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	GIC1	P38785	314 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	GPB2	P39717	880 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	PSF2	P40359	213 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	VID28	P40547	921 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	IMA5	P40884	581 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	ARE2	P53629	642 aa	Known RBP	4.8	□□□□□ -1.64
TFA1	YKL028W	FCP1	Q03254	732 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	CSR1	Q06705	408 aa	Known RBP	4.8	□□□□□ -1.64
TFA1	YKL028W	ADY3	Q07732	790 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	MCH5	Q08777	521 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	YPL277C	Q08989	487 aa		4.8	□□□□□ -1.64
TFA1	YKL028W	SOD2	P00447	233 aa		4.79	□□□□□ -1.64
TFA1	YKL028W	SES1	P07284	462 aa	Known RBP	4.79	□□□□□ -1.64
TFA1	YKL028W	VAS1	P07806	1104 aa	Known RBP	4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms