RNA–Protein interactions for RNA: YJL140W

RPB4, Transcript of RNA polymerase II subunit B32, yeastyeast

Gene RPB4, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB4YJL140W YPL066WQ12194 479 aa5.77□□□□□ -1.49
RPB4YJL140W CLF1Q12309 687 aaPredicted RBP5.77□□□□□ -1.49
RPB4YJL140W UBR2Q07963 1872 aa5.77□□□□□ -1.49
RPB4YJL140W RPP2AP05319 106 aaKnown RBP5.76□□□□□ -1.49
RPB4YJL140W NUC1P08466 329 aa5.76□□□□□ -1.49
RPB4YJL140W MATALPHA2P0CY08 210 aa5.76□□□□□ -1.49
RPB4YJL140W HMLALPHA2P0CY09 210 aa5.76□□□□□ -1.49
RPB4YJL140W CDC20P26309 610 aa5.76□□□□□ -1.49
RPB4YJL140W ANP1P32629 500 aa5.76□□□□□ -1.49
RPB4YJL140W MYO3P36006 1272 aa5.76□□□□□ -1.49
RPB4YJL140W MPT5P39016 859 aaKnown RBP RIP-Chip data5.76□□□□□ -1.49not detected
RPB4YJL140W AZR1P50080 613 aa5.76□□□□□ -1.49
RPB4YJL140W GDE1Q02979 1223 aa5.76□□□□□ -1.49
RPB4YJL140W SUE1Q06524 206 aa5.76□□□□□ -1.49
RPB4YJL140W PEX19Q07418 342 aa5.76□□□□□ -1.49
RPB4YJL140W SSF2Q12153 453 aaPredicted RBP5.76□□□□□ -1.49
RPB4YJL140W TY1B-AO13527 1196 aaKnown RBP5.75□□□□□ -1.49
RPB4YJL140W SIP5P40210 489 aaKnown RBP5.75□□□□□ -1.49
RPB4YJL140W FAA4P47912 694 aaKnown RBP5.75□□□□□ -1.49
RPB4YJL140W YKE2P52553 114 aa5.75□□□□□ -1.49
RPB4YJL140W LIF1P53150 421 aa5.75□□□□□ -1.49
RPB4YJL140W RPT6Q01939 405 aaKnown RBP5.75□□□□□ -1.49
RPB4YJL140W VPS16Q03308 798 aa5.75□□□□□ -1.49
RPB4YJL140W GSF2Q04697 403 aaKnown RBP5.75□□□□□ -1.49
RPB4YJL140W SWI6P09959 803 aa5.74□□□□□ -1.49
RPB4YJL140W FRS2P15625 503 aaKnown RBP5.74□□□□□ -1.49
RPB4YJL140W STE11P23561 717 aa5.74□□□□□ -1.49
RPB4YJL140W CAD1P24813 409 aaKnown RBP5.74□□□□□ -1.49
RPB4YJL140W AGP1P25376 633 aa5.74□□□□□ -1.49
RPB4YJL140W SBA1P28707 216 aaKnown RBP5.74□□□□□ -1.49
RPB4YJL140W DID4P36108 232 aa5.74□□□□□ -1.49
RPB4YJL140W SHM2P37291 469 aaKnown RBP5.74□□□□□ -1.49
RPB4YJL140W NDT80P38830 627 aa5.74□□□□□ -1.49
RPB4YJL140W CRG1P38892 291 aaRIP-Chip data5.74□□□□□ -1.49not detected
RPB4YJL140W FMS1P50264 508 aa5.74□□□□□ -1.49
RPB4YJL140W HFM1P51979 1187 aa5.74□□□□□ -1.49
RPB4YJL140W PEX14P53112 341 aa5.74□□□□□ -1.49
RPB4YJL140W CWC24P53769 259 aa5.74□□□□□ -1.49
RPB4YJL140W SPN1Q06505 410 aaPredicted RBP5.74□□□□□ -1.49
RPB4YJL140W OSW2Q12202 724 aa5.74□□□□□ -1.49
RPB4YJL140W ATG11Q12527 1178 aa5.74□□□□□ -1.49
RPB4YJL140W PHR1P05066 565 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
RPB4YJL140W CDC6P09119 513 aa5.73□□□□□ -1.49
RPB4YJL140W RDS1P25611 832 aa5.73□□□□□ -1.49
RPB4YJL140W CTS1P29029 562 aa5.73□□□□□ -1.49
RPB4YJL140W YHL017WP38745 532 aa5.73□□□□□ -1.49
RPB4YJL140W ALD5P40047 520 aaKnown RBP5.73□□□□□ -1.49
RPB4YJL140W CSM2P40465 213 aa5.73□□□□□ -1.49
RPB4YJL140W HYR1P40581 163 aaKnown RBP5.73□□□□□ -1.49
RPB4YJL140W BUD6P41697 788 aa5.73□□□□□ -1.49
RPB4YJL140W RPS7BP48164 190 aaKnown RBP5.73□□□□□ -1.49
RPB4YJL140W HUL5P53119 910 aa5.73□□□□□ -1.49
RPB4YJL140W COG8Q04632 607 aa5.73□□□□□ -1.49
RPB4YJL140W YLR407WQ06070 228 aa5.73□□□□□ -1.49
RPB4YJL140W TFC6Q06339 672 aa5.73□□□□□ -1.49
RPB4YJL140W NOP12Q08208 459 aaKnown RBP5.73□□□□□ -1.49
RPB4YJL140W DAP1Q12091 152 aa5.73□□□□□ -1.49
RPB4YJL140W YPL150WQ12152 901 aa5.73□□□□□ -1.49
RPB4YJL140W HCA4P20448 770 aaKnown RBP5.72□□□□□ -1.49
RPB4YJL140W PWP2P25635 923 aaKnown RBP5.72□□□□□ -1.49
RPB4YJL140W RPN12P32496 274 aa5.72□□□□□ -1.49
RPB4YJL140W POA1P38218 177 aa5.72□□□□□ -1.49
RPB4YJL140W RKM3P38222 552 aa5.72□□□□□ -1.49
RPB4YJL140W TPM2P40414 161 aa5.72□□□□□ -1.49
RPB4YJL140W PTA1Q01329 785 aaPredicted RBP5.72□□□□□ -1.49
RPB4YJL140W SRP1Q02821 542 aaKnown RBP5.72□□□□□ -1.49
RPB4YJL140W PSK2Q08217 1101 aa5.72□□□□□ -1.49
RPB4YJL140W FAL1Q12099 399 aaKnown RBP5.72□□□□□ -1.49
RPB4YJL140W RPL8AP17076 256 aaKnown RBP5.71□□□□□ -1.5
RPB4YJL140W MAK31P23059 88 aa5.71□□□□□ -1.5
RPB4YJL140W MAL33P38157 468 aa5.71□□□□□ -1.5
RPB4YJL140W YAP1801P38856 637 aa5.71□□□□□ -1.5
RPB4YJL140W RPN10P38886 268 aaKnown RBP5.71□□□□□ -1.5
RPB4YJL140W TVP23P38962 199 aa5.71□□□□□ -1.5
RPB4YJL140W ZRG8P40021 1076 aa5.71□□□□□ -1.5
RPB4YJL140W MND2P40577 368 aa5.71□□□□□ -1.5
RPB4YJL140W ALG2P43636 503 aa5.71□□□□□ -1.5
RPB4YJL140W CTR1P49573 406 aa5.71□□□□□ -1.5
RPB4YJL140W MNN10P50108 393 aaKnown RBP5.71□□□□□ -1.5
RPB4YJL140W RSC1P53236 928 aa5.71□□□□□ -1.5
RPB4YJL140W GTF1P53260 183 aaPredicted RBP5.71□□□□□ -1.5
RPB4YJL140W EMI2Q04409 500 aaKnown RBP5.71□□□□□ -1.5
RPB4YJL140W MYO5Q04439 1219 aaKnown RBP5.71□□□□□ -1.5
RPB4YJL140W JIP5Q06214 492 aaPredicted RBP5.71□□□□□ -1.5
RPB4YJL140W VIP1Q06685 1146 aaKnown RBP5.71□□□□□ -1.5
RPB4YJL140W MDM38Q08179 573 aa5.71□□□□□ -1.5
RPB4YJL140W HMI1Q12039 706 aa5.71□□□□□ -1.5
RPB4YJL140W AIM44Q99299 758 aa5.71□□□□□ -1.5
RPB4YJL140W MYO1P08964 1928 aa5.71□□□□□ -1.5
RPB4YJL140W HSP82P02829 709 aaKnown RBP5.7□□□□□ -1.5
RPB4YJL140W SES1P07284 462 aaKnown RBP5.7□□□□□ -1.5
RPB4YJL140W SRP54P20424 541 aaKnown RBP5.7□□□□□ -1.5
RPB4YJL140W FUB1P25659 250 aa5.7□□□□□ -1.5
RPB4YJL140W FUN30P31380 1131 aa5.7□□□□□ -1.5
RPB4YJL140W ABD1P32783 436 aaPredicted RBP5.7□□□□□ -1.5
RPB4YJL140W CCT5P40413 562 aaKnown RBP5.7□□□□□ -1.5
RPB4YJL140W SSL2Q00578 843 aa5.7□□□□□ -1.5
RPB4YJL140W MDM1Q01846 1127 aa5.7□□□□□ -1.5
RPB4YJL140W SKY1Q03656 742 aa5.7□□□□□ -1.5
RPB4YJL140W SHE9Q04172 456 aa5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms