RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W RAD57P25301 460 aa7.15□□□□□ -1.27
NUP49YGL172W RAD27P26793 382 aa7.15□□□□□ -1.27
NUP49YGL172W YMC2P38087 329 aa7.15□□□□□ -1.27
NUP49YGL172W SET5P38890 526 aaKnown RBP7.15□□□□□ -1.27
NUP49YGL172W CCC2P38995 1004 aa7.15□□□□□ -1.27
NUP49YGL172W RPT2P40327 437 aaKnown RBP7.15□□□□□ -1.27
NUP49YGL172W SEC9P40357 651 aa7.15□□□□□ -1.27
NUP49YGL172W MAF1P41910 395 aa7.15□□□□□ -1.27
NUP49YGL172W YNL034WP53963 612 aa7.15□□□□□ -1.27
NUP49YGL172W YNL018CP53976 612 aa7.15□□□□□ -1.27
NUP49YGL172W YNL011CP53980 444 aa7.15□□□□□ -1.27
NUP49YGL172W ADA2Q02336 434 aa7.15□□□□□ -1.27
NUP49YGL172W PRM6Q04705 352 aa7.15□□□□□ -1.27
NUP49YGL172W SOV1Q04748 898 aa7.15□□□□□ -1.27
NUP49YGL172W LEA1Q08963 238 aaPredicted RBP7.15□□□□□ -1.27
NUP49YGL172W GPM2Q12008 311 aa7.15□□□□□ -1.27
NUP49YGL172W MNL2Q12205 849 aa7.15□□□□□ -1.27
NUP49YGL172W HRT3Q12347 344 aa7.15□□□□□ -1.27
NUP49YGL172W APM4Q99186 491 aa7.15□□□□□ -1.27
NUP49YGL172W SEC23P15303 768 aaKnown RBP7.14□□□□□ -1.27
NUP49YGL172W PGS1P25578 521 aa7.14□□□□□ -1.27
NUP49YGL172W TKL2P33315 681 aa7.14□□□□□ -1.27
NUP49YGL172W STO1P34160 861 aaKnown RBP7.14□□□□□ -1.27
NUP49YGL172W YBR056WP38081 501 aa7.14□□□□□ -1.27
NUP49YGL172W RGD1P38339 666 aa7.14□□□□□ -1.27
NUP49YGL172W STB5P38699 743 aa7.14□□□□□ -1.27
NUP49YGL172W QNS1P38795 714 aaKnown RBP7.14□□□□□ -1.27
NUP49YGL172W TAF1P46677 1066 aa7.14□□□□□ -1.27
NUP49YGL172W RIM21P48565 533 aa7.14□□□□□ -1.27
NUP49YGL172W HOP2P53187 214 aa7.14□□□□□ -1.27
NUP49YGL172W YGR021WP53212 290 aa7.14□□□□□ -1.27
NUP49YGL172W YGR111WP53265 400 aa7.14□□□□□ -1.27
NUP49YGL172W ARO80Q04052 950 aa7.14□□□□□ -1.27
NUP49YGL172W YDR222WQ04925 415 aa7.14□□□□□ -1.27
NUP49YGL172W YPR109WQ06104 294 aa7.14□□□□□ -1.27
NUP49YGL172W YOR059CQ08448 450 aaKnown RBP7.14□□□□□ -1.27
NUP49YGL172W VPS54Q12071 889 aa7.14□□□□□ -1.27
NUP49YGL172W KAR3P17119 729 aa7.13□□□□□ -1.27
NUP49YGL172W PEX1P24004 1043 aa7.13□□□□□ -1.27
NUP49YGL172W NCL1P38205 684 aaKnown RBP7.13□□□□□ -1.27
NUP49YGL172W SIF2P38262 535 aa7.13□□□□□ -1.27
NUP49YGL172W TDA3P38758 523 aa7.13□□□□□ -1.27
NUP49YGL172W CAJ1P39101 391 aa7.13□□□□□ -1.27
NUP49YGL172W PSY2P40164 858 aa7.13□□□□□ -1.27
NUP49YGL172W EFM4P40516 257 aa7.13□□□□□ -1.27
NUP49YGL172W PFD1P46988 109 aa7.13□□□□□ -1.27
NUP49YGL172W JSN1P47135 1091 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27not detected
NUP49YGL172W APT1P49435 187 aaKnown RBP7.13□□□□□ -1.27
NUP49YGL172W PUS2P53167 370 aa7.13□□□□□ -1.27
NUP49YGL172W YNL035CP53962 389 aaKnown RBP7.13□□□□□ -1.27
NUP49YGL172W SYH1Q02875 849 aaKnown RBP7.13□□□□□ -1.27
NUP49YGL172W GYL1Q04322 720 aa7.13□□□□□ -1.27
NUP49YGL172W YMR018WQ04364 514 aa7.13□□□□□ -1.27
NUP49YGL172W MDM38Q08179 573 aa7.13□□□□□ -1.27
NUP49YGL172W SIL1Q08199 421 aa7.13□□□□□ -1.27
NUP49YGL172W DAS2Q12084 232 aa7.13□□□□□ -1.27
NUP49YGL172W EMP46Q12396 444 aa7.13□□□□□ -1.27
NUP49YGL172W BI2P03873 423 aa7.12□□□□□ -1.27
NUP49YGL172W BI4P03879 638 aa7.12□□□□□ -1.27
NUP49YGL172W ERG11P10614 530 aa7.12□□□□□ -1.27
NUP49YGL172W PET123P17558 318 aa7.12□□□□□ -1.27
NUP49YGL172W PDE1P22434 369 aa7.12□□□□□ -1.27
NUP49YGL172W SYN8P31377 255 aa7.12□□□□□ -1.27
NUP49YGL172W PEP7P32609 515 aa7.12□□□□□ -1.27
NUP49YGL172W MRP4P32902 394 aa7.12□□□□□ -1.27
NUP49YGL172W MCX1P38323 520 aaPredicted RBP7.12□□□□□ -1.27
NUP49YGL172W TCD1P38756 429 aa7.12□□□□□ -1.27
NUP49YGL172W STU2P46675 888 aa7.12□□□□□ -1.27
NUP49YGL172W JJJ1P53863 590 aa7.12□□□□□ -1.27
NUP49YGL172W SLG1P54867 378 aa7.12□□□□□ -1.27
NUP49YGL172W DIS3Q08162 1001 aaKnown RBP7.12□□□□□ -1.27
NUP49YGL172W DDC1Q08949 612 aa7.12□□□□□ -1.27
NUP49YGL172W YDR034W-BQ6Q5X2 51 aa7.12□□□□□ -1.27
NUP49YGL172W BI3Q9ZZW7 517 aa7.12□□□□□ -1.27
NUP49YGL172W SPE1P08432 466 aa7.11□□□□□ -1.27
NUP49YGL172W HXT1P32465 570 aa7.11□□□□□ -1.27
NUP49YGL172W BLI1P35727 113 aa7.11□□□□□ -1.27
NUP49YGL172W ABZ1P37254 787 aaPredicted RBP7.11□□□□□ -1.27
NUP49YGL172W TFG1P41895 735 aaPredicted RBP7.11□□□□□ -1.27
NUP49YGL172W VPS25P47142 202 aa7.11□□□□□ -1.27
NUP49YGL172W PIG1Q06216 648 aa7.11□□□□□ -1.27
NUP49YGL172W RCL1Q08096 367 aaPredicted RBP7.11□□□□□ -1.27
NUP49YGL172W NBP2Q12163 236 aa7.11□□□□□ -1.27
NUP49YGL172W YBL113CQ7M4S9 792 aa7.11□□□□□ -1.27
NUP49YGL172W HTA1P04911 132 aaKnown RBP7.1□□□□□ -1.27
NUP49YGL172W HTA2P04912 132 aa7.1□□□□□ -1.27
NUP49YGL172W MET4P32389 672 aa7.1□□□□□ -1.27
NUP49YGL172W SRB4P32569 687 aa7.1□□□□□ -1.27
NUP49YGL172W PEP12P32854 288 aa7.1□□□□□ -1.27
NUP49YGL172W HIS2P38635 335 aa7.1□□□□□ -1.27
NUP49YGL172W RAD55P38953 406 aa7.1□□□□□ -1.27
NUP49YGL172W SNZ3P43545 298 aa7.1□□□□□ -1.27
NUP49YGL172W GUF1P46943 645 aa7.1□□□□□ -1.27
NUP49YGL172W VTC4P47075 721 aa7.1□□□□□ -1.27
NUP49YGL172W KAP114P53067 1004 aa7.1□□□□□ -1.27
NUP49YGL172W SNZ2P53824 298 aa7.1□□□□□ -1.27
NUP49YGL172W DIG1Q03063 452 aaKnown RBP7.1□□□□□ -1.27
NUP49YGL172W TAF9Q05027 157 aa7.1□□□□□ -1.27
NUP49YGL172W YPR117WQ06116 2489 aa7.1□□□□□ -1.27
NUP49YGL172W CKI1P20485 582 aa7.1□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms