RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W PHO23P50947 330 aa8.05□□□□□ -1.12
LCP5YER127W TSC11P40061 1430 aa8.04□□□□□ -1.12
LCP5YER127W CAF20P12962 161 aaKnown RBP8.04□□□□□ -1.12
LCP5YER127W SHM2P37291 469 aaKnown RBP8.04□□□□□ -1.12
LCP5YER127W DUN1P39009 513 aa8.04□□□□□ -1.12
LCP5YER127W AMA1P50082 593 aa8.04□□□□□ -1.12
LCP5YER127W CTK1Q03957 528 aaKnown RBP8.04□□□□□ -1.12
LCP5YER127W SLX4Q12098 748 aa8.04□□□□□ -1.12
LCP5YER127W MPD2Q99316 277 aa8.04□□□□□ -1.12
LCP5YER127W VPS15P22219 1454 aa8.04□□□□□ -1.12
LCP5YER127W RPS17AP02407 136 aaKnown RBP8.03□□□□□ -1.12
LCP5YER127W PMA1P05030 918 aaKnown RBP8.03□□□□□ -1.12
LCP5YER127W RPS17BP14127 136 aaKnown RBP8.03□□□□□ -1.12
LCP5YER127W RNR1P21524 888 aaKnown RBP8.03□□□□□ -1.12
LCP5YER127W ERG6P25087 383 aaKnown RBP8.03□□□□□ -1.12
LCP5YER127W HCM1P25364 564 aa8.03□□□□□ -1.12
LCP5YER127W HEM12P32347 362 aaPredicted RBP8.03□□□□□ -1.12
LCP5YER127W EMP65P40085 556 aa8.03□□□□□ -1.12
LCP5YER127W VID28P40547 921 aa8.03□□□□□ -1.12
LCP5YER127W RTS3P53289 263 aa8.03□□□□□ -1.12
LCP5YER127W AIM39Q08223 395 aa8.03□□□□□ -1.12
LCP5YER127W YIR042CP40586 236 aa8.02□□□□□ -1.13
LCP5YER127W DAS1P47005 663 aa8.02□□□□□ -1.13
LCP5YER127W YNL034WP53963 612 aa8.02□□□□□ -1.13
LCP5YER127W YNL018CP53976 612 aa8.02□□□□□ -1.13
LCP5YER127W PHM6Q05637 104 aa8.02□□□□□ -1.13
LCP5YER127W YPS7Q06325 596 aa8.02□□□□□ -1.13
LCP5YER127W NOP56Q12460 504 aaKnown RBP RIP-Chip data8.02□□□□□ -1.13not detected
LCP5YER127W FRS1P15624 595 aaKnown RBP8.01□□□□□ -1.13
LCP5YER127W CTS1P29029 562 aa8.01□□□□□ -1.13
LCP5YER127W ELO3P40319 345 aa8.01□□□□□ -1.13
LCP5YER127W MTL1P53214 551 aa8.01□□□□□ -1.13
LCP5YER127W TGL2P54857 326 aa8.01□□□□□ -1.13
LCP5YER127W LAT1P12695 482 aaKnown RBP8□□□□□ -1.13
LCP5YER127W ATP12P22135 325 aa8□□□□□ -1.13
LCP5YER127W PET127P32606 800 aa8□□□□□ -1.13
LCP5YER127W NOP2P40991 618 aaKnown RBP8□□□□□ -1.13
LCP5YER127W ECM38Q05902 660 aaPredicted RBP8□□□□□ -1.13
LCP5YER127W VPS36Q06696 566 aa8□□□□□ -1.13
LCP5YER127W DIA2Q08496 732 aaPredicted RBP8□□□□□ -1.13
LCP5YER127W ATG11Q12527 1178 aa8□□□□□ -1.13
LCP5YER127W ECM3Q99252 613 aa8□□□□□ -1.13
LCP5YER127W HRP1Q99383 534 aaKnown RBP8□□□□□ -1.13
LCP5YER127W MYO4P32492 1471 aa8□□□□□ -1.13
LCP5YER127W STH1P32597 1359 aa7.99□□□□□ -1.13
LCP5YER127W HRR25P29295 494 aaKnown RBP7.99□□□□□ -1.13
LCP5YER127W EFT1P32324 842 aaKnown RBP7.99□□□□□ -1.13
LCP5YER127W DGR2P32330 852 aa7.99□□□□□ -1.13
LCP5YER127W PEA2P40091 420 aa7.99□□□□□ -1.13
LCP5YER127W IRC24P40580 263 aa7.99□□□□□ -1.13
LCP5YER127W NYV1Q12255 253 aa7.99□□□□□ -1.13
LCP5YER127W VTH1P40438 1549 aa7.98□□□□□ -1.13
LCP5YER127W VTH2P40890 1549 aa7.98□□□□□ -1.13
LCP5YER127W ERG4P25340 473 aa7.98□□□□□ -1.13
LCP5YER127W ATG36P46983 293 aa7.98□□□□□ -1.13
LCP5YER127W NOP9P47077 666 aaKnown RBP7.98□□□□□ -1.13
LCP5YER127W BUL1P48524 976 aa7.98□□□□□ -1.13
LCP5YER127W HMO1Q03973 246 aaKnown RBP7.98□□□□□ -1.13
LCP5YER127W VBA4Q04602 768 aaKnown RBP7.98□□□□□ -1.13
LCP5YER127W PEX15Q08215 383 aa7.98□□□□□ -1.13
LCP5YER127W NTO1Q12311 748 aa7.98□□□□□ -1.13
LCP5YER127W TRM13Q12383 476 aa7.98□□□□□ -1.13
LCP5YER127W YRF1-1P0CX20 1796 aa7.97□□□□□ -1.13
LCP5YER127W YRF1-5P0CX21 1796 aa7.97□□□□□ -1.13
LCP5YER127W YRF1-8P0CX22 1796 aa7.97□□□□□ -1.13
LCP5YER127W ERG20P08524 352 aaKnown RBP7.97□□□□□ -1.13
LCP5YER127W RSC8P43609 557 aaKnown RBP7.97□□□□□ -1.13
LCP5YER127W STP4Q07351 490 aa7.97□□□□□ -1.13
LCP5YER127W ESC8Q08119 714 aa7.97□□□□□ -1.13
LCP5YER127W NGL1Q08213 363 aaKnown RBP7.97□□□□□ -1.13
LCP5YER127W CDC26P14724 124 aa7.96□□□□□ -1.14
LCP5YER127W SEC15P22224 910 aa7.96□□□□□ -1.14
LCP5YER127W HIR1P32479 840 aa7.96□□□□□ -1.14
LCP5YER127W HIS7P33734 552 aaKnown RBP7.96□□□□□ -1.14
LCP5YER127W YBR053CP38235 358 aa7.96□□□□□ -1.14
LCP5YER127W LYS9P38999 446 aa7.96□□□□□ -1.14
LCP5YER127W GET2P40056 285 aa7.96□□□□□ -1.14
LCP5YER127W HOS4P40480 1083 aa7.96□□□□□ -1.14
LCP5YER127W PXA1P41909 870 aa7.96□□□□□ -1.14
LCP5YER127W RCR2Q03446 210 aaKnown RBP7.96□□□□□ -1.14
LCP5YER127W FRE5Q08908 694 aa7.96□□□□□ -1.14
LCP5YER127W SEC6P32844 805 aa7.95□□□□□ -1.14
LCP5YER127W NIC96P34077 839 aa7.95□□□□□ -1.14
LCP5YER127W KTR4P38131 464 aa7.95□□□□□ -1.14
LCP5YER127W IES1P43579 692 aa7.95□□□□□ -1.14
LCP5YER127W SNT2P53127 1403 aa7.95□□□□□ -1.14
LCP5YER127W RPS9BP05755 195 aaKnown RBP7.94□□□□□ -1.14
LCP5YER127W SST2P11972 698 aaKnown RBP7.94□□□□□ -1.14
LCP5YER127W HXT4P32467 576 aa7.94□□□□□ -1.14
LCP5YER127W DEF1P35732 738 aaKnown RBP7.94□□□□□ -1.14
LCP5YER127W SUL1P38359 859 aa7.94□□□□□ -1.14
LCP5YER127W NUP60P39705 539 aa7.94□□□□□ -1.14
LCP5YER127W BAP3P41815 604 aa7.94□□□□□ -1.14
LCP5YER127W TAF1P46677 1066 aa7.94□□□□□ -1.14
LCP5YER127W BIT61P47041 543 aa7.94□□□□□ -1.14
LCP5YER127W RNT1Q02555 471 aa7.94□□□□□ -1.14
LCP5YER127W CWC2Q12046 339 aaPredicted RBP7.94□□□□□ -1.14
LCP5YER127W NTE1Q04958 1679 aa7.94□□□□□ -1.14
LCP5YER127W TY1B-JR2P47100 1755 aaKnown RBP7.94□□□□□ -1.14
LCP5YER127W TY1B-ER2Q03619 1755 aa7.94□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 50.5 ms