RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C SPO14P36126 1683 aa1.54□□□□□ -2.16
SWI4YER111C DNF3Q12674 1656 aa1.54□□□□□ -2.16
SWI4YER111C MSM1P22438 575 aa1.54□□□□□ -2.16
SWI4YER111C CLB4P24871 460 aa1.54□□□□□ -2.16
SWI4YER111C EMC1P25574 760 aa1.54□□□□□ -2.16
SWI4YER111C CHS3P29465 1165 aa1.54□□□□□ -2.16
SWI4YER111C RAD16P31244 790 aa1.54□□□□□ -2.16
SWI4YER111C TAF5P38129 798 aa1.54□□□□□ -2.16
SWI4YER111C PSY4P38193 441 aa1.54□□□□□ -2.16
SWI4YER111C BEM4P39011 633 aa1.54□□□□□ -2.16
SWI4YER111C SMK1P41808 388 aa1.54□□□□□ -2.16
SWI4YER111C PXA1P41909 870 aa1.54□□□□□ -2.16
SWI4YER111C YJR039WP47107 1121 aa1.54□□□□□ -2.16
SWI4YER111C MOT3P54785 490 aaKnown RBP1.54□□□□□ -2.16
SWI4YER111C CEG1Q01159 459 aaPredicted RBP1.54□□□□□ -2.16
SWI4YER111C DIA2Q08496 732 aaPredicted RBP1.54□□□□□ -2.16
SWI4YER111C PSF3Q12146 194 aa1.54□□□□□ -2.16
SWI4YER111C ARP7Q12406 477 aa1.54□□□□□ -2.16
SWI4YER111C KCS1Q12494 1050 aa1.54□□□□□ -2.16
SWI4YER111C TRP3P00937 484 aa1.53□□□□□ -2.16
SWI4YER111C VAS1P07806 1104 aaKnown RBP1.53□□□□□ -2.16
SWI4YER111C ADH4P10127 382 aa1.53□□□□□ -2.16
SWI4YER111C FRS1P15624 595 aaKnown RBP1.53□□□□□ -2.16
SWI4YER111C LAM1P38851 1228 aa1.53□□□□□ -2.16
SWI4YER111C CTF8P38877 133 aa1.53□□□□□ -2.16
SWI4YER111C TMA108P40462 946 aa1.53□□□□□ -2.16
SWI4YER111C MNT3P40549 630 aa1.53□□□□□ -2.16
SWI4YER111C FKH2P41813 862 aa1.53□□□□□ -2.16
SWI4YER111C ENP2P48234 707 aaKnown RBP1.53□□□□□ -2.16
SWI4YER111C SPT20P50875 604 aa1.53□□□□□ -2.16
SWI4YER111C PLB2Q03674 706 aa1.53□□□□□ -2.16
SWI4YER111C VBA4Q04602 768 aaKnown RBP1.53□□□□□ -2.16
SWI4YER111C SGD1Q06132 899 aa1.53□□□□□ -2.16
SWI4YER111C RXT3Q07458 294 aa1.53□□□□□ -2.16
SWI4YER111C MED7Q08278 222 aa1.53□□□□□ -2.16
SWI4YER111C NEW1Q08972 1196 aaKnown RBP1.53□□□□□ -2.16
SWI4YER111C PUS1Q12211 544 aaKnown RBP1.53□□□□□ -2.16
SWI4YER111C RIB2Q12362 591 aaKnown RBP1.53□□□□□ -2.16
SWI4YER111C LPX1Q12405 387 aaKnown RBP1.53□□□□□ -2.16
SWI4YER111C ECM3Q99252 613 aa1.53□□□□□ -2.16
SWI4YER111C YLR415CO13578 112 aa1.53□□□□□ -2.16
SWI4YER111C MSS18P08593 268 aa1.53□□□□□ -2.16
SWI4YER111C MIS1P09440 975 aaKnown RBP1.53□□□□□ -2.16
SWI4YER111C PCK1P10963 549 aa1.53□□□□□ -2.16
SWI4YER111C RER1P25560 188 aa1.53□□□□□ -2.16
SWI4YER111C MCM10P32354 571 aa1.53□□□□□ -2.16
SWI4YER111C RPT3P33298 428 aaKnown RBP1.53□□□□□ -2.16
SWI4YER111C ATG19P35193 415 aa1.53□□□□□ -2.16
SWI4YER111C MRPL36P36531 177 aa1.53□□□□□ -2.16
SWI4YER111C POL12P38121 705 aaPredicted RBP1.53□□□□□ -2.16
SWI4YER111C SRP68P38687 599 aaKnown RBP1.53□□□□□ -2.16
SWI4YER111C MTD1Q02046 320 aaKnown RBP1.53□□□□□ -2.16
SWI4YER111C PPN1Q04119 674 aa1.53□□□□□ -2.16
SWI4YER111C SIZ1Q04195 904 aa1.53□□□□□ -2.16
SWI4YER111C YPS7Q06325 596 aa1.53□□□□□ -2.16
SWI4YER111C UPC2Q12151 913 aa1.53□□□□□ -2.16
SWI4YER111C ATG11Q12527 1178 aa1.53□□□□□ -2.16
SWI4YER111C APM4Q99186 491 aa1.53□□□□□ -2.16
SWI4YER111C RPO21P04050 1733 aaKnown RBP1.53□□□□□ -2.16
SWI4YER111C CTT1P06115 562 aa1.53□□□□□ -2.17
SWI4YER111C ERG20P08524 352 aaKnown RBP1.53□□□□□ -2.17
SWI4YER111C PET309P32522 965 aaPredicted RBP1.53□□□□□ -2.17
SWI4YER111C MPE1P35728 441 aaKnown RBP1.53□□□□□ -2.17
SWI4YER111C YBR259WP38338 688 aa1.53□□□□□ -2.17
SWI4YER111C ICP55P40051 511 aa1.53□□□□□ -2.17
SWI4YER111C TAF4P50105 388 aa1.53□□□□□ -2.17
SWI4YER111C SNO2P53823 222 aa1.53□□□□□ -2.17
SWI4YER111C ASI2P53895 289 aa1.53□□□□□ -2.17
SWI4YER111C MDM1Q01846 1127 aa1.53□□□□□ -2.17
SWI4YER111C MRPL13Q02204 264 aa1.53□□□□□ -2.17
SWI4YER111C REC102Q02721 264 aa1.53□□□□□ -2.17
SWI4YER111C GAD1Q04792 585 aa1.53□□□□□ -2.17
SWI4YER111C VPS36Q06696 566 aa1.53□□□□□ -2.17
SWI4YER111C SSP2Q08646 371 aa1.53□□□□□ -2.17
SWI4YER111C PHO5P00635 467 aa1.52□□□□□ -2.17
SWI4YER111C HIS5P07172 385 aa1.52□□□□□ -2.17
SWI4YER111C SEC12P11655 471 aa1.52□□□□□ -2.17
SWI4YER111C POL3P15436 1097 aa1.52□□□□□ -2.17
SWI4YER111C HOP1P20050 605 aa1.52□□□□□ -2.17
SWI4YER111C ADE2P21264 571 aaKnown RBP1.52□□□□□ -2.17
SWI4YER111C SEC21P32074 935 aaKnown RBP1.52□□□□□ -2.17
SWI4YER111C PET127P32606 800 aa1.52□□□□□ -2.17
SWI4YER111C RPP1P38786 293 aa1.52□□□□□ -2.17
SWI4YER111C SVL3Q03088 825 aaKnown RBP1.52□□□□□ -2.17
SWI4YER111C AIM41Q12032 185 aa1.52□□□□□ -2.17
SWI4YER111C TY2B-LR1P0C2J3 1770 aa1.52□□□□□ -2.17
SWI4YER111C TY2B-FP0CX63 1770 aa1.52□□□□□ -2.17
SWI4YER111C TY2B-GR2P0CX64 1770 aa1.52□□□□□ -2.17
SWI4YER111C TY2B-CP25384 1770 aa1.52□□□□□ -2.17
SWI4YER111C TY2B-DR2Q03494 1770 aa1.52□□□□□ -2.17
SWI4YER111C TY1B-DR1Q03855 1755 aa1.52□□□□□ -2.17
SWI4YER111C TY2B-DR3Q07791 1770 aaKnown RBP1.52□□□□□ -2.17
SWI4YER111C TY2B-OR1Q12113 1770 aa1.52□□□□□ -2.17
SWI4YER111C TY2B-DR1Q12472 1770 aa1.52□□□□□ -2.17
SWI4YER111C TY2B-OR2Q12501 1770 aa1.52□□□□□ -2.17
SWI4YER111C HIS7P33734 552 aaKnown RBP1.52□□□□□ -2.17
SWI4YER111C SEG2P34250 1132 aa1.52□□□□□ -2.17
SWI4YER111C MEF2P39677 819 aa1.52□□□□□ -2.17
SWI4YER111C SWD1P39706 426 aa1.52□□□□□ -2.17
SWI4YER111C YEL068CP39977 110 aa1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms