RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C YML133CQ03099 1374 aa5.44□□□□□ -1.54
NUP42YDR192C YLL067CQ07888 1374 aa5.44□□□□□ -1.54
NUP42YDR192C YLL066CQ99208 1374 aa5.44□□□□□ -1.54
NUP42YDR192C TUB3P09734 445 aaKnown RBP5.44□□□□□ -1.54
NUP42YDR192C TOD6P34219 525 aa5.44□□□□□ -1.54
NUP42YDR192C APN2P38207 520 aa5.44□□□□□ -1.54
NUP42YDR192C NIT2P47016 307 aa5.44□□□□□ -1.54
NUP42YDR192C YJR008WP47085 338 aa5.44□□□□□ -1.54
NUP42YDR192C YJR120WP47157 116 aa5.44□□□□□ -1.54
NUP42YDR192C PRP31P49704 494 aaPredicted RBP5.44□□□□□ -1.54
NUP42YDR192C YHM2Q04013 314 aa5.44□□□□□ -1.54
NUP42YDR192C MCM21Q06675 368 aa5.44□□□□□ -1.54
NUP42YDR192C YDL144CQ07589 356 aa5.44□□□□□ -1.54
NUP42YDR192C GPR1Q12361 961 aa5.44□□□□□ -1.54
NUP42YDR192C RPS24AP0CX31 135 aaKnown RBP5.43□□□□□ -1.54
NUP42YDR192C RPS24BP0CX32 135 aaKnown RBP5.43□□□□□ -1.54
NUP42YDR192C APL2P36000 726 aaPredicted RBP5.43□□□□□ -1.54
NUP42YDR192C GPP2P40106 250 aaKnown RBP5.43□□□□□ -1.54
NUP42YDR192C SET2P46995 733 aaKnown RBP5.43□□□□□ -1.54
NUP42YDR192C EXG2P52911 562 aa5.43□□□□□ -1.54
NUP42YDR192C REC102Q02721 264 aa5.43□□□□□ -1.54
NUP42YDR192C SKY1Q03656 742 aa5.43□□□□□ -1.54
NUP42YDR192C HFI1Q12060 488 aa5.43□□□□□ -1.54
NUP42YDR192C KAR1P11927 433 aa5.42□□□□□ -1.54
NUP42YDR192C CAD1P24813 409 aaKnown RBP5.42□□□□□ -1.54
NUP42YDR192C KAR4P25583 335 aa5.42□□□□□ -1.54
NUP42YDR192C PRP45P28004 379 aaPredicted RBP5.42□□□□□ -1.54
NUP42YDR192C CTF13P35203 478 aa5.42□□□□□ -1.54
NUP42YDR192C OAF3P36023 863 aa5.42□□□□□ -1.54
NUP42YDR192C RPP1P38786 293 aa5.42□□□□□ -1.54
NUP42YDR192C MSS4P38994 779 aa5.42□□□□□ -1.54
NUP42YDR192C GID8P40208 455 aa5.42□□□□□ -1.54
NUP42YDR192C BUD27P43573 796 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
NUP42YDR192C RNR4P49723 345 aaKnown RBP5.42□□□□□ -1.54
NUP42YDR192C MNN10P50108 393 aaKnown RBP5.42□□□□□ -1.54
NUP42YDR192C PEX8P53248 589 aa5.42□□□□□ -1.54
NUP42YDR192C ARP4P80428 489 aa5.42□□□□□ -1.54
NUP42YDR192C NRG1Q03125 231 aa5.42□□□□□ -1.54
NUP42YDR192C ATG11Q12527 1178 aa5.42□□□□□ -1.54
NUP42YDR192C MLP1Q02455 1875 aaKnown RBP5.41□□□□□ -1.54
NUP42YDR192C SWI6P09959 803 aa5.41□□□□□ -1.54
NUP42YDR192C SEC65P29478 273 aa5.41□□□□□ -1.54
NUP42YDR192C LST4P34239 828 aa5.41□□□□□ -1.54
NUP42YDR192C HXT6P39003 570 aaKnown RBP5.41□□□□□ -1.54
NUP42YDR192C HXT7P39004 570 aa5.41□□□□□ -1.54
NUP42YDR192C BEM4P39011 633 aa5.41□□□□□ -1.54
NUP42YDR192C MAM1P40065 302 aa5.41□□□□□ -1.54
NUP42YDR192C ENP2P48234 707 aaKnown RBP5.41□□□□□ -1.54
NUP42YDR192C SLD3P53135 668 aa5.41□□□□□ -1.54
NUP42YDR192C SPC105P53148 917 aa5.41□□□□□ -1.54
NUP42YDR192C RTS3P53289 263 aa5.41□□□□□ -1.54
NUP42YDR192C BRE5P53741 515 aaKnown RBP5.41□□□□□ -1.54
NUP42YDR192C ARG5,6Q01217 863 aa5.41□□□□□ -1.54
NUP42YDR192C TMA10Q06177 86 aa5.41□□□□□ -1.54
NUP42YDR192C YPR027CQ12079 277 aa5.41□□□□□ -1.54
NUP42YDR192C ADE6P38972 1358 aaKnown RBP5.41□□□□□ -1.54
NUP42YDR192C PRD1P25375 712 aa5.4□□□□□ -1.54
NUP42YDR192C AKL1P38080 1108 aaKnown RBP5.4□□□□□ -1.54
NUP42YDR192C BIT2P38346 545 aa5.4□□□□□ -1.54
NUP42YDR192C AVT1P47082 602 aa5.4□□□□□ -1.54
NUP42YDR192C YMR210WQ03649 449 aa5.4□□□□□ -1.54
NUP42YDR192C GAD1Q04792 585 aa5.4□□□□□ -1.54
NUP42YDR192C YOL057WQ08225 711 aa5.4□□□□□ -1.54
NUP42YDR192C RPO41P13433 1351 aaKnown RBP5.4□□□□□ -1.55
NUP42YDR192C ATP4P05626 244 aa5.39□□□□□ -1.55
NUP42YDR192C YEF3P16521 1044 aaKnown RBP5.39□□□□□ -1.55
NUP42YDR192C PRP4P20053 465 aaKnown RBP5.39□□□□□ -1.55
NUP42YDR192C PLC1P32383 869 aa5.39□□□□□ -1.55
NUP42YDR192C TRZ1P36159 838 aaPredicted RBP5.39□□□□□ -1.55
NUP42YDR192C YHR202WP38887 602 aa5.39□□□□□ -1.55
NUP42YDR192C PEA2P40091 420 aa5.39□□□□□ -1.55
NUP42YDR192C AMA1P50082 593 aa5.39□□□□□ -1.55
NUP42YDR192C MCM6P53091 1017 aaKnown RBP5.39□□□□□ -1.55
NUP42YDR192C SLU7Q02775 382 aaKnown RBP5.39□□□□□ -1.55
NUP42YDR192C ASM4Q05166 528 aa5.39□□□□□ -1.55
NUP42YDR192C HIM1Q06674 414 aa5.39□□□□□ -1.55
NUP42YDR192C PEX15Q08215 383 aa5.39□□□□□ -1.55
NUP42YDR192C SLM3Q12093 417 aa5.39□□□□□ -1.55
NUP42YDR192C SLX4Q12098 748 aa5.39□□□□□ -1.55
NUP42YDR192C RRP5Q05022 1729 aaKnown RBP5.39□□□□□ -1.55
NUP42YDR192C TRP4P07285 380 aaPredicted RBP5.38□□□□□ -1.55
NUP42YDR192C MET3P08536 511 aa5.38□□□□□ -1.55
NUP42YDR192C PYC1P11154 1178 aaKnown RBP5.38□□□□□ -1.55
NUP42YDR192C PFK1P16861 987 aaKnown RBP5.38□□□□□ -1.55
NUP42YDR192C ADE2P21264 571 aaKnown RBP5.38□□□□□ -1.55
NUP42YDR192C DCG1P32460 244 aa5.38□□□□□ -1.55
NUP42YDR192C TFC4P33339 1025 aa5.38□□□□□ -1.55
NUP42YDR192C NUG1P40010 520 aaKnown RBP5.38□□□□□ -1.55
NUP42YDR192C TPM2P40414 161 aa5.38□□□□□ -1.55
NUP42YDR192C YNL050CP53952 270 aa5.38□□□□□ -1.55
NUP42YDR192C CLU1Q03690 1277 aaKnown RBP5.38□□□□□ -1.55
NUP42YDR192C PHM6Q05637 104 aa5.38□□□□□ -1.55
NUP42YDR192C RPS21BQ3E754 87 aaKnown RBP5.38□□□□□ -1.55
NUP42YDR192C COX11P19516 300 aaKnown RBP5.37□□□□□ -1.55
NUP42YDR192C RNQ1P25367 405 aa5.37□□□□□ -1.55
NUP42YDR192C PET127P32606 800 aa5.37□□□□□ -1.55
NUP42YDR192C RPN11P43588 306 aaKnown RBP5.37□□□□□ -1.55
NUP42YDR192C MPP10P47083 593 aaKnown RBP5.37□□□□□ -1.55
NUP42YDR192C DSD1P53095 428 aa5.37□□□□□ -1.55
NUP42YDR192C CTK1Q03957 528 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 105.1 ms