RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTP1	YDL230W	MXR1	P40029	184 aa		12.89	□□□□□ -0.35
PTP1	YDL230W	RPT2	P40327	437 aa	Known RBP	12.89	□□□□□ -0.35
PTP1	YDL230W	ALA1	P40825	983 aa	Known RBP	12.89	□□□□□ -0.35
PTP1	YDL230W	RGD2	P43556	714 aa		12.89	□□□□□ -0.35
PTP1	YDL230W	YDR338C	Q05497	695 aa		12.89	□□□□□ -0.35
PTP1	YDL230W	KAP95	Q06142	861 aa	Known RBP	12.89	□□□□□ -0.35
PTP1	YDL230W	YPR027C	Q12079	277 aa		12.89	□□□□□ -0.35
PTP1	YDL230W	YRR1	Q12172	810 aa		12.89	□□□□□ -0.35
PTP1	YDL230W	GLN3	P18494	730 aa		12.88	□□□□□ -0.35
PTP1	YDL230W	DBP1	P24784	617 aa	Known RBP	12.88	□□□□□ -0.35
PTP1	YDL230W	VBA3	P25594	458 aa		12.88	□□□□□ -0.35
PTP1	YDL230W	SEC1	P30619	724 aa	Known RBP	12.88	□□□□□ -0.35
PTP1	YDL230W	BCS1	P32839	456 aa		12.88	□□□□□ -0.35
PTP1	YDL230W	SQT1	P35184	431 aa		12.88	□□□□□ -0.35
PTP1	YDL230W	VBA5	P36172	582 aa		12.88	□□□□□ -0.35
PTP1	YDL230W	AGP2	P38090	596 aa		12.88	□□□□□ -0.35
PTP1	YDL230W	MED8	P38304	223 aa		12.88	□□□□□ -0.35
PTP1	YDL230W	YHR054C	P38780	354 aa		12.88	□□□□□ -0.35
PTP1	YDL230W	RSC30	P38781	883 aa		12.88	□□□□□ -0.35
PTP1	YDL230W	FLC2	P39719	783 aa		12.88	□□□□□ -0.35
PTP1	YDL230W	ARG2	P40360	574 aa		12.88	□□□□□ -0.35
PTP1	YDL230W	TMA108	P40462	946 aa		12.88	□□□□□ -0.35
PTP1	YDL230W	ADA2	Q02336	434 aa		12.88	□□□□□ -0.35
PTP1	YDL230W	SXM1	Q04175	944 aa	Known RBP	12.88	□□□□□ -0.35
PTP1	YDL230W	YMR027W	Q04371	470 aa		12.88	□□□□□ -0.35
PTP1	YDL230W	PRM6	Q04705	352 aa		12.88	□□□□□ -0.35
PTP1	YDL230W	THI7	Q05998	598 aa		12.88	□□□□□ -0.35
PTP1	YDL230W	CHS1	P08004	1131 aa		12.87	□□□□□ -0.35
PTP1	YDL230W	PDR1	P12383	1068 aa		12.87	□□□□□ -0.35
PTP1	YDL230W	MSS51	P32335	436 aa		12.87	□□□□□ -0.35
PTP1	YDL230W	MOT2	P34909	587 aa	Known RBP	12.87	□□□□□ -0.35
PTP1	YDL230W	SWC5	P38326	303 aa		12.87	□□□□□ -0.35
PTP1	YDL230W	GEM1	P39722	662 aa		12.87	□□□□□ -0.35
PTP1	YDL230W	TDA10	P42938	290 aa		12.87	□□□□□ -0.35
PTP1	YDL230W	ALG11	P53954	548 aa	Known RBP	12.87	□□□□□ -0.35
PTP1	YDL230W	YNL040W	P53960	456 aa	Predicted RBP	12.87	□□□□□ -0.35
PTP1	YDL230W	ARO80	Q04052	950 aa		12.87	□□□□□ -0.35
PTP1	YDL230W	DOT1	Q04089	582 aa	Known RBP	12.87	□□□□□ -0.35
PTP1	YDL230W	AIM39	Q08223	395 aa		12.87	□□□□□ -0.35
PTP1	YDL230W	TRE1	Q08919	783 aa		12.87	□□□□□ -0.35
PTP1	YDL230W	FAP7	Q12055	197 aa	Predicted RBP	12.87	□□□□□ -0.35
PTP1	YDL230W	SLY1	P22213	666 aa		12.86	□□□□□ -0.35
PTP1	YDL230W	SAT4	P25333	603 aa	Known RBP	12.86	□□□□□ -0.35
PTP1	YDL230W	MEI4	P29467	408 aa		12.86	□□□□□ -0.35
PTP1	YDL230W	YER186C	P40101	306 aa		12.86	□□□□□ -0.35
PTP1	YDL230W	YIL054W	P40524	105 aa		12.86	□□□□□ -0.35
PTP1	YDL230W	SKP2	P42843	763 aa		12.86	□□□□□ -0.35
PTP1	YDL230W	CDC55	Q00362	526 aa		12.86	□□□□□ -0.35
PTP1	YDL230W	CDC73	Q06697	393 aa		12.86	□□□□□ -0.35
PTP1	YDL230W	TAF10	Q12030	206 aa		12.86	□□□□□ -0.35
PTP1	YDL230W	PCD1	Q12524	340 aa		12.86	□□□□□ -0.35
PTP1	YDL230W	PUT4	P15380	627 aa		12.85	□□□□□ -0.35
PTP1	YDL230W	ADE2	P21264	571 aa	Known RBP	12.85	□□□□□ -0.35
PTP1	YDL230W	GPT2	P36148	743 aa		12.85	□□□□□ -0.35
PTP1	YDL230W	NOP4	P37838	685 aa	Known RBP	12.85	□□□□□ -0.35
PTP1	YDL230W	YMC2	P38087	329 aa		12.85	□□□□□ -0.35
PTP1	YDL230W	BRE5	P53741	515 aa	Known RBP	12.85	□□□□□ -0.35
PTP1	YDL230W	YNL035C	P53962	389 aa	Known RBP	12.85	□□□□□ -0.35
PTP1	YDL230W	MZM1	Q03429	123 aa	Predicted RBP	12.85	□□□□□ -0.35
PTP1	YDL230W	VPS54	Q12071	889 aa		12.85	□□□□□ -0.35
PTP1	YDL230W	ARG1	P22768	420 aa		12.84	□□□□□ -0.35
PTP1	YDL230W	YCR015C	P25616	317 aa		12.84	□□□□□ -0.35
PTP1	YDL230W	MSR1	P38714	643 aa		12.84	□□□□□ -0.35
PTP1	YDL230W	LAM5	P43560	674 aa		12.84	□□□□□ -0.35
PTP1	YDL230W	STB4	P50104	949 aa		12.84	□□□□□ -0.35
PTP1	YDL230W	DAK1	P54838	584 aa	Known RBP	12.84	□□□□□ -0.35
PTP1	YDL230W	CUS1	Q02554	436 aa	Predicted RBP	12.84	□□□□□ -0.35
PTP1	YDL230W	YLR225C	Q05948	407 aa	Known RBP	12.84	□□□□□ -0.35
PTP1	YDL230W	DIS3	Q08162	1001 aa	Known RBP	12.84	□□□□□ -0.35
PTP1	YDL230W	BAS1	P22035	811 aa		12.83	□□□□□ -0.36
PTP1	YDL230W	MRPL25	P23369	157 aa		12.83	□□□□□ -0.36
PTP1	YDL230W	HXT3	P32466	567 aa	Known RBP	12.83	□□□□□ -0.36
PTP1	YDL230W	RPT1	P33299	467 aa	Known RBP	12.83	□□□□□ -0.36
PTP1	YDL230W	SRB2	P34162	210 aa		12.83	□□□□□ -0.36
PTP1	YDL230W	ABZ1	P37254	787 aa	Predicted RBP	12.83	□□□□□ -0.36
PTP1	YDL230W	TBS1	P38114	1094 aa		12.83	□□□□□ -0.36
PTP1	YDL230W	YBR032W	P38223	100 aa		12.83	□□□□□ -0.36
PTP1	YDL230W	AVT2	P39981	480 aa		12.83	□□□□□ -0.36
PTP1	YDL230W	YJR054W	P47114	497 aa		12.83	□□□□□ -0.36
PTP1	YDL230W	HLJ1	P48353	224 aa		12.83	□□□□□ -0.36
PTP1	YDL230W	YML020W	Q03722	664 aa		12.83	□□□□□ -0.36
PTP1	YDL230W	NOB1	Q08444	459 aa	Known RBP	12.83	□□□□□ -0.36
PTP1	YDL230W	RIB2	Q12362	591 aa	Known RBP	12.83	□□□□□ -0.36
PTP1	YDL230W	CTF3	Q12748	733 aa		12.83	□□□□□ -0.36
PTP1	YDL230W	RIF1	P29539	1916 aa		12.83	□□□□□ -0.36
PTP1	YDL230W	YMR085W	P0CF18	432 aa		12.82	□□□□□ -0.36
PTP1	YDL230W	AFT1	P22149	690 aa		12.82	□□□□□ -0.36
PTP1	YDL230W	KAR4	P25583	335 aa		12.82	□□□□□ -0.36
PTP1	YDL230W	APN2	P38207	520 aa		12.82	□□□□□ -0.36
PTP1	YDL230W	SMF2	P38778	549 aa		12.82	□□□□□ -0.36
PTP1	YDL230W	SPC97	P38863	823 aa		12.82	□□□□□ -0.36
PTP1	YDL230W	TFG1	P41895	735 aa	Predicted RBP	12.82	□□□□□ -0.36
PTP1	YDL230W	UBX4	P54730	416 aa		12.82	□□□□□ -0.36
PTP1	YDL230W	MUK1	Q02866	612 aa		12.82	□□□□□ -0.36
PTP1	YDL230W	TDA5	Q06417	326 aa	Known RBP	12.82	□□□□□ -0.36
PTP1	YDL230W	MDM38	Q08179	573 aa		12.82	□□□□□ -0.36
PTP1	YDL230W	PUS1	Q12211	544 aa	Known RBP	12.82	□□□□□ -0.36
PTP1	YDL230W	PMR1	P13586	950 aa		12.81	□□□□□ -0.36
PTP1	YDL230W	SNA3	P14359	133 aa		12.81	□□□□□ -0.36
PTP1	YDL230W	INP51	P40559	946 aa	Known RBP	12.81	□□□□□ -0.36

Retrieved 100 of 5,963 RNA–protein pairs in 222.3 ms