RNA–Protein interactions for RNA: YCR067C

SED4, Transcript of Integral ER membrane protein that stimulates Sar1p GTPase activity, yeast

Gene SED4, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SED4	YCR067C	ILS1	P09436	1072 aa	Known RBP	5.2	□□□□□ -1.58
SED4	YCR067C	TUB3	P09734	445 aa	Known RBP	5.2	□□□□□ -1.58
SED4	YCR067C	CNA1	P23287	553 aa		5.2	□□□□□ -1.58
SED4	YCR067C	DBF4	P32325	704 aa		5.2	□□□□□ -1.58
SED4	YCR067C	EXO5	P38289	585 aa		5.2	□□□□□ -1.58
SED4	YCR067C	PCA1	P38360	1216 aa		5.2	□□□□□ -1.58
SED4	YCR067C	PIP2	P52960	996 aa		5.2	□□□□□ -1.58
SED4	YCR067C	SCM3	Q12334	223 aa		5.2	□□□□□ -1.58
SED4	YCR067C	SEC63	P14906	663 aa		5.2	□□□□□ -1.58
SED4	YCR067C	PRP6	P19735	899 aa	Predicted RBP	5.2	□□□□□ -1.58
SED4	YCR067C	MET4	P32389	672 aa		5.2	□□□□□ -1.58
SED4	YCR067C	BEM3	P32873	1128 aa		5.2	□□□□□ -1.58
SED4	YCR067C	PRP40	P33203	583 aa	Known RBP	5.2	□□□□□ -1.58
SED4	YCR067C	KAP104	P38217	918 aa	Known RBP	5.2	□□□□□ -1.58
SED4	YCR067C	SPR3	P41901	512 aa		5.2	□□□□□ -1.58
SED4	YCR067C	GPR1	Q12361	961 aa		5.2	□□□□□ -1.58
SED4	YCR067C	SBP1	P10080	294 aa	Known RBP	5.19	□□□□□ -1.58
SED4	YCR067C	RAD14	P28519	371 aa		5.19	□□□□□ -1.58
SED4	YCR067C	EFT1	P32324	842 aa	Known RBP	5.19	□□□□□ -1.58
SED4	YCR067C	GGA2	P38817	585 aa	Known RBP	5.19	□□□□□ -1.58
SED4	YCR067C	STN1	P38960	494 aa		5.19	□□□□□ -1.58
SED4	YCR067C	ARG2	P40360	574 aa		5.19	□□□□□ -1.58
SED4	YCR067C	YJR054W	P47114	497 aa		5.19	□□□□□ -1.58
SED4	YCR067C	FMS1	P50264	508 aa		5.19	□□□□□ -1.58
SED4	YCR067C	NUP84	P52891	726 aa		5.19	□□□□□ -1.58
SED4	YCR067C	DCP2	P53550	970 aa	Known RBP	5.19	□□□□□ -1.58
SED4	YCR067C	JJJ1	P53863	590 aa		5.19	□□□□□ -1.58
SED4	YCR067C	KTR5	P53966	522 aa	Predicted RBP	5.19	□□□□□ -1.58
SED4	YCR067C	OYE2	Q03558	400 aa	Known RBP	5.19	□□□□□ -1.58
SED4	YCR067C	SPO71	Q03868	1245 aa		5.19	□□□□□ -1.58
SED4	YCR067C	WHI4	Q07655	649 aa	Known RBP	5.19	□□□□□ -1.58
SED4	YCR067C	MST1	P07236	462 aa		5.19	□□□□□ -1.58
SED4	YCR067C	SRM1	P21827	482 aa		5.19	□□□□□ -1.58
SED4	YCR067C	MRF1	P30775	413 aa	Predicted RBP	5.19	□□□□□ -1.58
SED4	YCR067C	TYE7	P33122	291 aa	Predicted RBP	5.19	□□□□□ -1.58
SED4	YCR067C	RIM2	P38127	377 aa		5.19	□□□□□ -1.58
SED4	YCR067C	FES1	P38260	290 aa		5.19	□□□□□ -1.58
SED4	YCR067C	YJL055W	P47044	245 aa		5.19	□□□□□ -1.58
SED4	YCR067C	RSM26	P47141	266 aa		5.19	□□□□□ -1.58
SED4	YCR067C	RPT4	P53549	437 aa	Known RBP	5.19	□□□□□ -1.58
SED4	YCR067C	ARK1	P53974	638 aa		5.19	□□□□□ -1.58
SED4	YCR067C	CWC15	Q03772	175 aa	Known RBP	5.19	□□□□□ -1.58
SED4	YCR067C	SMD2	Q06217	110 aa	Known RBP	5.19	□□□□□ -1.58
SED4	YCR067C	ARR1	Q06596	294 aa		5.19	□□□□□ -1.58
SED4	YCR067C	ADY3	Q07732	790 aa		5.19	□□□□□ -1.58
SED4	YCR067C	ATG11	Q12527	1178 aa		5.19	□□□□□ -1.58
SED4	YCR067C	BI2	P03873	423 aa		5.18	□□□□□ -1.58
SED4	YCR067C	BI4	P03879	638 aa		5.18	□□□□□ -1.58
SED4	YCR067C	IMA3	P0CW40	589 aa		5.18	□□□□□ -1.58
SED4	YCR067C	IMA4	P0CW41	589 aa		5.18	□□□□□ -1.58
SED4	YCR067C	AEP2	P22136	580 aa		5.18	□□□□□ -1.58
SED4	YCR067C	RPC19	P28000	142 aa	Known RBP	5.18	□□□□□ -1.58
SED4	YCR067C	CHS3	P29465	1165 aa		5.18	□□□□□ -1.58
SED4	YCR067C	TMT1	P32643	299 aa		5.18	□□□□□ -1.58
SED4	YCR067C	YSC84	P32793	468 aa		5.18	□□□□□ -1.58
SED4	YCR067C	UGA4	P32837	571 aa		5.18	□□□□□ -1.58
SED4	YCR067C	EAP1	P36041	632 aa	Known RBP	5.18	□□□□□ -1.58
SED4	YCR067C	YHL008C	P38750	627 aa		5.18	□□□□□ -1.58
SED4	YCR067C	PET100	P38958	111 aa		5.18	□□□□□ -1.58
SED4	YCR067C	VMA10	P48836	114 aa	Known RBP	5.18	□□□□□ -1.58
SED4	YCR067C	IMA2	Q08295	589 aa		5.18	□□□□□ -1.58
SED4	YCR067C	RRD2	Q12461	358 aa		5.18	□□□□□ -1.58
SED4	YCR067C	BI3	Q9ZZW7	517 aa		5.18	□□□□□ -1.58
SED4	YCR067C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
SED4	YCR067C	TUB1	P09733	447 aa	Known RBP	5.18	□□□□□ -1.58
SED4	YCR067C	SSC1	P0CS90	654 aa	Known RBP	5.18	□□□□□ -1.58
SED4	YCR067C	ITR2	P30606	609 aa		5.18	□□□□□ -1.58
SED4	YCR067C	TIF3	P34167	436 aa	Known RBP	5.18	□□□□□ -1.58
SED4	YCR067C	YKR078W	P36158	585 aa	Known RBP	5.18	□□□□□ -1.58
SED4	YCR067C	CCL1	P37366	393 aa		5.18	□□□□□ -1.58
SED4	YCR067C	ETR1	P38071	380 aa		5.18	□□□□□ -1.58
SED4	YCR067C	FTH1	P38310	465 aa		5.18	□□□□□ -1.58
SED4	YCR067C	YBR285W	P38354	144 aa		5.18	□□□□□ -1.58
SED4	YCR067C	UBP9	P39967	754 aa		5.18	□□□□□ -1.58
SED4	YCR067C	AIM21	P40563	679 aa		5.18	□□□□□ -1.58
SED4	YCR067C	LAM5	P43560	674 aa		5.18	□□□□□ -1.58
SED4	YCR067C	TAF1	P46677	1066 aa		5.18	□□□□□ -1.58
SED4	YCR067C	NOP9	P47077	666 aa	Known RBP	5.18	□□□□□ -1.58
SED4	YCR067C	SWP1	Q02795	286 aa		5.18	□□□□□ -1.58
SED4	YCR067C	TVP15	Q03860	143 aa		5.18	□□□□□ -1.58
SED4	YCR067C	YML082W	Q04533	649 aa	Known RBP	5.18	□□□□□ -1.58
SED4	YCR067C	VAM6	Q07468	1049 aa		5.18	□□□□□ -1.58
SED4	YCR067C	YPR202W	Q08993	238 aa		5.18	□□□□□ -1.58
SED4	YCR067C	YLR053C	Q12026	108 aa		5.18	□□□□□ -1.58
SED4	YCR067C	RCN2	Q12044	265 aa		5.18	□□□□□ -1.58
SED4	YCR067C	SAN1	P22470	610 aa		5.18	□□□□□ -1.58
SED4	YCR067C	CLB2	P24869	491 aa		5.18	□□□□□ -1.58
SED4	YCR067C	ABD1	P32783	436 aa	Predicted RBP	5.18	□□□□□ -1.58
SED4	YCR067C	YSC83	P32792	385 aa		5.18	□□□□□ -1.58
SED4	YCR067C	YKL023W	P36103	277 aa	Known RBP	5.18	□□□□□ -1.58
SED4	YCR067C	YHR112C	P38716	378 aa		5.18	□□□□□ -1.58
SED4	YCR067C	SAH1	P39954	449 aa	Known RBP	5.18	□□□□□ -1.58
SED4	YCR067C	ORC5	P50874	479 aa		5.18	□□□□□ -1.58
SED4	YCR067C	COG6	P53959	839 aa		5.18	□□□□□ -1.58
SED4	YCR067C	AIM33	Q04516	312 aa		5.18	□□□□□ -1.58
SED4	YCR067C	GGA1	Q06336	557 aa		5.18	□□□□□ -1.58
SED4	YCR067C	MPH2	P0CD99	609 aa		5.17	□□□□□ -1.58
SED4	YCR067C	PRE8	P23639	250 aa		5.17	□□□□□ -1.58
SED4	YCR067C	NPL6	P32832	435 aa		5.17	□□□□□ -1.58
SED4	YCR067C	YEL023C	P39992	682 aa		5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms