RNA–Protein interactions for RNA: YAL062W

GDH3, Transcript of NADP(+)-dependent glutamate dehydrogenase, yeast

Gene GDH3, Length 1,374 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDH3	YAL062W	TDA9	Q04545	1251 aa		10.96	□□□□□ -0.65
GDH3	YAL062W	IVY1	Q04934	453 aa		10.96	□□□□□ -0.65
GDH3	YAL062W	DIS3	Q08162	1001 aa	Known RBP	10.96	□□□□□ -0.65
GDH3	YAL062W	CDC8	P00572	216 aa		10.95	□□□□□ -0.66
GDH3	YAL062W	TRX1	P22217	103 aa	Known RBP	10.95	□□□□□ -0.66
GDH3	YAL062W	SEG2	P34250	1132 aa		10.95	□□□□□ -0.66
GDH3	YAL062W	YHR202W	P38887	602 aa		10.95	□□□□□ -0.66
GDH3	YAL062W	OPT1	P40897	799 aa		10.95	□□□□□ -0.66
GDH3	YAL062W	ASG7	P46993	209 aa		10.95	□□□□□ -0.66
GDH3	YAL062W	RIM8	P53179	542 aa		10.95	□□□□□ -0.66
GDH3	YAL062W	PIB1	Q06651	286 aa		10.95	□□□□□ -0.66
GDH3	YAL062W	AIM39	Q08223	395 aa		10.95	□□□□□ -0.66
GDH3	YAL062W	EMP46	Q12396	444 aa		10.95	□□□□□ -0.66
GDH3	YAL062W	TUB3	P09734	445 aa	Known RBP	10.94	□□□□□ -0.66
GDH3	YAL062W	NFU1	P32860	256 aa		10.94	□□□□□ -0.66
GDH3	YAL062W	ABZ1	P37254	787 aa	Predicted RBP	10.94	□□□□□ -0.66
GDH3	YAL062W	OLA1	P38219	394 aa	Known RBP	10.94	□□□□□ -0.66
GDH3	YAL062W	APM2	P38700	605 aa		10.94	□□□□□ -0.66
GDH3	YAL062W	END3	P39013	349 aa		10.94	□□□□□ -0.66
GDH3	YAL062W	INP52	P50942	1183 aa		10.94	□□□□□ -0.66
GDH3	YAL062W	UFO1	Q04511	668 aa		10.94	□□□□□ -0.66
GDH3	YAL062W	CIR2	Q08822	631 aa		10.94	□□□□□ -0.66
GDH3	YAL062W	APL5	Q08951	932 aa	Known RBP	10.94	□□□□□ -0.66
GDH3	YAL062W	RIO1	Q12196	484 aa	Known RBP	10.94	□□□□□ -0.66
GDH3	YAL062W	CIT2	P08679	460 aa		10.93	□□□□□ -0.66
GDH3	YAL062W	MSD1	P15179	658 aa	Known RBP	10.93	□□□□□ -0.66
GDH3	YAL062W	AEP2	P22136	580 aa		10.93	□□□□□ -0.66
GDH3	YAL062W	CAD1	P24813	409 aa	Known RBP	10.93	□□□□□ -0.66
GDH3	YAL062W	LRE1	P25579	583 aa	Known RBP	10.93	□□□□□ -0.66
GDH3	YAL062W	SWC5	P38326	303 aa		10.93	□□□□□ -0.66
GDH3	YAL062W	XDJ1	P39102	459 aa		10.93	□□□□□ -0.66
GDH3	YAL062W	YEL023C	P39992	682 aa		10.93	□□□□□ -0.66
GDH3	YAL062W	RPT2	P40327	437 aa	Known RBP	10.93	□□□□□ -0.66
GDH3	YAL062W	PFD1	P46988	109 aa		10.93	□□□□□ -0.66
GDH3	YAL062W	NOG2	P53742	486 aa	Known RBP	10.93	□□□□□ -0.66
GDH3	YAL062W	YNL108C	P53929	270 aa		10.93	□□□□□ -0.66
GDH3	YAL062W	UTP13	Q05946	817 aa	Known RBP	10.93	□□□□□ -0.66
GDH3	YAL062W	MDM38	Q08179	573 aa		10.93	□□□□□ -0.66
GDH3	YAL062W	YKL068W-A	Q3E826	78 aa		10.93	□□□□□ -0.66
GDH3	YAL062W	SEC1	P30619	724 aa	Known RBP	10.92	□□□□□ -0.66
GDH3	YAL062W	UBC6	P33296	250 aa	Predicted RBP	10.92	□□□□□ -0.66
GDH3	YAL062W	CCL1	P37366	393 aa		10.92	□□□□□ -0.66
GDH3	YAL062W	SLG1	P54867	378 aa		10.92	□□□□□ -0.66
GDH3	YAL062W	TAF9	Q05027	157 aa		10.92	□□□□□ -0.66
GDH3	YAL062W	APC5	Q08683	685 aa		10.92	□□□□□ -0.66
GDH3	YAL062W	VPS5	Q92331	675 aa		10.92	□□□□□ -0.66
GDH3	YAL062W	ADK2	P26364	225 aa		10.91	□□□□□ -0.66
GDH3	YAL062W	SRB2	P34162	210 aa		10.91	□□□□□ -0.66
GDH3	YAL062W	LAS1	P36146	502 aa	Predicted RBP	10.91	□□□□□ -0.66
GDH3	YAL062W	HMT1	P38074	348 aa		10.91	□□□□□ -0.66
GDH3	YAL062W	RPL22B	P56628	122 aa	Known RBP	10.91	□□□□□ -0.66
GDH3	YAL062W	KAP95	Q06142	861 aa	Known RBP	10.91	□□□□□ -0.66
GDH3	YAL062W	GPM2	Q12008	311 aa		10.91	□□□□□ -0.66
GDH3	YAL062W	TAF10	Q12030	206 aa		10.91	□□□□□ -0.66
GDH3	YAL062W	YRR1	Q12172	810 aa		10.91	□□□□□ -0.66
GDH3	YAL062W	TKL2	P33315	681 aa		10.9	□□□□□ -0.66
GDH3	YAL062W	YBR284W	P38150	797 aa		10.9	□□□□□ -0.66
GDH3	YAL062W	APN2	P38207	520 aa		10.9	□□□□□ -0.66
GDH3	YAL062W	PCA1	P38360	1216 aa		10.9	□□□□□ -0.66
GDH3	YAL062W	TIF5	P38431	405 aa	Known RBP	10.9	□□□□□ -0.66
GDH3	YAL062W	ERP2	P39704	215 aa		10.9	□□□□□ -0.66
GDH3	YAL062W	RAD26	P40352	1085 aa		10.9	□□□□□ -0.66
GDH3	YAL062W	YIL054W	P40524	105 aa		10.9	□□□□□ -0.66
GDH3	YAL062W	YNL247W	P53852	767 aa	Known RBP	10.9	□□□□□ -0.66
GDH3	YAL062W	YNL011C	P53980	444 aa		10.9	□□□□□ -0.66
GDH3	YAL062W	CDC55	Q00362	526 aa		10.9	□□□□□ -0.66
GDH3	YAL062W	THI7	Q05998	598 aa		10.9	□□□□□ -0.66
GDH3	YAL062W	GCD6	P32501	712 aa	Known RBP	10.9	□□□□□ -0.67
GDH3	YAL062W	VPH1	P32563	840 aa	Known RBP	10.9	□□□□□ -0.67
GDH3	YAL062W	RAD55	P38953	406 aa		10.9	□□□□□ -0.67
GDH3	YAL062W	LYS9	P38999	446 aa		10.9	□□□□□ -0.67
GDH3	YAL062W	ARG2	P40360	574 aa		10.9	□□□□□ -0.67
GDH3	YAL062W	TMA108	P40462	946 aa		10.9	□□□□□ -0.67
GDH3	YAL062W	MIC19	P43594	170 aa		10.9	□□□□□ -0.67
GDH3	YAL062W	YML6	P51998	286 aa		10.9	□□□□□ -0.67
GDH3	YAL062W	UTP6	Q02354	440 aa	Known RBP	10.9	□□□□□ -0.67
GDH3	YAL062W	YPL062W	Q02781	134 aa		10.9	□□□□□ -0.67
GDH3	YAL062W	RAD10	P06838	210 aa		10.89	□□□□□ -0.67
GDH3	YAL062W	YPK1	P12688	680 aa	Known RBP	10.89	□□□□□ -0.67
GDH3	YAL062W	PRP9	P19736	530 aa	Known RBP	10.89	□□□□□ -0.67
GDH3	YAL062W	MUD2	P36084	527 aa	Known RBP	10.89	□□□□□ -0.67
GDH3	YAL062W	MSG5	P38590	489 aa		10.89	□□□□□ -0.67
GDH3	YAL062W	YMR134W	P40207	237 aa		10.89	□□□□□ -0.67
GDH3	YAL062W	TGL3	P40308	642 aa		10.89	□□□□□ -0.67
GDH3	YAL062W	KHA1	P40309	873 aa		10.89	□□□□□ -0.67
GDH3	YAL062W	MVP1	P40959	511 aa	Known RBP	10.89	□□□□□ -0.67
GDH3	YAL062W	YNL320W	P42840	284 aa		10.89	□□□□□ -0.67
GDH3	YAL062W	NMD5	P46970	1048 aa		10.89	□□□□□ -0.67
GDH3	YAL062W	YNL040W	P53960	456 aa	Predicted RBP	10.89	□□□□□ -0.67
GDH3	YAL062W	SPP1	Q03012	353 aa		10.89	□□□□□ -0.67
GDH3	YAL062W	RCL1	Q08096	367 aa	Predicted RBP	10.89	□□□□□ -0.67
GDH3	YAL062W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	10.89	□□□□□ -0.67	not detected
GDH3	YAL062W	YDR018C	Q12185	396 aa		10.89	□□□□□ -0.67
GDH3	YAL062W	KGD2	P19262	463 aa	Predicted RBP	10.88	□□□□□ -0.67
GDH3	YAL062W	MET4	P32389	672 aa		10.88	□□□□□ -0.67
GDH3	YAL062W	PEP7	P32609	515 aa		10.88	□□□□□ -0.67
GDH3	YAL062W	RFS1	P38234	210 aa	Known RBP	10.88	□□□□□ -0.67
GDH3	YAL062W	ECM2	P38241	364 aa	Known RBP	10.88	□□□□□ -0.67
GDH3	YAL062W	SPP381	P38282	291 aa	Predicted RBP	10.88	□□□□□ -0.67
GDH3	YAL062W	JHD1	P40034	492 aa		10.88	□□□□□ -0.67

Retrieved 100 of 5,963 RNA–protein pairs in 70 ms