RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W PYC1P11154 1178 aaKnown RBP2.96□□□□□ -1.93
BRO1YPL084W KAR1P11927 433 aa2.96□□□□□ -1.93
BRO1YPL084W YKU70P32807 602 aa2.96□□□□□ -1.93
BRO1YPL084W ECM1P39715 212 aa2.96□□□□□ -1.93
BRO1YPL084W GID8P40208 455 aa2.96□□□□□ -1.93
BRO1YPL084W MCM21Q06675 368 aa2.96□□□□□ -1.93
BRO1YPL084W APM4Q99186 491 aa2.96□□□□□ -1.93
BRO1YPL084W COX11P19516 300 aaKnown RBP2.96□□□□□ -1.94
BRO1YPL084W HCA4P20448 770 aaKnown RBP2.96□□□□□ -1.94
BRO1YPL084W RNR1P21524 888 aaKnown RBP2.96□□□□□ -1.94
BRO1YPL084W ERG6P25087 383 aaKnown RBP2.96□□□□□ -1.94
BRO1YPL084W TRZ1P36159 838 aaPredicted RBP2.96□□□□□ -1.94
BRO1YPL084W SLD3P53135 668 aa2.96□□□□□ -1.94
BRO1YPL084W TGL2P54857 326 aa2.96□□□□□ -1.94
BRO1YPL084W DLT1Q04216 342 aa2.96□□□□□ -1.94
BRO1YPL084W YPS7Q06325 596 aa2.96□□□□□ -1.94
BRO1YPL084W SLX4Q12098 748 aa2.96□□□□□ -1.94
BRO1YPL084W PMA1P05030 918 aaKnown RBP2.95□□□□□ -1.94
BRO1YPL084W CAF20P12962 161 aaKnown RBP2.95□□□□□ -1.94
BRO1YPL084W ATP12P22135 325 aa2.95□□□□□ -1.94
BRO1YPL084W HCM1P25364 564 aa2.95□□□□□ -1.94
BRO1YPL084W HEM12P32347 362 aaPredicted RBP2.95□□□□□ -1.94
BRO1YPL084W SHM2P37291 469 aaKnown RBP2.95□□□□□ -1.94
BRO1YPL084W DUN1P39009 513 aa2.95□□□□□ -1.94
BRO1YPL084W ATG36P46983 293 aa2.95□□□□□ -1.94
BRO1YPL084W RNR4P49723 345 aaKnown RBP2.95□□□□□ -1.94
BRO1YPL084W MUP1P50276 574 aa2.95□□□□□ -1.94
BRO1YPL084W YNL034WP53963 612 aa2.95□□□□□ -1.94
BRO1YPL084W YNL018CP53976 612 aa2.95□□□□□ -1.94
BRO1YPL084W CTK1Q03957 528 aaKnown RBP2.95□□□□□ -1.94
BRO1YPL084W ECM38Q05902 660 aaPredicted RBP2.95□□□□□ -1.94
BRO1YPL084W SGO1Q08490 590 aa2.95□□□□□ -1.94
BRO1YPL084W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
BRO1YPL084W MPD2Q99316 277 aa2.95□□□□□ -1.94
BRO1YPL084W RPS17AP02407 136 aaKnown RBP2.95□□□□□ -1.94
BRO1YPL084W RPS17BP14127 136 aaKnown RBP2.95□□□□□ -1.94
BRO1YPL084W VID28P40547 921 aa2.95□□□□□ -1.94
BRO1YPL084W BUL1P48524 976 aa2.95□□□□□ -1.94
BRO1YPL084W AMA1P50082 593 aa2.95□□□□□ -1.94
BRO1YPL084W MTL1P53214 551 aa2.95□□□□□ -1.94
BRO1YPL084W PHM6Q05637 104 aa2.95□□□□□ -1.94
BRO1YPL084W ECM3Q99252 613 aa2.95□□□□□ -1.94
BRO1YPL084W HRP1Q99383 534 aaKnown RBP2.95□□□□□ -1.94
BRO1YPL084W MET3P08536 511 aa2.94□□□□□ -1.94
BRO1YPL084W LAT1P12695 482 aaKnown RBP2.94□□□□□ -1.94
BRO1YPL084W FRS1P15624 595 aaKnown RBP2.94□□□□□ -1.94
BRO1YPL084W CTS1P29029 562 aa2.94□□□□□ -1.94
BRO1YPL084W PET127P32606 800 aa2.94□□□□□ -1.94
BRO1YPL084W EMP65P40085 556 aa2.94□□□□□ -1.94
BRO1YPL084W ELO3P40319 345 aa2.94□□□□□ -1.94
BRO1YPL084W YIR042CP40586 236 aa2.94□□□□□ -1.94
BRO1YPL084W RCR2Q03446 210 aaKnown RBP2.94□□□□□ -1.94
BRO1YPL084W VPS36Q06696 566 aa2.94□□□□□ -1.94
BRO1YPL084W AIM39Q08223 395 aa2.94□□□□□ -1.94
BRO1YPL084W TRM13Q12383 476 aa2.94□□□□□ -1.94
BRO1YPL084W CDC26P14724 124 aa2.94□□□□□ -1.94
BRO1YPL084W PEA2P40091 420 aa2.94□□□□□ -1.94
BRO1YPL084W DAS1P47005 663 aa2.94□□□□□ -1.94
BRO1YPL084W NOP9P47077 666 aaKnown RBP2.94□□□□□ -1.94
BRO1YPL084W RTS3P53289 263 aa2.94□□□□□ -1.94
BRO1YPL084W HMO1Q03973 246 aaKnown RBP2.94□□□□□ -1.94
BRO1YPL084W NTO1Q12311 748 aa2.94□□□□□ -1.94
BRO1YPL084W ERG4P25340 473 aa2.93□□□□□ -1.94
BRO1YPL084W HRR25P29295 494 aaKnown RBP2.93□□□□□ -1.94
BRO1YPL084W EFT1P32324 842 aaKnown RBP2.93□□□□□ -1.94
BRO1YPL084W YBR053CP38235 358 aa2.93□□□□□ -1.94
BRO1YPL084W LYS9P38999 446 aa2.93□□□□□ -1.94
BRO1YPL084W GET2P40056 285 aa2.93□□□□□ -1.94
BRO1YPL084W HOS4P40480 1083 aa2.93□□□□□ -1.94
BRO1YPL084W IES1P43579 692 aa2.93□□□□□ -1.94
BRO1YPL084W RSC8P43609 557 aaKnown RBP2.93□□□□□ -1.94
BRO1YPL084W STP4Q07351 490 aa2.93□□□□□ -1.94
BRO1YPL084W DIA2Q08496 732 aaPredicted RBP2.93□□□□□ -1.94
BRO1YPL084W ATG11Q12527 1178 aa2.93□□□□□ -1.94
BRO1YPL084W ERG20P08524 352 aaKnown RBP2.93□□□□□ -1.94
BRO1YPL084W DGR2P32330 852 aa2.93□□□□□ -1.94
BRO1YPL084W HIR1P32479 840 aa2.93□□□□□ -1.94
BRO1YPL084W IRC24P40580 263 aa2.93□□□□□ -1.94
BRO1YPL084W BAP3P41815 604 aa2.93□□□□□ -1.94
BRO1YPL084W TAF1P46677 1066 aa2.93□□□□□ -1.94
BRO1YPL084W VBA4Q04602 768 aaKnown RBP2.93□□□□□ -1.94
BRO1YPL084W ESC8Q08119 714 aa2.93□□□□□ -1.94
BRO1YPL084W NGL1Q08213 363 aaKnown RBP2.93□□□□□ -1.94
BRO1YPL084W PEX15Q08215 383 aa2.93□□□□□ -1.94
BRO1YPL084W NYV1Q12255 253 aa2.93□□□□□ -1.94
BRO1YPL084W IME1P21190 360 aa2.92□□□□□ -1.94
BRO1YPL084W SEC6P32844 805 aa2.92□□□□□ -1.94
BRO1YPL084W DEF1P35732 738 aaKnown RBP2.92□□□□□ -1.94
BRO1YPL084W SUL1P38359 859 aa2.92□□□□□ -1.94
BRO1YPL084W FMO1P38866 432 aa2.92□□□□□ -1.94
BRO1YPL084W PXA1P41909 870 aa2.92□□□□□ -1.94
BRO1YPL084W RGC1Q06108 1083 aaKnown RBP2.92□□□□□ -1.94
BRO1YPL084W IRC13Q08630 104 aa2.92□□□□□ -1.94
BRO1YPL084W YOR378WQ08902 515 aa2.92□□□□□ -1.94
BRO1YPL084W FRE5Q08908 694 aa2.92□□□□□ -1.94
BRO1YPL084W CWC2Q12046 339 aaPredicted RBP2.92□□□□□ -1.94
BRO1YPL084W SST2P11972 698 aaKnown RBP2.92□□□□□ -1.94
BRO1YPL084W HXT4P32467 576 aa2.92□□□□□ -1.94
BRO1YPL084W HIS7P33734 552 aaKnown RBP2.92□□□□□ -1.94
BRO1YPL084W NIC96P34077 839 aa2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms