RNA–Protein interactions for RNA: YPL006W

NCR1, Transcript of Vacuolar membrane protein, yeast

Gene NCR1, Length 3,513 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCR1	YPL006W	TMN3	P40071	706 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	MKT1	P40850	830 aa	Known RBP	4.13	□□□□□ -1.75
NCR1	YPL006W	ZAP1	P47043	880 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	HSH155	P49955	971 aa	Known RBP	4.13	□□□□□ -1.75
NCR1	YPL006W	ARI1	P53111	347 aa	Known RBP	4.13	□□□□□ -1.75
NCR1	YPL006W	YNL144C	P53907	740 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	COG6	P53959	839 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	UBX4	P54730	416 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	UBP2	Q01476	1272 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	ATP25	Q03153	612 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	TRE1	Q08919	783 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	GIS3	Q12418	502 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	OCA6	Q12454	224 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	TRM11	Q12463	433 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	CTT1	P06115	562 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	SAM1	P10659	382 aa	Known RBP	4.13	□□□□□ -1.75
NCR1	YPL006W	CLB4	P24871	460 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	SPS22	P25380	463 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	ABD1	P32783	436 aa	Predicted RBP	4.13	□□□□□ -1.75
NCR1	YPL006W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
NCR1	YPL006W	PPX1	P38698	397 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	LIA1	P47120	325 aa	Known RBP	4.13	□□□□□ -1.75
NCR1	YPL006W	YML037C	Q03703	340 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	IWR1	Q07532	353 aa	Predicted RBP	4.13	□□□□□ -1.75
NCR1	YPL006W	ILS1	P09436	1072 aa	Known RBP	4.13	□□□□□ -1.75
NCR1	YPL006W	ALG5	P40350	334 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	AIM21	P40563	679 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	YML6	P51998	286 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	NOP15	P53927	220 aa	Predicted RBP	4.13	□□□□□ -1.75
NCR1	YPL006W	OSH6	Q02201	448 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	SPO19	Q03029	223 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	GTB1	Q04924	702 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	IVY1	Q04934	453 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	ECM3	Q99252	613 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	CDC24	P11433	854 aa	Predicted RBP	4.12	□□□□□ -1.75
NCR1	YPL006W	VMA1	P17255	1071 aa	Known RBP	4.12	□□□□□ -1.75
NCR1	YPL006W	GAP1	P19145	602 aa	Predicted RBP	4.12	□□□□□ -1.75
NCR1	YPL006W	KAR4	P25583	335 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	SIN4	P32259	974 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	SSE1	P32589	693 aa	Known RBP	4.12	□□□□□ -1.75
NCR1	YPL006W	TFC3	P34111	1160 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	UBP14	P38237	781 aa	Known RBP	4.12	□□□□□ -1.75
NCR1	YPL006W	MSR1	P38714	643 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	SMF2	P38778	549 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	LIN1	P38852	340 aa	Predicted RBP	4.12	□□□□□ -1.75
NCR1	YPL006W	PRK1	P40494	810 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	ALY2	P47029	1046 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	PAN2	P53010	1115 aa	Predicted RBP	4.12	□□□□□ -1.75
NCR1	YPL006W	LGE1	Q02796	332 aa	Known RBP	4.12	□□□□□ -1.75
NCR1	YPL006W	DUS3	Q06053	668 aa	Known RBP	4.12	□□□□□ -1.75
NCR1	YPL006W	CDC73	Q06697	393 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
NCR1	YPL006W	IES4	Q08561	116 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	DPH5	P32469	300 aa	Predicted RBP	4.12	□□□□□ -1.75
NCR1	YPL006W	ZUO1	P32527	433 aa	Known RBP	4.12	□□□□□ -1.75
NCR1	YPL006W	SHP1	P34223	423 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	ACA1	P39970	489 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	ARG2	P40360	574 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	TMA108	P40462	946 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	ORC5	P50874	479 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	DRN1	P53255	507 aa	Known RBP	4.12	□□□□□ -1.75
NCR1	YPL006W	RTT102	P53330	157 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	DAK1	P54838	584 aa	Known RBP	4.12	□□□□□ -1.75
NCR1	YPL006W	BET4	Q00618	327 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	TBF1	Q02457	562 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	BUD22	Q04347	519 aa	Known RBP	4.12	□□□□□ -1.75
NCR1	YPL006W	ISA1	Q07821	250 aa	Predicted RBP	4.12	□□□□□ -1.75
NCR1	YPL006W	SSC1	P0CS90	654 aa	Known RBP	4.12	□□□□□ -1.75
NCR1	YPL006W	SNA3	P14359	133 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
NCR1	YPL006W	MRM1	P25270	412 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	CDC20	P26309	610 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	CBF2	P32504	956 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	MRE11	P32829	692 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	COY1	P34237	679 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	ATG19	P35193	415 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	MCR1	P36060	302 aa	Known RBP	4.12	□□□□□ -1.75
NCR1	YPL006W	NIT1	P40447	199 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	INP52	P50942	1183 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	USE1	P53146	245 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	TRM44	Q02648	567 aa	Known RBP	4.12	□□□□□ -1.75
NCR1	YPL006W	PRM6	Q04705	352 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	COQ9	Q05779	260 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	KAP95	Q06142	861 aa	Known RBP	4.12	□□□□□ -1.75
NCR1	YPL006W	NOC3	Q07896	663 aa	Predicted RBP	4.12	□□□□□ -1.75
NCR1	YPL006W	GPM3	Q12326	303 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	AVL9	Q12500	764 aa		4.12	□□□□□ -1.75
NCR1	YPL006W	NOT5	Q12514	560 aa	Predicted RBP	4.12	□□□□□ -1.75
NCR1	YPL006W	DED1	P06634	604 aa	Known RBP	4.11	□□□□□ -1.75
NCR1	YPL006W	PDR1	P12383	1068 aa		4.11	□□□□□ -1.75
NCR1	YPL006W	EXO70	P19658	623 aa		4.11	□□□□□ -1.75
NCR1	YPL006W	IRE1	P32361	1115 aa		4.11	□□□□□ -1.75
NCR1	YPL006W	SEG2	P34250	1132 aa		4.11	□□□□□ -1.75
NCR1	YPL006W	APM2	P38700	605 aa		4.11	□□□□□ -1.75
NCR1	YPL006W	JEM1	P40358	645 aa		4.11	□□□□□ -1.75
NCR1	YPL006W	GVP36	P40531	326 aa	Known RBP	4.11	□□□□□ -1.75
NCR1	YPL006W	ASN1	P49089	572 aa	Known RBP	4.11	□□□□□ -1.75
NCR1	YPL006W	SLT2	Q00772	484 aa		4.11	□□□□□ -1.75
NCR1	YPL006W	ADE13	Q05911	482 aa	Known RBP	4.11	□□□□□ -1.75
NCR1	YPL006W	SUB2	Q07478	446 aa	Known RBP	4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms