RNA–Protein interactions for RNA: YNL086W

SNN1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene SNN1, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNN1YNL086W TPM2P40414 161 aa6.79□□□□□ -1.32
SNN1YNL086W GCV1P48015 400 aa6.79□□□□□ -1.32
SNN1YNL086W GCV2P49095 1034 aa6.79□□□□□ -1.32
SNN1YNL086W SOK2P53438 785 aaPredicted RBP6.79□□□□□ -1.32
SNN1YNL086W YLR257WQ06146 321 aaKnown RBP6.79□□□□□ -1.32
SNN1YNL086W BRE1Q07457 700 aaKnown RBP6.79□□□□□ -1.32
SNN1YNL086W CLF1Q12309 687 aaPredicted RBP6.79□□□□□ -1.32
SNN1YNL086W SNF1P06782 633 aaKnown RBP6.78□□□□□ -1.32
SNN1YNL086W RPL8AP17076 256 aaKnown RBP6.78□□□□□ -1.32
SNN1YNL086W OPI1P21957 404 aa6.78□□□□□ -1.32
SNN1YNL086W YKL097CP34245 136 aa6.78□□□□□ -1.32
SNN1YNL086W CRP1P38845 465 aaKnown RBP6.78□□□□□ -1.32
SNN1YNL086W MBP1P39678 833 aa6.78□□□□□ -1.32
SNN1YNL086W YEL025CP39991 1188 aa6.78□□□□□ -1.32
SNN1YNL086W HMF1P40037 129 aaKnown RBP6.78□□□□□ -1.32
SNN1YNL086W MOB1P40484 314 aa6.78□□□□□ -1.32
SNN1YNL086W YIR016WP40572 265 aa6.78□□□□□ -1.32
SNN1YNL086W LYS5P50113 272 aa6.78□□□□□ -1.32
SNN1YNL086W RTA1P53047 317 aa6.78□□□□□ -1.32
SNN1YNL086W TPO2P53283 614 aa6.78□□□□□ -1.32
SNN1YNL086W RTS3P53289 263 aa6.78□□□□□ -1.32
SNN1YNL086W YNR063WP53749 607 aa6.78□□□□□ -1.32
SNN1YNL086W MDM1Q01846 1127 aa6.78□□□□□ -1.32
SNN1YNL086W MUK1Q02866 612 aa6.78□□□□□ -1.32
SNN1YNL086W ECM16Q04217 1267 aaKnown RBP6.78□□□□□ -1.32
SNN1YNL086W VIP1Q06685 1146 aaKnown RBP6.78□□□□□ -1.32
SNN1YNL086W YPL066WQ12194 479 aa6.78□□□□□ -1.32
SNN1YNL086W UBC1P21734 215 aaKnown RBP6.77□□□□□ -1.33
SNN1YNL086W PEX1P24004 1043 aa6.77□□□□□ -1.33
SNN1YNL086W SFP1P32432 683 aa6.77□□□□□ -1.33
SNN1YNL086W CDC11P32458 415 aa6.77□□□□□ -1.33
SNN1YNL086W RFS1P38234 210 aaKnown RBP6.77□□□□□ -1.33
SNN1YNL086W RGD1P38339 666 aa6.77□□□□□ -1.33
SNN1YNL086W REI1P38344 393 aaPredicted RBP6.77□□□□□ -1.33
SNN1YNL086W CEM1P39525 442 aa6.77□□□□□ -1.33
SNN1YNL086W GEM1P39722 662 aa6.77□□□□□ -1.33
SNN1YNL086W MPH1P40562 993 aa6.77□□□□□ -1.33
SNN1YNL086W YFL052WP43551 465 aa6.77□□□□□ -1.33
SNN1YNL086W NTG2Q08214 380 aa6.77□□□□□ -1.33
SNN1YNL086W YLL054CQ12244 843 aa6.77□□□□□ -1.33
SNN1YNL086W MAK31P23059 88 aa6.76□□□□□ -1.33
SNN1YNL086W CDC48P25694 835 aaKnown RBP6.76□□□□□ -1.33
SNN1YNL086W SEG2P34250 1132 aa6.76□□□□□ -1.33
SNN1YNL086W ALG3P38179 458 aa6.76□□□□□ -1.33
SNN1YNL086W ARP1P38696 384 aa6.76□□□□□ -1.33
SNN1YNL086W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33 RIP-Chip
SNN1YNL086W UGO1Q03327 502 aa6.76□□□□□ -1.33
SNN1YNL086W MYO5Q04439 1219 aaKnown RBP6.76□□□□□ -1.33
SNN1YNL086W GNT1Q12096 491 aa6.76□□□□□ -1.33
SNN1YNL086W RRD2Q12461 358 aa6.76□□□□□ -1.33
SNN1YNL086W SEC21P32074 935 aaKnown RBP6.75□□□□□ -1.33
SNN1YNL086W BET3P36149 193 aa6.75□□□□□ -1.33
SNN1YNL086W SUL1P38359 859 aa6.75□□□□□ -1.33
SNN1YNL086W HSE1P38753 452 aa6.75□□□□□ -1.33
SNN1YNL086W PAN5P38787 379 aa6.75□□□□□ -1.33
SNN1YNL086W GIP2P40036 548 aa6.75□□□□□ -1.33
SNN1YNL086W ESL1P40456 1118 aa6.75□□□□□ -1.33
SNN1YNL086W HSV2P50079 448 aaPredicted RBP6.75□□□□□ -1.33
SNN1YNL086W MDR1P53258 950 aa6.75□□□□□ -1.33
SNN1YNL086W SYT1Q06836 1226 aa6.75□□□□□ -1.33
SNN1YNL086W SLP1Q12232 587 aa6.75□□□□□ -1.33
SNN1YNL086W PTC5Q12511 572 aa6.75□□□□□ -1.33
SNN1YNL086W APE1P14904 514 aa6.74□□□□□ -1.33
SNN1YNL086W MLS1P30952 554 aa6.74□□□□□ -1.33
SNN1YNL086W COY1P34237 679 aa6.74□□□□□ -1.33
SNN1YNL086W YAR028WP39548 234 aa6.74□□□□□ -1.33
SNN1YNL086W YEN1P40028 759 aa6.74□□□□□ -1.33
SNN1YNL086W MMF1P40185 145 aaKnown RBP6.74□□□□□ -1.33
SNN1YNL086W MAF1P41910 395 aa6.74□□□□□ -1.33
SNN1YNL086W ALT2P52892 507 aa6.74□□□□□ -1.33
SNN1YNL086W YNL134CP53912 376 aaKnown RBP6.74□□□□□ -1.33
SNN1YNL086W MFB1Q04922 465 aa6.74□□□□□ -1.33
SNN1YNL086W CRD1Q07560 283 aa6.74□□□□□ -1.33
SNN1YNL086W AVO1Q08236 1176 aa6.74□□□□□ -1.33
SNN1YNL086W ARP6Q12509 438 aa6.74□□□□□ -1.33
SNN1YNL086W RME1P32338 300 aaKnown RBP6.73□□□□□ -1.33
SNN1YNL086W GCS1P35197 352 aa6.73□□□□□ -1.33
SNN1YNL086W MRPL7P36519 292 aa6.73□□□□□ -1.33
SNN1YNL086W GDH3P39708 457 aa6.73□□□□□ -1.33
SNN1YNL086W YJL045WP47052 634 aa6.73□□□□□ -1.33
SNN1YNL086W ASE1P50275 885 aa6.73□□□□□ -1.33
SNN1YNL086W LCB5Q06147 687 aaKnown RBP6.73□□□□□ -1.33
SNN1YNL086W TFC6Q06339 672 aa6.73□□□□□ -1.33
SNN1YNL086W SPP382Q06411 708 aaPredicted RBP6.73□□□□□ -1.33
SNN1YNL086W SPN1Q06505 410 aaPredicted RBP6.73□□□□□ -1.33
SNN1YNL086W GIC2Q06648 383 aa6.73□□□□□ -1.33
SNN1YNL086W WHI4Q07655 649 aaKnown RBP6.73□□□□□ -1.33
SNN1YNL086W DSE3Q08729 430 aa6.73□□□□□ -1.33
SNN1YNL086W HBN1Q96VH4 193 aa6.73□□□□□ -1.33
SNN1YNL086W SAC7P17121 654 aa6.72□□□□□ -1.33
SNN1YNL086W HCM1P25364 564 aa6.72□□□□□ -1.33
SNN1YNL086W CSE2P33308 149 aa6.72□□□□□ -1.33
SNN1YNL086W PEX6P33760 1030 aa6.72□□□□□ -1.33
SNN1YNL086W SKI2P35207 1287 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
SNN1YNL086W ATG36P46983 293 aa6.72□□□□□ -1.33
SNN1YNL086W YRB30P53107 440 aaPredicted RBP6.72□□□□□ -1.33
SNN1YNL086W YOR111WQ99210 232 aa6.72□□□□□ -1.33
SNN1YNL086W TOM70P07213 617 aaKnown RBP6.71□□□□□ -1.34
SNN1YNL086W IMP2'P32351 346 aa6.71□□□□□ -1.34
SNN1YNL086W HBS1P32769 611 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms