RNA–Protein interactions for RNA: YLR381W

CTF3, Transcript of Outer kinetochore protein that forms a complex with Mcm16p and Mcm22p, yeastyeast

Gene CTF3, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF3YLR381W INA17Q02888 182 aa7.71□□□□□ -1.17
CTF3YLR381W NOG1Q02892 647 aaKnown RBP7.71□□□□□ -1.17
CTF3YLR381W ABZ2Q03266 374 aa7.71□□□□□ -1.17
CTF3YLR381W SHE9Q04172 456 aa7.71□□□□□ -1.17
CTF3YLR381W VHS3Q08438 674 aa7.71□□□□□ -1.17
CTF3YLR381W MDM20Q12387 796 aaKnown RBP7.71□□□□□ -1.17
CTF3YLR381W PGI1P12709 554 aaKnown RBP7.71□□□□□ -1.18
CTF3YLR381W YAK1P14680 807 aa7.71□□□□□ -1.18
CTF3YLR381W ILV6P25605 309 aaKnown RBP7.71□□□□□ -1.18
CTF3YLR381W PEP3P27801 918 aa7.71□□□□□ -1.18
CTF3YLR381W MCM4P30665 933 aaKnown RBP7.71□□□□□ -1.18
CTF3YLR381W EUG1P32474 517 aa7.71□□□□□ -1.18
CTF3YLR381W XRS2P33301 854 aa7.71□□□□□ -1.18
CTF3YLR381W GLG1P36143 616 aa7.71□□□□□ -1.18
CTF3YLR381W YKR078WP36158 585 aaKnown RBP7.71□□□□□ -1.18
CTF3YLR381W RRF1P38771 230 aa7.71□□□□□ -1.18
CTF3YLR381W IES1P43579 692 aa7.71□□□□□ -1.18
CTF3YLR381W GPI8P49018 411 aa7.71□□□□□ -1.18
CTF3YLR381W CNM67P53865 581 aaKnown RBP7.71□□□□□ -1.18
CTF3YLR381W PRO2P54885 456 aaKnown RBP7.71□□□□□ -1.18
CTF3YLR381W MTC5Q03897 1148 aa7.71□□□□□ -1.18
CTF3YLR381W GLO2Q05584 274 aa7.71□□□□□ -1.18
CTF3YLR381W NEW1Q08972 1196 aaKnown RBP7.71□□□□□ -1.18
CTF3YLR381W BAG7Q12128 409 aa7.71□□□□□ -1.18
CTF3YLR381W IPP1P00817 287 aaKnown RBP7.7□□□□□ -1.18
CTF3YLR381W PMS1P14242 873 aa7.7□□□□□ -1.18
CTF3YLR381W STF2P16965 84 aa7.7□□□□□ -1.18
CTF3YLR381W VPS3P23643 1011 aa7.7□□□□□ -1.18
CTF3YLR381W LCB1P25045 558 aaKnown RBP7.7□□□□□ -1.18
CTF3YLR381W RPC53P25441 422 aa7.7□□□□□ -1.18
CTF3YLR381W PES4P39684 611 aa7.7□□□□□ -1.18
CTF3YLR381W GEM1P39722 662 aa7.7□□□□□ -1.18
CTF3YLR381W ZRG8P40021 1076 aa7.7□□□□□ -1.18
CTF3YLR381W HGH1P48362 394 aaKnown RBP7.7□□□□□ -1.18
CTF3YLR381W STB4P50104 949 aa7.7□□□□□ -1.18
CTF3YLR381W YNL040WP53960 456 aaPredicted RBP7.7□□□□□ -1.18
CTF3YLR381W NCR1Q12200 1170 aa7.7□□□□□ -1.18
CTF3YLR381W MST1P07236 462 aa7.7□□□□□ -1.18
CTF3YLR381W MPH2P0CD99 609 aa7.7□□□□□ -1.18
CTF3YLR381W SHM1P37292 490 aaPredicted RBP7.7□□□□□ -1.18
CTF3YLR381W RCK2P38623 610 aa7.7□□□□□ -1.18
CTF3YLR381W SMX2P40204 77 aaKnown RBP7.7□□□□□ -1.18
CTF3YLR381W MNT3P40549 630 aa7.7□□□□□ -1.18
CTF3YLR381W ISM1P48526 1002 aa7.7□□□□□ -1.18
CTF3YLR381W ADE16P54113 591 aaKnown RBP7.7□□□□□ -1.18
CTF3YLR381W ORC4P54791 529 aa7.7□□□□□ -1.18
CTF3YLR381W AAD16Q02895 342 aa7.7□□□□□ -1.18
CTF3YLR381W YDL109CQ12103 647 aa7.7□□□□□ -1.18
CTF3YLR381W TY1B-JR2P47100 1755 aaKnown RBP7.69□□□□□ -1.18
CTF3YLR381W TY1B-ER2Q03619 1755 aa7.69□□□□□ -1.18
CTF3YLR381W TY1B-MR1Q04214 1755 aa7.69□□□□□ -1.18
CTF3YLR381W TY1B-MR2Q04670 1755 aaKnown RBP7.69□□□□□ -1.18
CTF3YLR381W TY1B-LR1Q12088 1755 aaKnown RBP7.69□□□□□ -1.18
CTF3YLR381W TY1B-NL1Q12112 1755 aa7.69□□□□□ -1.18
CTF3YLR381W TY1B-GR1Q12141 1755 aa7.69□□□□□ -1.18
CTF3YLR381W TY1B-BLQ12490 1755 aa7.69□□□□□ -1.18
CTF3YLR381W SRV2P17555 526 aaKnown RBP7.69□□□□□ -1.18
CTF3YLR381W PMA2P19657 947 aa7.69□□□□□ -1.18
CTF3YLR381W HSP60P19882 572 aaKnown RBP7.69□□□□□ -1.18
CTF3YLR381W ISY1P21374 235 aaPredicted RBP7.69□□□□□ -1.18
CTF3YLR381W SWI4P25302 1093 aaKnown RBP7.69□□□□□ -1.18
CTF3YLR381W POL4P25615 582 aa7.69□□□□□ -1.18
CTF3YLR381W NAM7P30771 971 aaKnown RBP7.69□□□□□ -1.18
CTF3YLR381W ACH1P32316 526 aa7.69□□□□□ -1.18
CTF3YLR381W MRPL17P36528 281 aa7.69□□□□□ -1.18
CTF3YLR381W YHR112CP38716 378 aa7.69□□□□□ -1.18
CTF3YLR381W MTG2P38860 518 aa7.69□□□□□ -1.18
CTF3YLR381W JLP2P40206 208 aa7.69□□□□□ -1.18
CTF3YLR381W TRF5P48561 642 aaKnown RBP7.69□□□□□ -1.18
CTF3YLR381W VMA10P48836 114 aaKnown RBP7.69□□□□□ -1.18
CTF3YLR381W ZIP2P53061 704 aa7.69□□□□□ -1.18
CTF3YLR381W COG2P53271 262 aa7.69□□□□□ -1.18
CTF3YLR381W FDC1Q03034 503 aa7.69□□□□□ -1.18
CTF3YLR381W VIP1Q06685 1146 aaKnown RBP7.69□□□□□ -1.18
CTF3YLR381W VPS54Q12071 889 aa7.69□□□□□ -1.18
CTF3YLR381W SNU23Q12368 194 aaPredicted RBP7.69□□□□□ -1.18
CTF3YLR381W MSD1P15179 658 aaKnown RBP7.68□□□□□ -1.18
CTF3YLR381W DBP3P20447 523 aaKnown RBP7.68□□□□□ -1.18
CTF3YLR381W DBF2P22204 572 aa7.68□□□□□ -1.18
CTF3YLR381W APN1P22936 367 aa7.68□□□□□ -1.18
CTF3YLR381W AFR1P33304 620 aa7.68□□□□□ -1.18
CTF3YLR381W NTH2P35172 780 aa7.68□□□□□ -1.18
CTF3YLR381W SWC5P38326 303 aa7.68□□□□□ -1.18
CTF3YLR381W MDE1P47095 244 aa7.68□□□□□ -1.18
CTF3YLR381W PEF1P53238 335 aa7.68□□□□□ -1.18
CTF3YLR381W BSC5P53755 489 aa7.68□□□□□ -1.18
CTF3YLR381W MNL2Q12205 849 aa7.68□□□□□ -1.18
CTF3YLR381W SIR3P06701 978 aa7.68□□□□□ -1.18
CTF3YLR381W RPS6AP0CX37 236 aaKnown RBP7.68□□□□□ -1.18
CTF3YLR381W RPS6BP0CX38 236 aaPredicted RBP7.68□□□□□ -1.18
CTF3YLR381W SPO12P17123 173 aa7.68□□□□□ -1.18
CTF3YLR381W SPO11P23179 398 aa7.68□□□□□ -1.18
CTF3YLR381W URE2P23202 354 aaKnown RBP7.68□□□□□ -1.18
CTF3YLR381W RPS5P26783 225 aaKnown RBP7.68□□□□□ -1.18
CTF3YLR381W MLS1P30952 554 aa7.68□□□□□ -1.18
CTF3YLR381W YHI9P38765 294 aa7.68□□□□□ -1.18
CTF3YLR381W CTM1P38818 585 aa7.68□□□□□ -1.18
CTF3YLR381W RCY1P39531 840 aa7.68□□□□□ -1.18
CTF3YLR381W PCI8P40512 444 aa7.68□□□□□ -1.18
CTF3YLR381W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.68□□□□□ -1.18not detected
Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms