RNA–Protein interactions for RNA: YLR250W

SSP120, Transcript of Protein of unknown function, yeastyeast

Gene SSP120, Length 705 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSP120YLR250W SMC3P47037 1230 aa6.08□□□□□ -1.44
SSP120YLR250W VPS70P47161 811 aa6.08□□□□□ -1.44
SSP120YLR250W NMA2P53204 395 aa6.08□□□□□ -1.44
SSP120YLR250W CEG1Q01159 459 aaPredicted RBP6.08□□□□□ -1.44
SSP120YLR250W VMS1Q04311 632 aaKnown RBP6.08□□□□□ -1.44
SSP120YLR250W ECM22Q05958 814 aaPredicted RBP6.08□□□□□ -1.44
SSP120YLR250W IWR1Q07532 353 aaPredicted RBP6.08□□□□□ -1.44
SSP120YLR250W YOR387CQ08910 206 aa6.08□□□□□ -1.44
SSP120YLR250W TEL1P38110 2787 aa6.08□□□□□ -1.44
SSP120YLR250W RNR1P21524 888 aaKnown RBP6.07□□□□□ -1.44
SSP120YLR250W PSO2P30620 661 aa6.07□□□□□ -1.44
SSP120YLR250W EFB1P32471 206 aaKnown RBP6.07□□□□□ -1.44
SSP120YLR250W SAC6P32599 642 aaKnown RBP6.07□□□□□ -1.44
SSP120YLR250W TSA1P34760 196 aaKnown RBP6.07□□□□□ -1.44
SSP120YLR250W YBL036CP38197 257 aa6.07□□□□□ -1.44
SSP120YLR250W YBR225WP38321 900 aa6.07□□□□□ -1.44
SSP120YLR250W NUP60P39705 539 aa6.07□□□□□ -1.44
SSP120YLR250W DOT6P40059 670 aaKnown RBP6.07□□□□□ -1.44
SSP120YLR250W KAP123P40069 1113 aaKnown RBP6.07□□□□□ -1.44
SSP120YLR250W YIL161WP40449 235 aaKnown RBP6.07□□□□□ -1.44
SSP120YLR250W ASG7P46993 209 aa6.07□□□□□ -1.44
SSP120YLR250W CPR7P47103 393 aa6.07□□□□□ -1.44
SSP120YLR250W YPR084WQ06821 456 aa6.07□□□□□ -1.44
SSP120YLR250W RLP24Q07915 199 aaKnown RBP6.07□□□□□ -1.44
SSP120YLR250W FAL1Q12099 399 aaKnown RBP6.07□□□□□ -1.44
SSP120YLR250W STB3Q12427 513 aa6.07□□□□□ -1.44
SSP120YLR250W MPD2Q99316 277 aa6.07□□□□□ -1.44
SSP120YLR250W NUM1Q00402 2748 aa6.06□□□□□ -1.44
SSP120YLR250W SCJ1P25303 377 aa6.06□□□□□ -1.44
SSP120YLR250W VBA3P25594 458 aa6.06□□□□□ -1.44
SSP120YLR250W GPI10P30777 616 aa6.06□□□□□ -1.44
SSP120YLR250W MET4P32389 672 aa6.06□□□□□ -1.44
SSP120YLR250W YKL023WP36103 277 aaKnown RBP6.06□□□□□ -1.44
SSP120YLR250W VBA5P36172 582 aa6.06□□□□□ -1.44
SSP120YLR250W RFT1P38206 574 aaPredicted RBP6.06□□□□□ -1.44
SSP120YLR250W FHL1P39521 936 aa6.06□□□□□ -1.44
SSP120YLR250W DSE1P40077 573 aa6.06□□□□□ -1.44
SSP120YLR250W YJR054WP47114 497 aa6.06□□□□□ -1.44
SSP120YLR250W IMP4P53941 290 aaKnown RBP6.06□□□□□ -1.44
SSP120YLR250W SEG1Q04279 960 aa6.06□□□□□ -1.44
SSP120YLR250W DDC1Q08949 612 aa6.06□□□□□ -1.44
SSP120YLR250W YRR1Q12172 810 aa6.06□□□□□ -1.44
SSP120YLR250W GIS3Q12418 502 aa6.06□□□□□ -1.44
SSP120YLR250W OM45P16547 393 aa6.05□□□□□ -1.44
SSP120YLR250W LRE1P25579 583 aaKnown RBP6.05□□□□□ -1.44
SSP120YLR250W XRS2P33301 854 aa6.05□□□□□ -1.44
SSP120YLR250W TIF5P38431 405 aaKnown RBP6.05□□□□□ -1.44
SSP120YLR250W NMD3P38861 518 aaKnown RBP6.05□□□□□ -1.44
SSP120YLR250W CDC1P40986 491 aa6.05□□□□□ -1.44
SSP120YLR250W ERG10P41338 398 aaKnown RBP6.05□□□□□ -1.44
SSP120YLR250W SBE2P42223 864 aaKnown RBP6.05□□□□□ -1.44
SSP120YLR250W GUF1P46943 645 aa6.05□□□□□ -1.44
SSP120YLR250W RPA49Q01080 415 aaPredicted RBP6.05□□□□□ -1.44
SSP120YLR250W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
SSP120YLR250W MTD1Q02046 320 aaKnown RBP6.05□□□□□ -1.44
SSP120YLR250W MZM1Q03429 123 aaPredicted RBP6.05□□□□□ -1.44
SSP120YLR250W PPM1Q04081 328 aa6.05□□□□□ -1.44
SSP120YLR250W AFT2Q08957 416 aa6.05□□□□□ -1.44
SSP120YLR250W YDL206WQ12424 762 aa6.05□□□□□ -1.44
SSP120YLR250W REV1P12689 985 aa6.04□□□□□ -1.44
SSP120YLR250W COX11P19516 300 aaKnown RBP6.04□□□□□ -1.44
SSP120YLR250W KIN3P22209 435 aa6.04□□□□□ -1.44
SSP120YLR250W DSS4P32601 143 aa6.04□□□□□ -1.44
SSP120YLR250W TCD2P36101 447 aaKnown RBP6.04□□□□□ -1.44
SSP120YLR250W SNF7P39929 240 aaKnown RBP6.04□□□□□ -1.44
SSP120YLR250W SHQ1P40486 507 aaPredicted RBP6.04□□□□□ -1.44
SSP120YLR250W YIR007WP40566 764 aa6.04□□□□□ -1.44
SSP120YLR250W STE20Q03497 939 aaKnown RBP6.04□□□□□ -1.44
SSP120YLR250W SPP382Q06411 708 aaPredicted RBP6.04□□□□□ -1.44
SSP120YLR250W RCL1Q08096 367 aaPredicted RBP6.04□□□□□ -1.44
SSP120YLR250W LPX1Q12405 387 aaKnown RBP6.04□□□□□ -1.44
SSP120YLR250W ECM3Q99252 613 aa6.04□□□□□ -1.44
SSP120YLR250W KDX1P36005 433 aa6.03□□□□□ -1.44
SSP120YLR250W RAD55P38953 406 aa6.03□□□□□ -1.44
SSP120YLR250W RSM26P47141 266 aa6.03□□□□□ -1.44
SSP120YLR250W YGR237CP50089 785 aa6.03□□□□□ -1.44
SSP120YLR250W HRD3Q05787 833 aa6.03□□□□□ -1.44
SSP120YLR250W NBP2Q12163 236 aa6.03□□□□□ -1.44
SSP120YLR250W GPA1P08539 472 aa6.02□□□□□ -1.45
SSP120YLR250W DAL2P25335 343 aa6.02□□□□□ -1.45
SSP120YLR250W RPC25P35718 212 aa6.02□□□□□ -1.45
SSP120YLR250W GIP1P38229 639 aa6.02□□□□□ -1.45
SSP120YLR250W YER130CP39959 443 aa6.02□□□□□ -1.45
SSP120YLR250W RPT2P40327 437 aaKnown RBP6.02□□□□□ -1.45
SSP120YLR250W AIP1P46680 615 aaKnown RBP6.02□□□□□ -1.45
SSP120YLR250W PFD1P46988 109 aa6.02□□□□□ -1.45
SSP120YLR250W DAN4P47179 1161 aa6.02□□□□□ -1.45
SSP120YLR250W VEL1P53058 206 aa6.02□□□□□ -1.45
SSP120YLR250W YGL036WP53185 909 aaPredicted RBP6.02□□□□□ -1.45
SSP120YLR250W COQ6P53318 479 aa6.02□□□□□ -1.45
SSP120YLR250W YNL144CP53907 740 aa6.02□□□□□ -1.45
SSP120YLR250W PIR3Q03180 325 aa6.02□□□□□ -1.45
SSP120YLR250W GIR2Q03768 265 aaPredicted RBP6.02□□□□□ -1.45
SSP120YLR250W HEL2Q05580 639 aaKnown RBP6.02□□□□□ -1.45
SSP120YLR250W VPS54Q12071 889 aa6.02□□□□□ -1.45
SSP120YLR250W LCB4Q12246 624 aa6.02□□□□□ -1.45
SSP120YLR250W AI5_BETAQ9ZZX0 354 aa6.02□□□□□ -1.45
SSP120YLR250W RPS9AO13516 197 aaKnown RBP6.01□□□□□ -1.45
SSP120YLR250W MSF1P08425 469 aa6.01□□□□□ -1.45
SSP120YLR250W HSF1P10961 833 aa6.01□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 47.6 ms