RNA–Protein interactions for RNA: YLR180W

SAM1, Transcript of S-adenosylmethionine synthetase, yeast

Gene SAM1, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAM1	YLR180W	COG4	Q06096	861 aa		10.36	□□□□□ -0.75
SAM1	YLR180W	YPQ1	Q12010	308 aa		10.36	□□□□□ -0.75
SAM1	YLR180W	CDC53	Q12018	815 aa	Known RBP	10.36	□□□□□ -0.75
SAM1	YLR180W	MTF1	P14908	341 aa	Known RBP	10.35	□□□□□ -0.75
SAM1	YLR180W	YKL091C	P33324	310 aa	Known RBP	10.35	□□□□□ -0.75
SAM1	YLR180W	EFM2	P38347	419 aa		10.35	□□□□□ -0.75
SAM1	YLR180W	STR2	P47164	639 aa		10.35	□□□□□ -0.75
SAM1	YLR180W	DAN4	P47179	1161 aa		10.35	□□□□□ -0.75
SAM1	YLR180W	ALF1	P53904	254 aa		10.35	□□□□□ -0.75
SAM1	YLR180W	YAP7	Q08182	245 aa		10.35	□□□□□ -0.75
SAM1	YLR180W	SGT2	Q12118	346 aa	Known RBP	10.35	□□□□□ -0.75
SAM1	YLR180W	YRR1	Q12172	810 aa		10.35	□□□□□ -0.75
SAM1	YLR180W	ACC1	Q00955	2233 aa	Known RBP	10.34	□□□□□ -0.75
SAM1	YLR180W	TPK1	P06244	397 aa		10.34	□□□□□ -0.75
SAM1	YLR180W	PPH22	P23595	377 aa		10.34	□□□□□ -0.75
SAM1	YLR180W	GPI10	P30777	616 aa		10.34	□□□□□ -0.75
SAM1	YLR180W	RAD16	P31244	790 aa		10.34	□□□□□ -0.75
SAM1	YLR180W	MFT1	P33441	392 aa	Known RBP	10.34	□□□□□ -0.75
SAM1	YLR180W	PPS1	P38148	807 aa		10.34	□□□□□ -0.75
SAM1	YLR180W	MIP6	P38760	659 aa	Known RBP	10.34	□□□□□ -0.75
SAM1	YLR180W	SPT8	P38915	602 aa		10.34	□□□□□ -0.75
SAM1	YLR180W	YDL057W	Q07379	328 aa		10.34	□□□□□ -0.75
SAM1	YLR180W	TCO89	Q08921	799 aa		10.34	□□□□□ -0.75
SAM1	YLR180W	SEC65	P29478	273 aa		10.33	□□□□□ -0.76
SAM1	YLR180W	TSA1	P34760	196 aa	Known RBP	10.33	□□□□□ -0.76
SAM1	YLR180W	YBR056W	P38081	501 aa		10.33	□□□□□ -0.76
SAM1	YLR180W	SHE3	P38272	425 aa	Known RBP	10.33	□□□□□ -0.76
SAM1	YLR180W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	10.33	□□□□□ -0.76	not detected
SAM1	YLR180W	HSH155	P49955	971 aa	Known RBP	10.33	□□□□□ -0.76
SAM1	YLR180W	ALT1	P52893	592 aa		10.33	□□□□□ -0.76
SAM1	YLR180W	HMI1	Q12039	706 aa		10.33	□□□□□ -0.76
SAM1	YLR180W	RPS6A	P0CX37	236 aa	Known RBP	10.32	□□□□□ -0.76
SAM1	YLR180W	RPS6B	P0CX38	236 aa	Predicted RBP	10.32	□□□□□ -0.76
SAM1	YLR180W	VMA1	P17255	1071 aa	Known RBP	10.32	□□□□□ -0.76
SAM1	YLR180W	SHM1	P37292	490 aa	Predicted RBP	10.32	□□□□□ -0.76
SAM1	YLR180W	YFL034W	P43564	1073 aa		10.32	□□□□□ -0.76
SAM1	YLR180W	GYL1	Q04322	720 aa		10.32	□□□□□ -0.76
SAM1	YLR180W	PRM6	Q04705	352 aa		10.32	□□□□□ -0.76
SAM1	YLR180W	YLR287C	Q05881	355 aa		10.32	□□□□□ -0.76
SAM1	YLR180W	BSP1	Q06604	576 aa		10.32	□□□□□ -0.76
SAM1	YLR180W	YPL277C	Q08989	487 aa		10.32	□□□□□ -0.76
SAM1	YLR180W	APL4	Q12028	832 aa		10.32	□□□□□ -0.76
SAM1	YLR180W	PHO8	P11491	566 aa		10.31	□□□□□ -0.76
SAM1	YLR180W	PSE1	P32337	1089 aa	Known RBP	10.31	□□□□□ -0.76
SAM1	YLR180W	CSE1	P33307	960 aa		10.31	□□□□□ -0.76
SAM1	YLR180W	YEL1	P34225	687 aa		10.31	□□□□□ -0.76
SAM1	YLR180W	YKR051W	P36142	418 aa		10.31	□□□□□ -0.76
SAM1	YLR180W	NPP2	P39997	493 aa		10.31	□□□□□ -0.76
SAM1	YLR180W	VFA1	P40080	203 aa		10.31	□□□□□ -0.76
SAM1	YLR180W	TOS3	P43637	560 aa		10.31	□□□□□ -0.76
SAM1	YLR180W	NMA2	P53204	395 aa		10.31	□□□□□ -0.76
SAM1	YLR180W	HOS3	Q02959	697 aa	Known RBP	10.31	□□□□□ -0.76
SAM1	YLR180W	VPS38	Q05919	439 aa		10.31	□□□□□ -0.76
SAM1	YLR180W	YOL075C	Q08234	1294 aa		10.31	□□□□□ -0.76
SAM1	YLR180W	NEW1	Q08972	1196 aa	Known RBP	10.31	□□□□□ -0.76
SAM1	YLR180W	GPM2	Q12008	311 aa		10.31	□□□□□ -0.76
SAM1	YLR180W	MED1	Q12321	566 aa		10.31	□□□□□ -0.76
SAM1	YLR180W	NDJ1	Q12366	352 aa		10.31	□□□□□ -0.76
SAM1	YLR180W	APL1	P27351	700 aa		10.3	□□□□□ -0.76
SAM1	YLR180W	MET4	P32389	672 aa		10.3	□□□□□ -0.76
SAM1	YLR180W	RTT107	P38850	1070 aa		10.3	□□□□□ -0.76
SAM1	YLR180W	FAA3	P39002	694 aa		10.3	□□□□□ -0.76
SAM1	YLR180W	HFM1	P51979	1187 aa		10.3	□□□□□ -0.76
SAM1	YLR180W	ATG9	Q12142	997 aa		10.3	□□□□□ -0.76
SAM1	YLR180W	PET111	P08468	800 aa		10.29	□□□□□ -0.76
SAM1	YLR180W	PDC6	P26263	563 aa	Known RBP	10.29	□□□□□ -0.76
SAM1	YLR180W	MUD1	P32605	298 aa	Known RBP	10.29	□□□□□ -0.76
SAM1	YLR180W	TKL2	P33315	681 aa		10.29	□□□□□ -0.76
SAM1	YLR180W	AGP2	P38090	596 aa		10.29	□□□□□ -0.76
SAM1	YLR180W	DOT6	P40059	670 aa	Known RBP	10.29	□□□□□ -0.76
SAM1	YLR180W	ERG5	P54781	538 aa		10.29	□□□□□ -0.76
SAM1	YLR180W	SPO75	Q07798	868 aa		10.29	□□□□□ -0.76
SAM1	YLR180W	YPL216W	Q08964	1102 aa		10.29	□□□□□ -0.76
SAM1	YLR180W	FLC1	Q08967	793 aa		10.29	□□□□□ -0.76
SAM1	YLR180W	RRP6	Q12149	733 aa	Known RBP	10.29	□□□□□ -0.76
SAM1	YLR180W	SEC23	P15303	768 aa	Known RBP	10.28	□□□□□ -0.76
SAM1	YLR180W	GAC1	P28006	793 aa		10.28	□□□□□ -0.76
SAM1	YLR180W	SWE1	P32944	819 aa		10.28	□□□□□ -0.76
SAM1	YLR180W	CAJ1	P39101	391 aa		10.28	□□□□□ -0.76
SAM1	YLR180W	GIP4	P39732	760 aa		10.28	□□□□□ -0.76
SAM1	YLR180W	OSW7	P43611	510 aa		10.28	□□□□□ -0.76
SAM1	YLR180W	NBP1	P52919	319 aa	Predicted RBP	10.28	□□□□□ -0.76
SAM1	YLR180W	UTP5	Q04177	643 aa	Known RBP	10.28	□□□□□ -0.76
SAM1	YLR180W	NOP58	Q12499	511 aa	Known RBP	10.28	□□□□□ -0.76
SAM1	YLR180W	DAL7	P21826	554 aa		10.27	□□□□□ -0.77
SAM1	YLR180W	PTC3	P34221	468 aa	Known RBP	10.27	□□□□□ -0.77
SAM1	YLR180W	RPC25	P35718	212 aa		10.27	□□□□□ -0.77
SAM1	YLR180W	KDX1	P36005	433 aa		10.27	□□□□□ -0.77
SAM1	YLR180W	TCD2	P36101	447 aa	Known RBP	10.27	□□□□□ -0.77
SAM1	YLR180W	YPT35	P38815	214 aa	Known RBP	10.27	□□□□□ -0.77
SAM1	YLR180W	GGA2	P38817	585 aa	Known RBP	10.27	□□□□□ -0.77
SAM1	YLR180W	PCF11	P39081	626 aa	Predicted RBP	10.27	□□□□□ -0.77
SAM1	YLR180W	NUP60	P39705	539 aa		10.27	□□□□□ -0.77
SAM1	YLR180W	YAP5	P40574	245 aa		10.27	□□□□□ -0.77
SAM1	YLR180W	CEP3	P40969	608 aa		10.27	□□□□□ -0.77
SAM1	YLR180W	SMC3	P47037	1230 aa		10.27	□□□□□ -0.77
SAM1	YLR180W	GCN5	Q03330	439 aa		10.27	□□□□□ -0.77
SAM1	YLR180W	EAF1	Q06337	982 aa		10.27	□□□□□ -0.77
SAM1	YLR180W	NAT1	P12945	854 aa	Known RBP	10.26	□□□□□ -0.77
SAM1	YLR180W	STE5	P32917	917 aa		10.26	□□□□□ -0.77

Retrieved 100 of 5,963 RNA–protein pairs in 60.2 ms