RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W CCR4P31384 837 aaKnown RBP2.79□□□□□ -1.96
SDC25YLL016W MDJ1P35191 511 aa2.79□□□□□ -1.96
SDC25YLL016W YKR075CP36155 307 aa2.79□□□□□ -1.96
SDC25YLL016W APM3P38153 483 aa2.79□□□□□ -1.96
SDC25YLL016W SRP72P38688 640 aaKnown RBP2.79□□□□□ -1.96
SDC25YLL016W YIL092WP40497 633 aa2.79□□□□□ -1.96
SDC25YLL016W YCG1Q06680 1035 aa2.79□□□□□ -1.96
SDC25YLL016W SDH5Q08230 162 aa2.79□□□□□ -1.96
SDC25YLL016W SOG2Q08817 791 aa2.79□□□□□ -1.96
SDC25YLL016W DPH6Q12429 685 aa2.79□□□□□ -1.96
SDC25YLL016W VPS5Q92331 675 aa2.79□□□□□ -1.96
SDC25YLL016W DIF1O13577 133 aa2.79□□□□□ -1.96
SDC25YLL016W AFR1P33304 620 aa2.79□□□□□ -1.96
SDC25YLL016W SDS22P36047 338 aa2.79□□□□□ -1.96
SDC25YLL016W ARL1P38116 183 aaKnown RBP2.79□□□□□ -1.96
SDC25YLL016W UME6P39001 836 aa2.79□□□□□ -1.96
SDC25YLL016W YER158CP40095 573 aa2.79□□□□□ -1.96
SDC25YLL016W VHR1P40522 640 aa2.79□□□□□ -1.96
SDC25YLL016W FAF1P40546 346 aaPredicted RBP2.79□□□□□ -1.96
SDC25YLL016W MSB3P48566 633 aaPredicted RBP2.79□□□□□ -1.96
SDC25YLL016W CEG1Q01159 459 aaPredicted RBP2.79□□□□□ -1.96
SDC25YLL016W MEC3Q02574 474 aa2.79□□□□□ -1.96
SDC25YLL016W HRQ1Q05549 1077 aa2.79□□□□□ -1.96
SDC25YLL016W RPS9AO13516 197 aaKnown RBP2.79□□□□□ -1.96
SDC25YLL016W GFA1P14742 717 aaKnown RBP2.79□□□□□ -1.96
SDC25YLL016W KIP1P28742 1111 aa2.79□□□□□ -1.96
SDC25YLL016W NGG1P32494 702 aa2.79□□□□□ -1.96
SDC25YLL016W PAH1P32567 862 aa2.79□□□□□ -1.96
SDC25YLL016W OAF3P36023 863 aa2.79□□□□□ -1.96
SDC25YLL016W RLP7P40693 322 aaKnown RBP2.79□□□□□ -1.96
SDC25YLL016W VTC4P47075 721 aa2.79□□□□□ -1.96
SDC25YLL016W SAP4P53036 818 aa2.79□□□□□ -1.96
SDC25YLL016W BTN2P53286 410 aa2.79□□□□□ -1.96
SDC25YLL016W MRPL13Q02204 264 aa2.79□□□□□ -1.96
SDC25YLL016W HOS3Q02959 697 aaKnown RBP2.79□□□□□ -1.96
SDC25YLL016W TDA9Q04545 1251 aa2.79□□□□□ -1.96
SDC25YLL016W RPN7Q06103 429 aaKnown RBP2.79□□□□□ -1.96
SDC25YLL016W ACM1Q08981 209 aa2.79□□□□□ -1.96
SDC25YLL016W YPL277CQ08989 487 aa2.79□□□□□ -1.96
SDC25YLL016W CWC2Q12046 339 aaPredicted RBP2.79□□□□□ -1.96
SDC25YLL016W DCS2Q12123 353 aa2.79□□□□□ -1.96
SDC25YLL016W QNS1P38795 714 aaKnown RBP2.78□□□□□ -1.96
SDC25YLL016W NMD3P38861 518 aaKnown RBP2.78□□□□□ -1.96
SDC25YLL016W HXT6P39003 570 aaKnown RBP2.78□□□□□ -1.96
SDC25YLL016W HXT7P39004 570 aa2.78□□□□□ -1.96
SDC25YLL016W EAF6P47128 113 aa2.78□□□□□ -1.96
SDC25YLL016W LSC2P53312 427 aa2.78□□□□□ -1.96
SDC25YLL016W ELA1P53861 379 aaPredicted RBP2.78□□□□□ -1.96
SDC25YLL016W GSF2Q04697 403 aaKnown RBP2.78□□□□□ -1.96
SDC25YLL016W SGD1Q06132 899 aa2.78□□□□□ -1.96
SDC25YLL016W BUG1Q12191 341 aa2.78□□□□□ -1.96
SDC25YLL016W SMC6Q12749 1114 aa2.78□□□□□ -1.96
SDC25YLL016W SES1P07284 462 aaKnown RBP2.78□□□□□ -1.96
SDC25YLL016W PFK2P16862 959 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
SDC25YLL016W CDC48P25694 835 aaKnown RBP2.78□□□□□ -1.96
SDC25YLL016W DBF4P32325 704 aa2.78□□□□□ -1.96
SDC25YLL016W ANP1P32629 500 aa2.78□□□□□ -1.96
SDC25YLL016W SAS3P34218 831 aa2.78□□□□□ -1.96
SDC25YLL016W PSF2P40359 213 aa2.78□□□□□ -1.96
SDC25YLL016W RRT14P40470 206 aa2.78□□□□□ -1.96
SDC25YLL016W CEP3P40969 608 aa2.78□□□□□ -1.96
SDC25YLL016W YFR016CP43597 1233 aaKnown RBP2.78□□□□□ -1.96
SDC25YLL016W SOK2P53438 785 aaPredicted RBP2.78□□□□□ -1.96
SDC25YLL016W SQS1P53866 767 aaKnown RBP2.78□□□□□ -1.96
SDC25YLL016W CBK1P53894 756 aa2.78□□□□□ -1.96
SDC25YLL016W SYF1Q04048 859 aaPredicted RBP2.78□□□□□ -1.96
SDC25YLL016W LRS4Q04087 347 aaKnown RBP2.78□□□□□ -1.96
SDC25YLL016W HLR1Q04429 423 aa2.78□□□□□ -1.96
SDC25YLL016W YKU80Q04437 629 aa2.78□□□□□ -1.96
SDC25YLL016W IRC3Q06683 689 aa2.78□□□□□ -1.96
SDC25YLL016W MRP10O75012 95 aa2.77□□□□□ -1.97
SDC25YLL016W PRC1P00729 532 aa2.77□□□□□ -1.97
SDC25YLL016W RAD16P31244 790 aa2.77□□□□□ -1.97
SDC25YLL016W ASH1P34233 588 aa2.77□□□□□ -1.97
SDC25YLL016W SHM2P37291 469 aaKnown RBP2.77□□□□□ -1.97
SDC25YLL016W TSL1P38427 1098 aaKnown RBP2.77□□□□□ -1.97
SDC25YLL016W YJR098CP47139 656 aa2.77□□□□□ -1.97
SDC25YLL016W GCV1P48015 400 aa2.77□□□□□ -1.97
SDC25YLL016W GUP1P53154 560 aa2.77□□□□□ -1.97
SDC25YLL016W NOG2P53742 486 aaKnown RBP2.77□□□□□ -1.97
SDC25YLL016W CIA1Q05583 330 aa2.77□□□□□ -1.97
SDC25YLL016W HFI1Q12060 488 aa2.77□□□□□ -1.97
SDC25YLL016W SLM3Q12093 417 aa2.77□□□□□ -1.97
SDC25YLL016W ARP7Q12406 477 aa2.77□□□□□ -1.97
SDC25YLL016W YRF1-4O13559 1382 aa2.77□□□□□ -1.97
SDC25YLL016W RTC1Q08281 1341 aa2.77□□□□□ -1.97
SDC25YLL016W HOP1P20050 605 aa2.77□□□□□ -1.97
SDC25YLL016W CMK1P27466 446 aaKnown RBP2.77□□□□□ -1.97
SDC25YLL016W XRS2P33301 854 aa2.77□□□□□ -1.97
SDC25YLL016W DHR2P36009 735 aaPredicted RBP2.77□□□□□ -1.97
SDC25YLL016W YKR051WP36142 418 aa2.77□□□□□ -1.97
SDC25YLL016W FAT1P38225 669 aa2.77□□□□□ -1.97
SDC25YLL016W ETP1P38748 585 aaKnown RBP2.77□□□□□ -1.97
SDC25YLL016W EAF5P39995 279 aa2.77□□□□□ -1.97
SDC25YLL016W KHA1P40309 873 aa2.77□□□□□ -1.97
SDC25YLL016W MAD3P47074 515 aa2.77□□□□□ -1.97
SDC25YLL016W TIM10P87108 93 aa2.77□□□□□ -1.97
SDC25YLL016W NSE5Q03718 556 aa2.77□□□□□ -1.97
SDC25YLL016W YLL054CQ12244 843 aa2.77□□□□□ -1.97
SDC25YLL016W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
Retrieved 100 of 5,963 RNA–protein pairs in 53.9 ms