RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W URB2P47108 1174 aa6.68□□□□□ -1.34
GEF1YJR040W NCS6P53088 359 aa6.68□□□□□ -1.34
GEF1YJR040W CPR6P53691 371 aaKnown RBP6.68□□□□□ -1.34
GEF1YJR040W TSR2Q06672 205 aaKnown RBP6.68□□□□□ -1.34
GEF1YJR040W SMC5Q08204 1093 aa6.68□□□□□ -1.34
GEF1YJR040W MSC6Q08818 692 aaKnown RBP6.68□□□□□ -1.34
GEF1YJR040W TCO89Q08921 799 aa6.68□□□□□ -1.34
GEF1YJR040W SBP1P10080 294 aaKnown RBP6.67□□□□□ -1.34
GEF1YJR040W YCR051WP25631 222 aa6.67□□□□□ -1.34
GEF1YJR040W TRK2P28584 889 aa6.67□□□□□ -1.34
GEF1YJR040W CBF2P32504 956 aa6.67□□□□□ -1.34
GEF1YJR040W TIF3P34167 436 aaKnown RBP6.67□□□□□ -1.34
GEF1YJR040W YJR039WP47107 1121 aa6.67□□□□□ -1.34
GEF1YJR040W MCM6P53091 1017 aaKnown RBP6.67□□□□□ -1.34
GEF1YJR040W PLP1Q04004 230 aa6.67□□□□□ -1.34
GEF1YJR040W AIM41Q12032 185 aa6.67□□□□□ -1.34
GEF1YJR040W NHA1Q99271 985 aa6.67□□□□□ -1.34
GEF1YJR040W SUP45P12385 437 aaKnown RBP6.67□□□□□ -1.34
GEF1YJR040W POL3P15436 1097 aa6.67□□□□□ -1.34
GEF1YJR040W RPC37P36121 282 aa6.67□□□□□ -1.34
GEF1YJR040W PPX1P38698 397 aa6.67□□□□□ -1.34
GEF1YJR040W RPN3P40016 523 aaKnown RBP6.67□□□□□ -1.34
GEF1YJR040W BRO1P48582 844 aa6.67□□□□□ -1.34
GEF1YJR040W RPA14P50106 137 aa6.67□□□□□ -1.34
GEF1YJR040W MSH6Q03834 1242 aa6.67□□□□□ -1.34
GEF1YJR040W RIO1Q12196 484 aaKnown RBP6.67□□□□□ -1.34
GEF1YJR040W MED1Q12321 566 aa6.67□□□□□ -1.34
GEF1YJR040W ILV6P25605 309 aaKnown RBP6.66□□□□□ -1.34
GEF1YJR040W NAM7P30771 971 aaKnown RBP6.66□□□□□ -1.34
GEF1YJR040W NIP1P32497 812 aaKnown RBP6.66□□□□□ -1.34
GEF1YJR040W RPN2P32565 945 aaKnown RBP6.66□□□□□ -1.34
GEF1YJR040W GPT2P36148 743 aa6.66□□□□□ -1.34
GEF1YJR040W UBP13P38187 747 aa6.66□□□□□ -1.34
GEF1YJR040W SMX2P40204 77 aaKnown RBP6.66□□□□□ -1.34
GEF1YJR040W NBP1P52919 319 aaPredicted RBP6.66□□□□□ -1.34
GEF1YJR040W TEL2P53038 688 aa6.66□□□□□ -1.34
GEF1YJR040W YGR021WP53212 290 aa6.66□□□□□ -1.34
GEF1YJR040W COG6P53959 839 aa6.66□□□□□ -1.34
GEF1YJR040W YKR005CQ02203 525 aa6.66□□□□□ -1.34
GEF1YJR040W YMR321CQ04898 105 aa6.66□□□□□ -1.34
GEF1YJR040W SVF1Q05515 481 aa6.66□□□□□ -1.34
GEF1YJR040W GPN2Q08726 347 aaPredicted RBP6.66□□□□□ -1.34
GEF1YJR040W YPL277CQ08989 487 aa6.66□□□□□ -1.34
GEF1YJR040W SPO21Q12411 609 aa6.66□□□□□ -1.34
GEF1YJR040W PWP1P21304 576 aaKnown RBP6.66□□□□□ -1.34
GEF1YJR040W MRF1P30775 413 aaPredicted RBP6.66□□□□□ -1.34
GEF1YJR040W PYC2P32327 1180 aaKnown RBP6.66□□□□□ -1.34
GEF1YJR040W SSE1P32589 693 aaKnown RBP6.66□□□□□ -1.34
GEF1YJR040W YKL050CP35736 922 aa6.66□□□□□ -1.34
GEF1YJR040W ECM2P38241 364 aaKnown RBP6.66□□□□□ -1.34
GEF1YJR040W SAP185P40856 1058 aa6.66□□□□□ -1.34
GEF1YJR040W TDA10P42938 290 aa6.66□□□□□ -1.34
GEF1YJR040W RIM8P53179 542 aa6.66□□□□□ -1.34
GEF1YJR040W DIP5P53388 608 aa6.66□□□□□ -1.34
GEF1YJR040W MUB1Q03162 620 aa6.66□□□□□ -1.34
GEF1YJR040W YML119WQ03208 357 aa6.66□□□□□ -1.34
GEF1YJR040W YDL057WQ07379 328 aa6.66□□□□□ -1.34
GEF1YJR040W YLL058WQ12198 575 aa6.66□□□□□ -1.34
GEF1YJR040W LSO1Q3E827 93 aa6.66□□□□□ -1.34
GEF1YJR040W SEY1Q99287 776 aa6.66□□□□□ -1.34
GEF1YJR040W TRP2P00899 507 aaKnown RBP6.65□□□□□ -1.34
GEF1YJR040W PHO8P11491 566 aa6.65□□□□□ -1.34
GEF1YJR040W SNA3P14359 133 aa6.65□□□□□ -1.34
GEF1YJR040W MLS1P30952 554 aa6.65□□□□□ -1.34
GEF1YJR040W YSC83P32792 385 aa6.65□□□□□ -1.34
GEF1YJR040W PET112P33893 541 aa6.65□□□□□ -1.34
GEF1YJR040W YEL1P34225 687 aa6.65□□□□□ -1.34
GEF1YJR040W ATG19P35193 415 aa6.65□□□□□ -1.34
GEF1YJR040W PBP2P38151 413 aaKnown RBP RIP-Chip data6.65□□□□□ -1.34not detected
GEF1YJR040W TAF1P46677 1066 aa6.65□□□□□ -1.34
GEF1YJR040W SET2P46995 733 aaKnown RBP6.65□□□□□ -1.34
GEF1YJR040W ROD1Q02805 837 aa6.65□□□□□ -1.34
GEF1YJR040W SXM1Q04175 944 aaKnown RBP6.65□□□□□ -1.34
GEF1YJR040W HFD1Q04458 532 aa6.65□□□□□ -1.34
GEF1YJR040W FRA1Q07825 749 aa6.65□□□□□ -1.34
GEF1YJR040W DBP5P20449 482 aaKnown RBP6.65□□□□□ -1.35
GEF1YJR040W AFT1P22149 690 aa6.65□□□□□ -1.35
GEF1YJR040W YUR1P26725 428 aa6.65□□□□□ -1.35
GEF1YJR040W GPI10P30777 616 aa6.65□□□□□ -1.35
GEF1YJR040W SIN4P32259 974 aa6.65□□□□□ -1.35
GEF1YJR040W KTR2P33550 425 aa6.65□□□□□ -1.35
GEF1YJR040W LCP5P40079 357 aaPredicted RBP6.65□□□□□ -1.35
GEF1YJR040W SYG1P40528 902 aa6.65□□□□□ -1.35
GEF1YJR040W DSL1P53847 754 aa6.65□□□□□ -1.35
GEF1YJR040W MGR3Q04472 501 aa6.65□□□□□ -1.35
GEF1YJR040W YDR278CQ05612 105 aa6.65□□□□□ -1.35
GEF1YJR040W ACM1Q08981 209 aa6.65□□□□□ -1.35
GEF1YJR040W HFI1Q12060 488 aa6.65□□□□□ -1.35
GEF1YJR040W NCA2Q12374 616 aa6.65□□□□□ -1.35
GEF1YJR040W ENO1P00924 437 aaKnown RBP6.64□□□□□ -1.35
GEF1YJR040W RPL17AP05740 184 aaKnown RBP6.64□□□□□ -1.35
GEF1YJR040W RPB2P08518 1224 aaKnown RBP6.64□□□□□ -1.35
GEF1YJR040W POX1P13711 748 aa6.64□□□□□ -1.35
GEF1YJR040W SRV2P17555 526 aaKnown RBP6.64□□□□□ -1.35
GEF1YJR040W ADE2P21264 571 aaKnown RBP6.64□□□□□ -1.35
GEF1YJR040W COT1P32798 439 aa6.64□□□□□ -1.35
GEF1YJR040W RCK2P38623 610 aa6.64□□□□□ -1.35
GEF1YJR040W ULP2P40537 1034 aaPredicted RBP6.64□□□□□ -1.35
GEF1YJR040W AIM21P40563 679 aa6.64□□□□□ -1.35
GEF1YJR040W RPL17BP46990 184 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms