RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeastyeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB2YDL084W CDC12P32468 407 aaKnown RBP6.05□□□□□ -1.44
SUB2YDL084W YME1P32795 747 aa6.05□□□□□ -1.44
SUB2YDL084W SEC66P33754 206 aa6.05□□□□□ -1.44
SUB2YDL084W SEG2P34250 1132 aa6.05□□□□□ -1.44
SUB2YDL084W TYS1P36421 394 aaKnown RBP6.05□□□□□ -1.44
SUB2YDL084W RVS167P39743 482 aaKnown RBP6.05□□□□□ -1.44
SUB2YDL084W VID28P40547 921 aa6.05□□□□□ -1.44
SUB2YDL084W STB4P50104 949 aa6.05□□□□□ -1.44
SUB2YDL084W TAF4P50105 388 aa6.05□□□□□ -1.44
SUB2YDL084W PIP2P52960 996 aa6.05□□□□□ -1.44
SUB2YDL084W ESBP6P53918 673 aa6.05□□□□□ -1.44
SUB2YDL084W YPL062WQ02781 134 aa6.05□□□□□ -1.44
SUB2YDL084W KAP120Q02932 1032 aa6.05□□□□□ -1.44
SUB2YDL084W ABZ2Q03266 374 aa6.05□□□□□ -1.44
SUB2YDL084W SPC24Q04477 213 aa6.05□□□□□ -1.44
SUB2YDL084W GFD1Q04839 188 aaKnown RBP6.05□□□□□ -1.44
SUB2YDL084W RSA3Q05942 220 aaKnown RBP6.05□□□□□ -1.44
SUB2YDL084W YCG1Q06680 1035 aa6.05□□□□□ -1.44
SUB2YDL084W VAC14Q06708 880 aa6.05□□□□□ -1.44
SUB2YDL084W YDL144CQ07589 356 aa6.05□□□□□ -1.44
SUB2YDL084W PIN2Q12057 282 aa6.05□□□□□ -1.44
SUB2YDL084W YLR125WQ12138 136 aa6.05□□□□□ -1.44
SUB2YDL084W RRP6Q12149 733 aaKnown RBP6.05□□□□□ -1.44
SUB2YDL084W SMC4Q12267 1418 aa6.05□□□□□ -1.44
SUB2YDL084W SIR3P06701 978 aa6.04□□□□□ -1.44
SUB2YDL084W ENA1P13587 1091 aa6.04□□□□□ -1.44
SUB2YDL084W GRR1P24814 1151 aa6.04□□□□□ -1.44
SUB2YDL084W MSH1P25846 959 aa6.04□□□□□ -1.44
SUB2YDL084W CAF4P36130 643 aa6.04□□□□□ -1.44
SUB2YDL084W POL12P38121 705 aaPredicted RBP6.04□□□□□ -1.44
SUB2YDL084W COS111P38308 924 aa6.04□□□□□ -1.44
SUB2YDL084W STP2P38704 541 aa6.04□□□□□ -1.44
SUB2YDL084W SIP3P38717 1229 aa6.04□□□□□ -1.44
SUB2YDL084W RCY1P39531 840 aa6.04□□□□□ -1.44
SUB2YDL084W BDH2P39713 417 aa6.04□□□□□ -1.44
SUB2YDL084W THO1P40040 218 aaKnown RBP6.04□□□□□ -1.44
SUB2YDL084W YIL161WP40449 235 aaKnown RBP6.04□□□□□ -1.44
SUB2YDL084W COX16P47081 118 aa6.04□□□□□ -1.44
SUB2YDL084W STR2P47164 639 aa6.04□□□□□ -1.44
SUB2YDL084W YDL183CP48569 320 aa6.04□□□□□ -1.44
SUB2YDL084W GUP1P53154 560 aa6.04□□□□□ -1.44
SUB2YDL084W RPN14P53196 417 aa6.04□□□□□ -1.44
SUB2YDL084W MRPL50P53724 139 aa6.04□□□□□ -1.44
SUB2YDL084W GOR1P53839 350 aa6.04□□□□□ -1.44
SUB2YDL084W TOF1P53840 1238 aa6.04□□□□□ -1.44
SUB2YDL084W DAK1P54838 584 aaKnown RBP6.04□□□□□ -1.44
SUB2YDL084W ENA2Q01896 1091 aa6.04□□□□□ -1.44
SUB2YDL084W ARP10Q04549 284 aa6.04□□□□□ -1.44
SUB2YDL084W GMC2Q06201 188 aa6.04□□□□□ -1.44
SUB2YDL084W PIG1Q06216 648 aa6.04□□□□□ -1.44
SUB2YDL084W VPS36Q06696 566 aa6.04□□□□□ -1.44
SUB2YDL084W GRS2Q06817 618 aa6.04□□□□□ -1.44
SUB2YDL084W YPD1Q07688 167 aa6.04□□□□□ -1.44
SUB2YDL084W SDH5Q08230 162 aa6.04□□□□□ -1.44
SUB2YDL084W PPM2Q08282 695 aa6.04□□□□□ -1.44
SUB2YDL084W SGO1Q08490 590 aa6.04□□□□□ -1.44
SUB2YDL084W RRG1Q12167 365 aaPredicted RBP6.04□□□□□ -1.44
SUB2YDL084W ENA5Q12691 1091 aa6.04□□□□□ -1.44
SUB2YDL084W SRN2Q99176 213 aa6.04□□□□□ -1.44
SUB2YDL084W YOR019WQ99248 730 aa6.04□□□□□ -1.44
SUB2YDL084W RPP2BP02400 110 aaKnown RBP6.03□□□□□ -1.44
SUB2YDL084W HAP4P14064 554 aa6.03□□□□□ -1.44
SUB2YDL084W NCP1P16603 691 aaKnown RBP6.03□□□□□ -1.44
SUB2YDL084W DAP2P18962 818 aa6.03□□□□□ -1.44
SUB2YDL084W DBF2P22204 572 aa6.03□□□□□ -1.44
SUB2YDL084W RPI1P23250 407 aaKnown RBP6.03□□□□□ -1.44
SUB2YDL084W CDC15P27636 974 aa6.03□□□□□ -1.44
SUB2YDL084W KRE2P27809 442 aa6.03□□□□□ -1.44
SUB2YDL084W PTP2P29461 750 aa6.03□□□□□ -1.44
SUB2YDL084W THI4P32318 326 aa6.03□□□□□ -1.44
SUB2YDL084W KNS1P32350 737 aaPredicted RBP6.03□□□□□ -1.44
SUB2YDL084W SMI1P32566 505 aa6.03□□□□□ -1.44
SUB2YDL084W NUP133P36161 1157 aa6.03□□□□□ -1.44
SUB2YDL084W SEA4P38164 1038 aa6.03□□□□□ -1.44
SUB2YDL084W MPT5P39016 859 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
SUB2YDL084W YER137CP40083 148 aaKnown RBP6.03□□□□□ -1.44
SUB2YDL084W CNN1P43618 361 aa6.03□□□□□ -1.44
SUB2YDL084W YJR120WP47157 116 aa6.03□□□□□ -1.44
SUB2YDL084W YBP2P53169 641 aa6.03□□□□□ -1.44
SUB2YDL084W ARC35P53731 342 aaKnown RBP6.03□□□□□ -1.44
SUB2YDL084W SFB2P53953 876 aa6.03□□□□□ -1.44
SUB2YDL084W PKH3Q03306 898 aaPredicted RBP6.03□□□□□ -1.44
SUB2YDL084W SHE9Q04172 456 aa6.03□□□□□ -1.44
SUB2YDL084W RTT103Q05543 409 aa6.03□□□□□ -1.44
SUB2YDL084W ECM7Q06200 448 aa6.03□□□□□ -1.44
SUB2YDL084W HTZ1Q12692 134 aaKnown RBP6.03□□□□□ -1.44
SUB2YDL084W YKL068W-AQ3E826 78 aa6.03□□□□□ -1.44
SUB2YDL084W LAG2Q92325 660 aa6.03□□□□□ -1.44
SUB2YDL084W HSH49Q99181 213 aaPredicted RBP6.03□□□□□ -1.44
SUB2YDL084W FRT1Q99332 602 aa6.03□□□□□ -1.44
SUB2YDL084W CDC19P00549 500 aaKnown RBP6.02□□□□□ -1.45
SUB2YDL084W HXK1P04806 485 aaKnown RBP6.02□□□□□ -1.45
SUB2YDL084W SNF1P06782 633 aaKnown RBP6.02□□□□□ -1.45
SUB2YDL084W LAT1P12695 482 aaKnown RBP6.02□□□□□ -1.45
SUB2YDL084W RSR1P13856 272 aa6.02□□□□□ -1.45
SUB2YDL084W SEC63P14906 663 aa6.02□□□□□ -1.45
SUB2YDL084W FUS3P16892 353 aaKnown RBP6.02□□□□□ -1.45
SUB2YDL084W GAP1P19145 602 aaPredicted RBP6.02□□□□□ -1.45
SUB2YDL084W DBF4P32325 704 aa6.02□□□□□ -1.45
SUB2YDL084W PHO11P35842 467 aa6.02□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms