RNA–Protein interactions for RNA: YCR069W

CPR4, Transcript of Peptidyl-prolyl cis-trans isomerase (cyclophilin), yeast

Gene CPR4, Length 957 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CPR4	YCR069W	HSF1	P10961	833 aa		5.21	□□□□□ -1.58
CPR4	YCR069W	ICL1	P28240	557 aa	Predicted RBP	5.21	□□□□□ -1.58
CPR4	YCR069W	DCG1	P32460	244 aa		5.21	□□□□□ -1.58
CPR4	YCR069W	CCC2	P38995	1004 aa		5.21	□□□□□ -1.58
CPR4	YCR069W	CHA4	P43634	648 aa		5.21	□□□□□ -1.58
CPR4	YCR069W	PSP2	P50109	593 aa	Known RBP	5.21	□□□□□ -1.58
CPR4	YCR069W	YKE2	P52553	114 aa		5.21	□□□□□ -1.58
CPR4	YCR069W	ALD6	P54115	500 aa	Known RBP	5.21	□□□□□ -1.58
CPR4	YCR069W	TIM50	Q02776	476 aa		5.21	□□□□□ -1.58
CPR4	YCR069W	COG8	Q04632	607 aa		5.21	□□□□□ -1.58
CPR4	YCR069W	ETT1	Q08421	412 aa	Known RBP	5.21	□□□□□ -1.58
CPR4	YCR069W	PCL8	Q08966	492 aa		5.21	□□□□□ -1.58
CPR4	YCR069W	RPL19A	P0CX82	189 aa	Known RBP	5.2	□□□□□ -1.58
CPR4	YCR069W	RPL19B	P0CX83	189 aa	Predicted RBP	5.2	□□□□□ -1.58
CPR4	YCR069W	MATALPHA2	P0CY08	210 aa		5.2	□□□□□ -1.58
CPR4	YCR069W	HMLALPHA2	P0CY09	210 aa		5.2	□□□□□ -1.58
CPR4	YCR069W	CBP3	P21560	335 aa		5.2	□□□□□ -1.58
CPR4	YCR069W	IME2	P32581	645 aa		5.2	□□□□□ -1.58
CPR4	YCR069W	GRX7	P38068	203 aa		5.2	□□□□□ -1.58
CPR4	YCR069W	YMR147W	P40218	223 aa	Known RBP	5.2	□□□□□ -1.58
CPR4	YCR069W	YIR042C	P40586	236 aa		5.2	□□□□□ -1.58
CPR4	YCR069W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
CPR4	YCR069W	PEX14	P53112	341 aa		5.2	□□□□□ -1.58
CPR4	YCR069W	PIB2	P53191	635 aa		5.2	□□□□□ -1.58
CPR4	YCR069W	HST1	P53685	503 aa		5.2	□□□□□ -1.58
CPR4	YCR069W	MRD1	Q06106	887 aa	Known RBP	5.2	□□□□□ -1.58
CPR4	YCR069W	PUS9	Q12069	462 aa		5.2	□□□□□ -1.58
CPR4	YCR069W	PNS1	Q12412	539 aa		5.2	□□□□□ -1.58
CPR4	YCR069W	CAF20	P12962	161 aa	Known RBP	5.19	□□□□□ -1.58
CPR4	YCR069W	PMI40	P29952	429 aa	Known RBP	5.19	□□□□□ -1.58
CPR4	YCR069W	MRP8	P35719	219 aa		5.19	□□□□□ -1.58
CPR4	YCR069W	BDH2	P39713	417 aa		5.19	□□□□□ -1.58
CPR4	YCR069W	MSE1	P48525	536 aa		5.19	□□□□□ -1.58
CPR4	YCR069W	RPS15	Q01855	142 aa	Known RBP	5.19	□□□□□ -1.58
CPR4	YCR069W	PPM2	Q08282	695 aa		5.19	□□□□□ -1.58
CPR4	YCR069W	KCS1	Q12494	1050 aa		5.19	□□□□□ -1.58
CPR4	YCR069W	AIM44	Q99299	758 aa		5.19	□□□□□ -1.58
CPR4	YCR069W	RAD61	Q99359	647 aa		5.19	□□□□□ -1.58
CPR4	YCR069W	RPL22A	P05749	121 aa	Known RBP	5.18	□□□□□ -1.58
CPR4	YCR069W	BIK1	P11709	440 aa		5.18	□□□□□ -1.58
CPR4	YCR069W	PGI1	P12709	554 aa	Known RBP	5.18	□□□□□ -1.58
CPR4	YCR069W	BMH2	P34730	273 aa	Known RBP	5.18	□□□□□ -1.58
CPR4	YCR069W	MAL31	P38156	614 aa		5.18	□□□□□ -1.58
CPR4	YCR069W	YER158C	P40095	573 aa		5.18	□□□□□ -1.58
CPR4	YCR069W	EXG2	P52911	562 aa		5.18	□□□□□ -1.58
CPR4	YCR069W	SUN4	P53616	420 aa		5.18	□□□□□ -1.58
CPR4	YCR069W	ARP5	P53946	755 aa		5.18	□□□□□ -1.58
CPR4	YCR069W	YPR196W	Q06595	470 aa		5.18	□□□□□ -1.58
CPR4	YCR069W	CEX1	Q12453	761 aa		5.18	□□□□□ -1.58
CPR4	YCR069W	FLO1	P32768	1537 aa		5.18	□□□□□ -1.58
CPR4	YCR069W	COQ1	P18900	473 aa		5.17	□□□□□ -1.58
CPR4	YCR069W	RPS7A	P26786	190 aa	Known RBP	5.17	□□□□□ -1.58
CPR4	YCR069W	RPC82	P32349	654 aa		5.17	□□□□□ -1.58
CPR4	YCR069W	MYO3	P36006	1272 aa		5.17	□□□□□ -1.58
CPR4	YCR069W	RSM25	P40496	264 aa		5.17	□□□□□ -1.58
CPR4	YCR069W	YGR117C	P53270	476 aa		5.17	□□□□□ -1.58
CPR4	YCR069W	WHI4	Q07655	649 aa	Known RBP	5.17	□□□□□ -1.58
CPR4	YCR069W	YPL150W	Q12152	901 aa		5.17	□□□□□ -1.58
CPR4	YCR069W	TOP1	P04786	769 aa		5.16	□□□□□ -1.58
CPR4	YCR069W	MAK31	P23059	88 aa		5.16	□□□□□ -1.58
CPR4	YCR069W	PRE8	P23639	250 aa		5.16	□□□□□ -1.58
CPR4	YCR069W	IMP2'	P32351	346 aa		5.16	□□□□□ -1.58
CPR4	YCR069W	ANP1	P32629	500 aa		5.16	□□□□□ -1.58
CPR4	YCR069W	ATG19	P35193	415 aa		5.16	□□□□□ -1.58
CPR4	YCR069W	DEF1	P35732	738 aa	Known RBP	5.16	□□□□□ -1.58
CPR4	YCR069W	YKR078W	P36158	585 aa	Known RBP	5.16	□□□□□ -1.58
CPR4	YCR069W	TSL1	P38427	1098 aa	Known RBP	5.16	□□□□□ -1.58
CPR4	YCR069W	TOM71	P38825	639 aa	Known RBP	5.16	□□□□□ -1.58
CPR4	YCR069W	SPF1	P39986	1215 aa	Known RBP	5.16	□□□□□ -1.58
CPR4	YCR069W	URM1	P40554	99 aa	Predicted RBP	5.16	□□□□□ -1.58
CPR4	YCR069W	AIM21	P40563	679 aa		5.16	□□□□□ -1.58
CPR4	YCR069W	BUD6	P41697	788 aa		5.16	□□□□□ -1.58
CPR4	YCR069W	NCS6	P53088	359 aa		5.16	□□□□□ -1.58
CPR4	YCR069W	YLR407W	Q06070	228 aa		5.16	□□□□□ -1.58
CPR4	YCR069W	SKG3	Q06315	1026 aa		5.16	□□□□□ -1.58
CPR4	YCR069W	TDA5	Q06417	326 aa	Known RBP	5.16	□□□□□ -1.58
CPR4	YCR069W	KEL3	Q08979	651 aa	Predicted RBP	5.16	□□□□□ -1.58
CPR4	YCR069W	NPC2	Q12408	173 aa		5.16	□□□□□ -1.58
CPR4	YCR069W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	5.15	□□□□□ -1.59	not detected
CPR4	YCR069W	RNR3	P21672	869 aa	Known RBP	5.15	□□□□□ -1.59
CPR4	YCR069W	NPP1	P25353	742 aa		5.15	□□□□□ -1.59
CPR4	YCR069W	AAR2	P32357	355 aa	Predicted RBP	5.15	□□□□□ -1.59
CPR4	YCR069W	STE5	P32917	917 aa		5.15	□□□□□ -1.59
CPR4	YCR069W	RPT3	P33298	428 aa	Known RBP	5.15	□□□□□ -1.59
CPR4	YCR069W	PAM1	P37304	830 aa	Known RBP	5.15	□□□□□ -1.59
CPR4	YCR069W	VPS8	P39702	1274 aa		5.15	□□□□□ -1.59
CPR4	YCR069W	IRR1	P40541	1150 aa		5.15	□□□□□ -1.59
CPR4	YCR069W	GSM1	P42950	618 aa		5.15	□□□□□ -1.59
CPR4	YCR069W	SQS1	P53866	767 aa	Known RBP	5.15	□□□□□ -1.59
CPR4	YCR069W	RPT6	Q01939	405 aa	Known RBP	5.15	□□□□□ -1.59
CPR4	YCR069W	VPS20	Q04272	221 aa		5.15	□□□□□ -1.59
CPR4	YCR069W	YLR278C	Q05854	1341 aa		5.15	□□□□□ -1.59
CPR4	YCR069W	TUS1	Q06412	1307 aa		5.15	□□□□□ -1.59
CPR4	YCR069W	ADE8	P04161	214 aa		5.14	□□□□□ -1.59
CPR4	YCR069W	PFK1	P16861	987 aa	Known RBP	5.14	□□□□□ -1.59
CPR4	YCR069W	CDC48	P25694	835 aa	Known RBP	5.14	□□□□□ -1.59
CPR4	YCR069W	MSP1	P28737	362 aa		5.14	□□□□□ -1.59
CPR4	YCR069W	RPL8B	P29453	256 aa	Known RBP	5.14	□□□□□ -1.59
CPR4	YCR069W	PRX1	P34227	261 aa	Known RBP	5.14	□□□□□ -1.59
CPR4	YCR069W	CST26	P38226	397 aa		5.14	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms