RNA–Protein interactions for RNA: YBR040W

FIG1, Transcript of Integral membrane protein required for efficient mating, yeast

Gene FIG1, Length 897 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FIG1	YBR040W	MTL1	P53214	551 aa		4.65	□□□□□ -1.67
FIG1	YBR040W	RTS3	P53289	263 aa		4.65	□□□□□ -1.67
FIG1	YBR040W	MTQ2	Q03920	221 aa	Predicted RBP	4.65	□□□□□ -1.67
FIG1	YBR040W	CTK1	Q03957	528 aa	Known RBP	4.65	□□□□□ -1.67
FIG1	YBR040W	YOL057W	Q08225	711 aa		4.65	□□□□□ -1.67
FIG1	YBR040W	SGO1	Q08490	590 aa		4.65	□□□□□ -1.67
FIG1	YBR040W	MRH1	Q12117	320 aa	Predicted RBP	4.65	□□□□□ -1.67
FIG1	YBR040W	HIR1	P32479	840 aa		4.64	□□□□□ -1.67
FIG1	YBR040W	APT2	P36973	181 aa		4.64	□□□□□ -1.67
FIG1	YBR040W	PAF1	P38351	445 aa		4.64	□□□□□ -1.67
FIG1	YBR040W	CBR1	P38626	284 aa	Known RBP	4.64	□□□□□ -1.67
FIG1	YBR040W	REV7	P38927	245 aa		4.64	□□□□□ -1.67
FIG1	YBR040W	DOT6	P40059	670 aa	Known RBP	4.64	□□□□□ -1.67
FIG1	YBR040W	SSL2	Q00578	843 aa		4.64	□□□□□ -1.67
FIG1	YBR040W	FAP7	Q12055	197 aa	Predicted RBP	4.64	□□□□□ -1.67
FIG1	YBR040W	HMG1	P12683	1054 aa		4.63	□□□□□ -1.67
FIG1	YBR040W	YKR018C	P36114	725 aa		4.63	□□□□□ -1.67
FIG1	YBR040W	TRZ1	P36159	838 aa	Predicted RBP	4.63	□□□□□ -1.67
FIG1	YBR040W	ENP1	P38333	483 aa	Known RBP	4.63	□□□□□ -1.67
FIG1	YBR040W	PCM1	P38628	557 aa	Known RBP	4.63	□□□□□ -1.67
FIG1	YBR040W	CCT3	P39077	534 aa	Known RBP	4.63	□□□□□ -1.67
FIG1	YBR040W	YJR096W	P47137	282 aa		4.63	□□□□□ -1.67
FIG1	YBR040W	TEL2	P53038	688 aa		4.63	□□□□□ -1.67
FIG1	YBR040W	ATG33	Q06485	197 aa		4.63	□□□□□ -1.67
FIG1	YBR040W	NDJ1	Q12366	352 aa		4.63	□□□□□ -1.67
FIG1	YBR040W	ERG6	P25087	383 aa	Known RBP	4.62	□□□□□ -1.67
FIG1	YBR040W	MRC1	P25588	1096 aa		4.62	□□□□□ -1.67
FIG1	YBR040W	MVD1	P32377	396 aa	Known RBP	4.62	□□□□□ -1.67
FIG1	YBR040W	EUG1	P32474	517 aa		4.62	□□□□□ -1.67
FIG1	YBR040W	YEL1	P34225	687 aa		4.62	□□□□□ -1.67
FIG1	YBR040W	GRX7	P38068	203 aa		4.62	□□□□□ -1.67
FIG1	YBR040W	FMO1	P38866	432 aa		4.62	□□□□□ -1.67
FIG1	YBR040W	LYS9	P38999	446 aa		4.62	□□□□□ -1.67
FIG1	YBR040W	PCL10	P53124	433 aa		4.62	□□□□□ -1.67
FIG1	YBR040W	MCM21	Q06675	368 aa		4.62	□□□□□ -1.67
FIG1	YBR040W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
FIG1	YBR040W	GIN4	Q12263	1142 aa		4.62	□□□□□ -1.67
FIG1	YBR040W	YKL033W-A	Q86ZR7	236 aa		4.62	□□□□□ -1.67
FIG1	YBR040W	CDC43	P18898	376 aa		4.61	□□□□□ -1.67
FIG1	YBR040W	PRP19	P32523	503 aa	Known RBP	4.61	□□□□□ -1.67
FIG1	YBR040W	SFB3	P38810	929 aa		4.61	□□□□□ -1.67
FIG1	YBR040W	PAN2	P53010	1115 aa	Predicted RBP	4.61	□□□□□ -1.67
FIG1	YBR040W	PEX8	P53248	589 aa		4.61	□□□□□ -1.67
FIG1	YBR040W	GUD1	Q07729	489 aa		4.61	□□□□□ -1.67
FIG1	YBR040W	HRP1	Q99383	534 aa	Known RBP	4.61	□□□□□ -1.67
FIG1	YBR040W	KIN3	P22209	435 aa		4.6	□□□□□ -1.67
FIG1	YBR040W	MNN4	P36044	1178 aa		4.6	□□□□□ -1.67
FIG1	YBR040W	YBR071W	P38243	211 aa		4.6	□□□□□ -1.67
FIG1	YBR040W	NUP60	P39705	539 aa		4.6	□□□□□ -1.67
FIG1	YBR040W	YAP1802	P53309	568 aa		4.6	□□□□□ -1.67
FIG1	YBR040W	COG6	P53959	839 aa		4.6	□□□□□ -1.67
FIG1	YBR040W	ARP4	P80428	489 aa		4.6	□□□□□ -1.67
FIG1	YBR040W	REC102	Q02721	264 aa		4.6	□□□□□ -1.67
FIG1	YBR040W	LEE1	Q02799	301 aa	Known RBP	4.6	□□□□□ -1.67
FIG1	YBR040W	COG8	Q04632	607 aa		4.6	□□□□□ -1.67
FIG1	YBR040W	RNR1	P21524	888 aa	Known RBP	4.59	□□□□□ -1.67
FIG1	YBR040W	DAL3	P32459	195 aa		4.59	□□□□□ -1.67
FIG1	YBR040W	TDP1	P38319	544 aa		4.59	□□□□□ -1.67
FIG1	YBR040W	CKB2	P38930	258 aa		4.59	□□□□□ -1.67
FIG1	YBR040W	COX18	P53239	316 aa		4.59	□□□□□ -1.67
FIG1	YBR040W	HFD1	Q04458	532 aa		4.59	□□□□□ -1.67
FIG1	YBR040W	RGC1	Q06108	1083 aa	Known RBP	4.59	□□□□□ -1.67
FIG1	YBR040W	SUT2	Q12286	268 aa		4.59	□□□□□ -1.67
FIG1	YBR040W	SIR3	P06701	978 aa		4.58	□□□□□ -1.68
FIG1	YBR040W	PYC1	P11154	1178 aa	Known RBP	4.58	□□□□□ -1.68
FIG1	YBR040W	CCR4	P31384	837 aa	Known RBP	4.58	□□□□□ -1.68
FIG1	YBR040W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
FIG1	YBR040W	OAF1	P39720	1047 aa	Predicted RBP	4.58	□□□□□ -1.68
FIG1	YBR040W	VPS73	P53142	486 aa	Known RBP	4.58	□□□□□ -1.68
FIG1	YBR040W	SMX3	P54999	86 aa	Predicted RBP	4.58	□□□□□ -1.68
FIG1	YBR040W	GFA1	P14742	717 aa	Known RBP	4.57	□□□□□ -1.68
FIG1	YBR040W	PLC1	P32383	869 aa		4.57	□□□□□ -1.68
FIG1	YBR040W	PHO11	P35842	467 aa		4.57	□□□□□ -1.68
FIG1	YBR040W	PHO12	P38693	467 aa		4.57	□□□□□ -1.68
FIG1	YBR040W	GET2	P40056	285 aa		4.57	□□□□□ -1.68
FIG1	YBR040W	YNL195C	P40168	261 aa		4.57	□□□□□ -1.68
FIG1	YBR040W	GID8	P40208	455 aa		4.57	□□□□□ -1.68
FIG1	YBR040W	NDC80	P40460	691 aa		4.57	□□□□□ -1.68
FIG1	YBR040W	BRE5	P53741	515 aa	Known RBP	4.57	□□□□□ -1.68
FIG1	YBR040W	TGL2	P54857	326 aa		4.57	□□□□□ -1.68
FIG1	YBR040W	HMO1	Q03973	246 aa	Known RBP	4.57	□□□□□ -1.68
FIG1	YBR040W	SND1	Q04007	877 aa		4.57	□□□□□ -1.68
FIG1	YBR040W	SEC6	P32844	805 aa		4.56	□□□□□ -1.68
FIG1	YBR040W	TFC4	P33339	1025 aa		4.56	□□□□□ -1.68
FIG1	YBR040W	APN2	P38207	520 aa		4.56	□□□□□ -1.68
FIG1	YBR040W	SSZ1	P38788	538 aa	Known RBP	4.56	□□□□□ -1.68
FIG1	YBR040W	YJL206C	P39529	758 aa		4.56	□□□□□ -1.68
FIG1	YBR040W	TPM2	P40414	161 aa		4.56	□□□□□ -1.68
FIG1	YBR040W	SET2	P46995	733 aa	Known RBP	4.56	□□□□□ -1.68
FIG1	YBR040W	NOP9	P47077	666 aa	Known RBP	4.56	□□□□□ -1.68
FIG1	YBR040W	YTM1	Q12024	460 aa	Predicted RBP	4.56	□□□□□ -1.68
FIG1	YBR040W	MLH3	Q12083	715 aa		4.56	□□□□□ -1.68
FIG1	YBR040W	ZRT2	Q12436	422 aa		4.56	□□□□□ -1.68
FIG1	YBR040W	ECM3	Q99252	613 aa		4.56	□□□□□ -1.68
FIG1	YBR040W	HCA4	P20448	770 aa	Known RBP	4.55	□□□□□ -1.68
FIG1	YBR040W	PEX1	P24004	1043 aa		4.55	□□□□□ -1.68
FIG1	YBR040W	NUG1	P40010	520 aa	Known RBP	4.55	□□□□□ -1.68
FIG1	YBR040W	TAH11	P47112	604 aa		4.55	□□□□□ -1.68
FIG1	YBR040W	CTR1	P49573	406 aa		4.55	□□□□□ -1.68
FIG1	YBR040W	FHN1	P53279	174 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms