RNA–Protein interactions for RNA: YAL011W

SWC3, Transcript of Protein of unknown function, yeast

Gene SWC3, Length 1,878 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWC3	YAL011W	THI6	P41835	540 aa		4.9	□□□□□ -1.63
SWC3	YAL011W	ISM1	P48526	1002 aa		4.9	□□□□□ -1.63
SWC3	YAL011W	RPA14	P50106	137 aa		4.9	□□□□□ -1.63
SWC3	YAL011W	SUT1	P53032	299 aa	Known RBP	4.9	□□□□□ -1.63
SWC3	YAL011W	ALF1	P53904	254 aa		4.9	□□□□□ -1.63
SWC3	YAL011W	GTR1	Q00582	310 aa		4.9	□□□□□ -1.63
SWC3	YAL011W	YLR287C	Q05881	355 aa		4.9	□□□□□ -1.63
SWC3	YAL011W	RSC2	Q06488	889 aa		4.9	□□□□□ -1.63
SWC3	YAL011W	HDA3	Q06623	655 aa		4.9	□□□□□ -1.63
SWC3	YAL011W	BRE4	Q07660	1125 aa		4.9	□□□□□ -1.63
SWC3	YAL011W	ISA1	Q07821	250 aa	Predicted RBP	4.9	□□□□□ -1.63
SWC3	YAL011W	MDM38	Q08179	573 aa		4.9	□□□□□ -1.63
SWC3	YAL011W	YAP7	Q08182	245 aa		4.9	□□□□□ -1.63
SWC3	YAL011W	HMI1	Q12039	706 aa		4.9	□□□□□ -1.63
SWC3	YAL011W	MSS18	P08593	268 aa		4.89	□□□□□ -1.63
SWC3	YAL011W	SPO12	P17123	173 aa		4.89	□□□□□ -1.63
SWC3	YAL011W	ADP1	P25371	1049 aa		4.89	□□□□□ -1.63
SWC3	YAL011W	PET309	P32522	965 aa	Predicted RBP	4.89	□□□□□ -1.63
SWC3	YAL011W	NPL6	P32832	435 aa		4.89	□□□□□ -1.63
SWC3	YAL011W	POP2	P39008	433 aa		4.89	□□□□□ -1.63
SWC3	YAL011W	JEM1	P40358	645 aa		4.89	□□□□□ -1.63
SWC3	YAL011W	YIL166C	P40445	542 aa		4.89	□□□□□ -1.63
SWC3	YAL011W	YJL171C	P46992	396 aa		4.89	□□□□□ -1.63
SWC3	YAL011W	CAF120	P53836	1060 aa		4.89	□□□□□ -1.63
SWC3	YAL011W	CBK1	P53894	756 aa		4.89	□□□□□ -1.63
SWC3	YAL011W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
SWC3	YAL011W	AIM33	Q04516	312 aa		4.89	□□□□□ -1.63
SWC3	YAL011W	CDC73	Q06697	393 aa		4.89	□□□□□ -1.63
SWC3	YAL011W	ADY3	Q07732	790 aa		4.89	□□□□□ -1.63
SWC3	YAL011W	CWC2	Q12046	339 aa	Predicted RBP	4.89	□□□□□ -1.63
SWC3	YAL011W	MTF2	P10849	440 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	IDI1	P15496	288 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	OM45	P16547	393 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	GSY1	P23337	708 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	RAD51	P25454	400 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	RER1	P25560	188 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	YEL1	P34225	687 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	DHR2	P36009	735 aa	Predicted RBP	4.88	□□□□□ -1.63
SWC3	YAL011W	REI1	P38344	393 aa	Predicted RBP	4.88	□□□□□ -1.63
SWC3	YAL011W	CCC2	P38995	1004 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	YER156C	P40093	338 aa	Known RBP	4.88	□□□□□ -1.63
SWC3	YAL011W	NDC80	P40460	691 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	SHQ1	P40486	507 aa	Predicted RBP	4.88	□□□□□ -1.63
SWC3	YAL011W	VNX1	P42839	908 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	HFM1	P51979	1187 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	MTC3	P53077	123 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	ERG5	P54781	538 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	RRB1	Q04225	511 aa	Known RBP	4.88	□□□□□ -1.63
SWC3	YAL011W	TAF11	Q04226	346 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	RBA50	Q04418	439 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	YSH1	Q06224	779 aa	Predicted RBP	4.88	□□□□□ -1.63
SWC3	YAL011W	PIB1	Q06651	286 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	LAP2	Q10740	671 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	TUS1	Q06412	1307 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	TRP2	P00899	507 aa	Known RBP	4.88	□□□□□ -1.63
SWC3	YAL011W	YEL076C-A	P0CX16	216 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	YLR464W	P0CX17	216 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	PHO81	P17442	1178 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	MRPL33	P20084	86 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	ISY1	P21374	235 aa	Predicted RBP	4.88	□□□□□ -1.63
SWC3	YAL011W	APN1	P22936	367 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	RIP-Chip
SWC3	YAL011W	CST26	P38226	397 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	SRP72	P38688	640 aa	Known RBP	4.88	□□□□□ -1.63
SWC3	YAL011W	YEL076C	P39971	216 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	VFA1	P40080	203 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	IRC6	P43615	237 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	RET2	P43621	546 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	SAE2	P46946	345 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	UPF3	P48412	387 aa	Known RBP	4.88	□□□□□ -1.63
SWC3	YAL011W	ULP1	Q02724	621 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	SPO71	Q03868	1245 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	UTP4	Q06679	776 aa	Known RBP	4.88	□□□□□ -1.63
SWC3	YAL011W	SMC6	Q12749	1114 aa		4.88	□□□□□ -1.63
SWC3	YAL011W	PMA1	P05030	918 aa	Known RBP	4.87	□□□□□ -1.63
SWC3	YAL011W	SEC23	P15303	768 aa	Known RBP	4.87	□□□□□ -1.63
SWC3	YAL011W	VMA2	P16140	517 aa	Known RBP	4.87	□□□□□ -1.63
SWC3	YAL011W	STE11	P23561	717 aa		4.87	□□□□□ -1.63
SWC3	YAL011W	CDC48	P25694	835 aa	Known RBP	4.87	□□□□□ -1.63
SWC3	YAL011W	PDC6	P26263	563 aa	Known RBP	4.87	□□□□□ -1.63
SWC3	YAL011W	ABD1	P32783	436 aa	Predicted RBP	4.87	□□□□□ -1.63
SWC3	YAL011W	BEM3	P32873	1128 aa		4.87	□□□□□ -1.63
SWC3	YAL011W	IXR1	P33417	597 aa		4.87	□□□□□ -1.63
SWC3	YAL011W	STV1	P37296	890 aa		4.87	□□□□□ -1.63
SWC3	YAL011W	PPS1	P38148	807 aa		4.87	□□□□□ -1.63
SWC3	YAL011W	AMN1	P38285	549 aa	Predicted RBP	4.87	□□□□□ -1.63
SWC3	YAL011W	NDT80	P38830	627 aa		4.87	□□□□□ -1.63
SWC3	YAL011W	GAA1	P39012	614 aa		4.87	□□□□□ -1.63
SWC3	YAL011W	NOP16	P40007	231 aa	Known RBP	4.87	□□□□□ -1.63
SWC3	YAL011W	UTP7	P40055	554 aa	Known RBP	4.87	□□□□□ -1.63
SWC3	YAL011W	ALR2	P43553	858 aa		4.87	□□□□□ -1.63
SWC3	YAL011W	LSB1	P53281	241 aa		4.87	□□□□□ -1.63
SWC3	YAL011W	BOP3	P53958	396 aa		4.87	□□□□□ -1.63
SWC3	YAL011W	TRM44	Q02648	567 aa	Known RBP	4.87	□□□□□ -1.63
SWC3	YAL011W	GSF2	Q04697	403 aa	Known RBP	4.87	□□□□□ -1.63
SWC3	YAL011W	CRF1	Q04930	467 aa		4.87	□□□□□ -1.63
SWC3	YAL011W	SML1	Q04964	104 aa		4.87	□□□□□ -1.63
SWC3	YAL011W	ISR1	Q06098	443 aa	Known RBP	4.87	□□□□□ -1.63
SWC3	YAL011W	WSC3	Q12215	556 aa		4.87	□□□□□ -1.63
SWC3	YAL011W	ILV1	P00927	576 aa	Known RBP	4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms