RNA–Protein interactions for RNA: ENST00000541893.5

TMEM258-206, Transcript of transmembrane protein 258, humanhuman

TSL 5

Gene TMEM258, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-206ENST00000541893 USHBP1Q8N6Y0 703 aa7.1□□□□□ -1.27
TMEM258-206ENST00000541893 SLC43A3Q8NBI5 491 aa7.1□□□□□ -1.27
TMEM258-206ENST00000541893 PRIMPOLQ96LW4 560 aa7.1□□□□□ -1.27
TMEM258-206ENST00000541893 DNAJC2Q99543 621 aaKnown RBP7.1□□□□□ -1.27
TMEM258-206ENST00000541893 TINF2Q9BSI4 451 aa7.1□□□□□ -1.27
TMEM258-206ENST00000541893 CCSER2Q9H7U1 834 aa7.1□□□□□ -1.27
TMEM258-206ENST00000541893 BRPF3Q9ULD4 1205 aa7.1□□□□□ -1.27
TMEM258-206ENST00000541893 SPG7Q9UQ90 795 aa7.1□□□□□ -1.27
TMEM258-206ENST00000541893 TAF1LQ8IZX4 1826 aa7.09□□□□□ -1.27
TMEM258-206ENST00000541893 HSPA6P17066 643 aa7.09□□□□□ -1.27
TMEM258-206ENST00000541893 ECM1Q16610 540 aa7.09□□□□□ -1.27
TMEM258-206ENST00000541893 C9orf131Q5VYM1 1079 aa7.09□□□□□ -1.27
TMEM258-206ENST00000541893 TRAF7Q6Q0C0 670 aa7.09□□□□□ -1.27
TMEM258-206ENST00000541893 NT5DC4Q86YG4 428 aa7.09□□□□□ -1.27
TMEM258-206ENST00000541893 SLC4A5Q9BY07 1137 aa7.09□□□□□ -1.27
TMEM258-206ENST00000541893 LNPKQ9C0E8 428 aa7.09□□□□□ -1.27
TMEM258-206ENST00000541893 TGIF2Q9GZN2 237 aa7.09□□□□□ -1.27
TMEM258-206ENST00000541893 GGNBP2Q9H3C7 697 aa7.09□□□□□ -1.27
TMEM258-206ENST00000541893 METTL5Q9NRN9 209 aaKnown RBP7.09□□□□□ -1.27
TMEM258-206ENST00000541893 PRKAG2Q9UGJ0 569 aa7.09□□□□□ -1.27
TMEM258-206ENST00000541893 VPS9D1Q9Y2B5 631 aa7.09□□□□□ -1.27
TMEM258-206ENST00000541893 PCDHB9Q9Y5E1 797 aa7.09□□□□□ -1.27
TMEM258-206ENST00000541893 DNMT3AQ9Y6K1 912 aaPredicted RBP7.09□□□□□ -1.27
TMEM258-206ENST00000541893 IGSF1Q8N6C5 1336 aa7.08□□□□□ -1.28
TMEM258-206ENST00000541893 C4BP0C0L5 1744 aa7.08□□□□□ -1.28
TMEM258-206ENST00000541893 PTCD1O75127 700 aaKnown RBP7.08□□□□□ -1.28
TMEM258-206ENST00000541893 DKK1O94907 266 aa7.08□□□□□ -1.28
TMEM258-206ENST00000541893 F12P00748 615 aaPredicted RBP7.08□□□□□ -1.28
TMEM258-206ENST00000541893 ATP2B1P20020 1258 aa7.08□□□□□ -1.28
TMEM258-206ENST00000541893 PTK2Q05397 1052 aa7.08□□□□□ -1.28
TMEM258-206ENST00000541893 GNL2Q13823 731 aaKnown RBP7.08□□□□□ -1.28
TMEM258-206ENST00000541893 HSP90AB2PQ58FF8 381 aa7.08□□□□□ -1.28
TMEM258-206ENST00000541893 GPKOWQ92917 476 aaPredicted RBP eCLIP7.08□□□□□ -1.28
TMEM258-206ENST00000541893 RBCK1Q9BYM8 510 aa7.08□□□□□ -1.28
TMEM258-206ENST00000541893 MRS2Q9HD23 443 aa7.08□□□□□ -1.28
TMEM258-206ENST00000541893 ADCY9O60503 1353 aa7.08□□□□□ -1.28
TMEM258-206ENST00000541893 LOC102724428A0A0B4J2F2 783 aa7.07□□□□□ -1.28
TMEM258-206ENST00000541893 CYP27B1O15528 508 aa7.07□□□□□ -1.28
TMEM258-206ENST00000541893 SIK1P57059 783 aa7.07□□□□□ -1.28
TMEM258-206ENST00000541893 METTL16Q86W50 562 aaKnown RBP7.07□□□□□ -1.28
TMEM258-206ENST00000541893 TMEM87AQ8NBN3 555 aa7.07□□□□□ -1.28
TMEM258-206ENST00000541893 ZNF526Q8TF50 670 aaPredicted RBP7.07□□□□□ -1.28
TMEM258-206ENST00000541893 PIGBQ92521 554 aa7.07□□□□□ -1.28
TMEM258-206ENST00000541893 TMOD3Q9NYL9 352 aa7.07□□□□□ -1.28
TMEM258-206ENST00000541893 SEPT3Q9UH03 358 aa7.07□□□□□ -1.28
TMEM258-206ENST00000541893 ITGB4P16144 1822 aa7.06□□□□□ -1.28
TMEM258-206ENST00000541893 NDUFB5O43674 189 aa7.06□□□□□ -1.28
TMEM258-206ENST00000541893 APLP1P51693 650 aa7.06□□□□□ -1.28
TMEM258-206ENST00000541893 TGFB2P61812 414 aa7.06□□□□□ -1.28
TMEM258-206ENST00000541893 GTF2IP78347 998 aa7.06□□□□□ -1.28
TMEM258-206ENST00000541893 FMR1Q06787 632 aaKnown RBP eCLIP7.06□□□□□ -1.287e-9■■■□□ 17.5
TMEM258-206ENST00000541893 KMT5BQ4FZB7 885 aa7.06□□□□□ -1.28
TMEM258-206ENST00000541893 CCDC102BQ68D86 513 aa7.06□□□□□ -1.28
TMEM258-206ENST00000541893 NOL8Q76FK4 1167 aaKnown RBP7.06□□□□□ -1.28
TMEM258-206ENST00000541893 NLGN1Q8N2Q7 840 aa7.06□□□□□ -1.28
TMEM258-206ENST00000541893 ARMC2Q8NEN0 867 aa7.06□□□□□ -1.28
TMEM258-206ENST00000541893 RNF34Q969K3 372 aa7.06□□□□□ -1.28
TMEM258-206ENST00000541893 DOLKQ9UPQ8 538 aa7.06□□□□□ -1.28
TMEM258-206ENST00000541893 KIAA1024Q9UPX6 916 aa7.06□□□□□ -1.28
TMEM258-206ENST00000541893 PLEKHG2Q9H7P9 1386 aa7.06□□□□□ -1.28
TMEM258-206ENST00000541893 KIF20BQ96Q89 1820 aa7.06□□□□□ -1.28
TMEM258-206ENST00000541893 WASHC2AQ641Q2 1341 aa7.05□□□□□ -1.28
TMEM258-206ENST00000541893 UBR3Q6ZT12 1888 aa7.05□□□□□ -1.28
TMEM258-206ENST00000541893 PKD1L3Q7Z443 1732 aa7.05□□□□□ -1.28
TMEM258-206ENST00000541893 TLDC2A0PJX2 215 aa7.05□□□□□ -1.28
TMEM258-206ENST00000541893 PRPF40AO75400 957 aaKnown RBP7.05□□□□□ -1.28
TMEM258-206ENST00000541893 TOMM70O94826 608 aa7.05□□□□□ -1.28
TMEM258-206ENST00000541893 FAM13AO94988 1023 aa7.05□□□□□ -1.28
TMEM258-206ENST00000541893 TRAPPC3LQ5T215 181 aa7.05□□□□□ -1.28
TMEM258-206ENST00000541893 LDLRAD1Q5T700 205 aa7.05□□□□□ -1.28
TMEM258-206ENST00000541893 PDXDC2PQ6P474 469 aa7.05□□□□□ -1.28
TMEM258-206ENST00000541893 ZNF662Q6ZS27 426 aa7.05□□□□□ -1.28
TMEM258-206ENST00000541893 TMC7Q7Z402 723 aa7.05□□□□□ -1.28
TMEM258-206ENST00000541893 SPNS2Q8IVW8 549 aa7.05□□□□□ -1.28
TMEM258-206ENST00000541893 DHX37Q8IY37 1157 aaKnown RBP7.05□□□□□ -1.28
TMEM258-206ENST00000541893 IFNL2Q8IZJ0 200 aa7.05□□□□□ -1.28
TMEM258-206ENST00000541893 LINC00116Q8NCU8 138 aa7.05□□□□□ -1.28
TMEM258-206ENST00000541893 TPCN2Q8NHX9 752 aa7.05□□□□□ -1.28
TMEM258-206ENST00000541893 HELQQ8TDG4 1101 aa7.05□□□□□ -1.28
TMEM258-206ENST00000541893 MKNK1Q9BUB5 465 aa7.05□□□□□ -1.28
TMEM258-206ENST00000541893 CAPN10Q9HC96 672 aa7.05□□□□□ -1.28
TMEM258-206ENST00000541893 KIAA1468Q9P260 1216 aa7.05□□□□□ -1.28
TMEM258-206ENST00000541893 RABGEF1Q9UJ41 708 aa7.05□□□□□ -1.28
TMEM258-206ENST00000541893 RTCBQ9Y3I0 505 aaKnown RBP7.05□□□□□ -1.28
TMEM258-206ENST00000541893 GOLGB1Q14789 3259 aaKnown RBP7.05□□□□□ -1.28
TMEM258-206ENST00000541893 NCAPD2Q15021 1401 aa7.04□□□□□ -1.28
TMEM258-206ENST00000541893 ERVV-2B6SEH9 535 aa7.04□□□□□ -1.28
TMEM258-206ENST00000541893 ZBTB7BO15156 539 aaPredicted RBP7.04□□□□□ -1.28
TMEM258-206ENST00000541893 TREHO43280 583 aa7.04□□□□□ -1.28
TMEM258-206ENST00000541893 HRO43593 1189 aa7.04□□□□□ -1.28
TMEM258-206ENST00000541893 HSP90AB1P08238 724 aaKnown RBP7.04□□□□□ -1.28
TMEM258-206ENST00000541893 MMP10P09238 476 aa7.04□□□□□ -1.28
TMEM258-206ENST00000541893 GTF2F1P35269 517 aaKnown RBP eCLIP7.04□□□□□ -1.28
TMEM258-206ENST00000541893 FANCCQ00597 558 aa7.04□□□□□ -1.28
TMEM258-206ENST00000541893 MTMR3Q13615 1198 aa7.04□□□□□ -1.28
TMEM258-206ENST00000541893 PTPRNQ16849 979 aa7.04□□□□□ -1.28
TMEM258-206ENST00000541893 MORN1Q5T089 497 aa7.04□□□□□ -1.28
TMEM258-206ENST00000541893 DHX38Q92620 1227 aaKnown RBP7.04□□□□□ -1.28
TMEM258-206ENST00000541893 COL26A1Q96A83 441 aa7.04□□□□□ -1.28
TMEM258-206ENST00000541893 NBPF3Q9H094 633 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms