RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Cep135Q6P5D4 1140 aa15.9■□□□□ 0.14
Pcdha1-202ENSMUST00000193839 Frmd3Q8BHD4 595 aa15.9■□□□□ 0.14
Pcdha1-202ENSMUST00000193839 Tceanc2Q8R2M0 207 aa15.9■□□□□ 0.14
Pcdha1-202ENSMUST00000193839 Lekr1B2RVN1 116 aa15.9■□□□□ 0.14
Pcdha1-202ENSMUST00000193839 Zbtb38Q3LR78 1197 aa15.9■□□□□ 0.14
Pcdha1-202ENSMUST00000193839 Fam193aQ8CGI1 1231 aaKnown RBP15.9■□□□□ 0.14
Pcdha1-202ENSMUST00000193839 CltcQ68FD5 1675 aaKnown RBP15.9■□□□□ 0.14
Pcdha1-202ENSMUST00000193839 Erlin2Q8BFZ9 340 aa15.9■□□□□ 0.14
Pcdha1-202ENSMUST00000193839 Lmod1Q8BVA4 595 aa15.9■□□□□ 0.14
Pcdha1-202ENSMUST00000193839 Zcrb1Q9CZ96 217 aaKnown RBP15.9■□□□□ 0.14
Pcdha1-202ENSMUST00000193839 Rufy3Q9D394 469 aa15.9■□□□□ 0.14
Pcdha1-202ENSMUST00000193839 Topbp1Q6ZQF0 1515 aa15.89■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Prdm11A2AGX3 565 aa15.89■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Zkscan16A2ALW2 728 aa15.89■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Casp1P29452 402 aa15.89■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Calm1P0DP26 149 aaKnown RBP15.89■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Calm2P0DP27 149 aaKnown RBP15.89■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Calm3P0DP28 149 aaKnown RBP15.89■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Krt23Q99PS0 422 aa15.89■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Cep89Q9CZX2 791 aa15.89■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Syt1P46096 421 aa15.89■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Tubb4bP68372 445 aaKnown RBP15.89■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Tbc1d2bQ3U0J8 965 aa15.89■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Hspa4Q61316 841 aa15.89■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Appbp2Q9DAX9 585 aa15.89■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Usp25P57080 1055 aa15.89■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Tbc1d5Q80XQ2 815 aa15.89■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Rbm17Q8JZX4 405 aaKnown RBP15.89■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Pafah1b1P63005 410 aaKnown RBP15.88■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 CalcaP70160 136 aa15.88■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Ccdc162pQ0VG85 912 aa15.88■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Abca9Q8K449 1623 aa15.88■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Jakmip3Q5DTN8 844 aa15.88■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Adora1Q60612 326 aa15.88■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Uhrf1bp1B2KF50 1429 aa15.88■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Rreb1Q3UH06 1700 aaKnown RBP15.88■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 MycnP03966 462 aaKnown RBP15.88■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Kmt5bQ3U8K7 883 aa15.88■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Pram1Q6BCL1 675 aa15.88■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Cul5Q9D5V5 780 aa15.88■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Pcdh10E9PXQ7 1057 aa15.87■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Triml1Q8BVP1 470 aa15.87■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 DymQ8CHY3 669 aa15.87■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Mylk2Q8VCR8 613 aa15.87■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Smc1bQ920F6 1248 aa15.87■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Snw1Q9CSN1 536 aaKnown RBP15.87■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Gigyf1Q99MR1 1044 aaKnown RBP15.87■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 CltaO08585 235 aa15.87■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Usp5P56399 858 aaKnown RBP15.87■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Setd1bQ8CFT2 1985 aa15.87■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Cfap73J3QPZ5 306 aa15.87■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Nlrp9aQ66X03 949 aa15.87■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Stox1B2RQL2 990 aa15.86■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Plbd2Q3TCN2 594 aa15.86■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Tmc2Q8R4P4 888 aa15.86■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Hdac9Q99N13 588 aa15.86■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Irx4Q9QY61 515 aa15.86■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Kifc2O08672 792 aa15.86■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Abcd1P48410 736 aa15.86■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Ncf1Q09014 390 aa15.86■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Utp18Q5SSI6 552 aaKnown RBP15.86■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Ptcd1Q8C2E4 695 aaKnown RBP15.86■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Gtpbp4Q99ME9 634 aaKnown RBP15.86■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Atp7bQ64446 1462 aa15.86■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Myo1bP46735 1107 aa15.86■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 HmcesQ8R1M0 353 aaKnown RBP15.86■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Hs2st1Q8R3H7 356 aa15.86■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Ssfa2Q922B9 1252 aa15.86■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Ccdc112A0AUP1 442 aa15.86■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Igf2bp2Q5SF07 592 aaKnown RBP15.86■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Atp2b4Q6Q477 1205 aa15.86■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 MaddQ80U28 1577 aa15.86■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Gm42641I6L9G2 585 aa15.85■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Zfp251Q6PCX8 632 aa15.85■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 AtripQ8BMG1 785 aa15.85■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Pcdhb22Q91XZ8 794 aa15.85■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Dbndd1Q9CZ00 160 aa15.85■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Ftl2P49945 183 aa15.85■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Znf653Q6YND2 615 aa15.85■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Tmod2Q9JKK7 351 aa15.85■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Myo5cE9Q1F5 1742 aa15.85■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Ccdc121E9Q6D3 323 aa15.85■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Dnm1P39053 867 aa15.85■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Dnajc5P60904 198 aa15.85■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Zbtb21E9Q444 1094 aa15.84■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Abtb2Q7TQI7 1024 aa15.84■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Nap1l1P28656 391 aaKnown RBP15.84■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Ncaph2Q8BSP2 607 aa15.84■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Mlh1Q9JK91 760 aa15.84■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 AdgbG3UZ78 1657 aa15.84■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Txndc16Q7TN22 820 aa15.84■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Rps6kb1Q8BSK8 525 aa15.84■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Atp8b3Q6UQ17 1335 aa15.84■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Arid4aF8VPQ2 1261 aaKnown RBP15.84■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Trim52Q8CDV4 233 aa15.84■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Zbtb22Q9Z0G7 638 aa15.84■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Kank4Q6P9J5 1016 aa15.83■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Ano1Q8BHY3 960 aa15.83■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Bloc1s4Q8VED2 215 aa15.83■□□□□ 0.13
Pcdha1-202ENSMUST00000193839 Sil1Q9EPK6 465 aa15.83■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms