Protein–RNA interactions for Protein: O08585

Clta, Clathrin light chain A, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CltaO08585 Gm25239-201ENSMUST00000174915 86 ntBASIC48.93■■■■■ 5.42
CltaO08585 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC45.38■■■■■ 4.86
CltaO08585 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC44.69■■■■■ 4.74
CltaO08585 Gm24109-201ENSMUST00000175489 103 ntBASIC42.52■■■■■ 4.4
CltaO08585 Gm15042-201ENSMUST00000120212 883 ntBASIC42.48■■■■■ 4.39
CltaO08585 Gm15045-201ENSMUST00000117359 883 ntBASIC41.52■■■■■ 4.24
CltaO08585 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC41.32■■■■■ 4.21
CltaO08585 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC41.31■■■■■ 4.2
CltaO08585 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC41.12■■■■■ 4.17
CltaO08585 Gm23366-201ENSMUST00000175022 89 ntBASIC40.8■■■■■ 4.12
CltaO08585 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC40.6■■■■■ 4.09
CltaO08585 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC40.59■■■■■ 4.09
CltaO08585 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC40.05■■■■■ 4
CltaO08585 AC153911.1-202ENSMUST00000218534 1034 ntBASIC39.79■■■■□ 3.96
CltaO08585 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC39.68■■■■□ 3.94
CltaO08585 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC39.46■■■■□ 3.91
CltaO08585 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC39.35■■■■□ 3.89
CltaO08585 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC39.3■■■■□ 3.88
CltaO08585 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC39.28■■■■□ 3.88
CltaO08585 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC39.22■■■■□ 3.87
CltaO08585 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
CltaO08585 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC38.9■■■■□ 3.82
CltaO08585 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
CltaO08585 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC38.77■■■■□ 3.8
CltaO08585 Gm25238-201ENSMUST00000174914 89 ntBASIC38.73■■■■□ 3.79
CltaO08585 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC38.72■■■■□ 3.79
CltaO08585 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
CltaO08585 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC38.69■■■■□ 3.78
CltaO08585 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
CltaO08585 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
CltaO08585 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC38.3■■■■□ 3.72
CltaO08585 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC38.28■■■■□ 3.72
CltaO08585 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37.98■■■■□ 3.67
CltaO08585 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC37.89■■■■□ 3.66
CltaO08585 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37.8■■■■□ 3.64
CltaO08585 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
CltaO08585 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37.65■■■■□ 3.62
CltaO08585 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC37.57■■■■□ 3.6
CltaO08585 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
CltaO08585 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC37.49■■■■□ 3.59
CltaO08585 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37.46■■■■□ 3.59
CltaO08585 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC37.41■■■■□ 3.58
CltaO08585 Gm25262-201ENSMUST00000174934 133 ntBASIC37.19■■■■□ 3.54
CltaO08585 Gm27325-201ENSMUST00000175467 74 ntBASIC37.19■■■■□ 3.54
CltaO08585 Psd-208ENSMUST00000224556 2034 ntBASIC37.17■■■■□ 3.54
CltaO08585 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC37.16■■■■□ 3.54
CltaO08585 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC37.14■■■■□ 3.54
CltaO08585 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
CltaO08585 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.48
CltaO08585 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC36.76■■■■□ 3.48
CltaO08585 Rab21-202ENSMUST00000218831 843 ntBASIC36.67■■■■□ 3.46
CltaO08585 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC36.6■■■■□ 3.45
CltaO08585 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC36.6■■■■□ 3.45
CltaO08585 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC36.59■■■■□ 3.45
CltaO08585 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC36.52■■■■□ 3.44
CltaO08585 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC36.5■■■■□ 3.43
CltaO08585 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC36.48■■■■□ 3.43
CltaO08585 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC36.43■■■■□ 3.42
CltaO08585 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC36.42■■■■□ 3.42
CltaO08585 Gm26115-201ENSMUST00000175605 87 ntBASIC36.37■■■■□ 3.41
CltaO08585 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
CltaO08585 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
CltaO08585 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC36.28■■■■□ 3.4
CltaO08585 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC36.27■■■■□ 3.4
CltaO08585 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC36.25■■■■□ 3.39
CltaO08585 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC36.23■■■■□ 3.39
CltaO08585 Gm8109-201ENSMUST00000194076 746 ntBASIC36.18■■■■□ 3.38
CltaO08585 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
CltaO08585 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC36.16■■■■□ 3.38
CltaO08585 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC36.14■■■■□ 3.38
CltaO08585 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC36.11■■■■□ 3.37
CltaO08585 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
CltaO08585 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC36.01■■■■□ 3.36
CltaO08585 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35.99■■■■□ 3.35
CltaO08585 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
CltaO08585 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC35.94■■■■□ 3.34
CltaO08585 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
CltaO08585 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC35.84■■■■□ 3.33
CltaO08585 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
CltaO08585 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
CltaO08585 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC35.78■■■■□ 3.32
CltaO08585 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
CltaO08585 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC35.69■■■■□ 3.3
CltaO08585 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC35.65■■■■□ 3.3
CltaO08585 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC35.61■■■■□ 3.29
CltaO08585 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
CltaO08585 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC35.56■■■■□ 3.28
CltaO08585 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
CltaO08585 Gm17082-201ENSMUST00000166043 1091 ntBASIC35.41■■■■□ 3.26
CltaO08585 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC35.41■■■■□ 3.26
CltaO08585 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC35.4■■■■□ 3.26
CltaO08585 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
CltaO08585 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
CltaO08585 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC35.34■■■■□ 3.25
CltaO08585 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC35.33■■■■□ 3.25
CltaO08585 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
CltaO08585 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
CltaO08585 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
CltaO08585 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
CltaO08585 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms