Protein–RNA interactions for Protein: Q8R4P4

Tmc2, Transmembrane channel-like protein 2, mousemouse

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc2Q8R4P4 Gm25239-201ENSMUST00000174915 86 ntBASIC46.61■■■■■ 5.05
Tmc2Q8R4P4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42.98■■■■■ 4.47
Tmc2Q8R4P4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC42.38■■■■■ 4.37
Tmc2Q8R4P4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC41.23■■■■■ 4.19
Tmc2Q8R4P4 Gm15042-201ENSMUST00000120212 883 ntBASIC40.93■■■■■ 4.14
Tmc2Q8R4P4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC40.39■■■■■ 4.06
Tmc2Q8R4P4 Gm24109-201ENSMUST00000175489 103 ntBASIC40.33■■■■■ 4.05
Tmc2Q8R4P4 Gm15045-201ENSMUST00000117359 883 ntBASIC40.12■■■■■ 4.01
Tmc2Q8R4P4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC39.89■■■■□ 3.98
Tmc2Q8R4P4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC39.57■■■■□ 3.92
Tmc2Q8R4P4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC39.33■■■■□ 3.89
Tmc2Q8R4P4 Gm23366-201ENSMUST00000175022 89 ntBASIC38.92■■■■□ 3.82
Tmc2Q8R4P4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38.92■■■■□ 3.82
Tmc2Q8R4P4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC38.79■■■■□ 3.8
Tmc2Q8R4P4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
Tmc2Q8R4P4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC38.41■■■■□ 3.74
Tmc2Q8R4P4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
Tmc2Q8R4P4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC38.09■■■■□ 3.69
Tmc2Q8R4P4 Psd-208ENSMUST00000224556 2034 ntBASIC38.08■■■■□ 3.69
Tmc2Q8R4P4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
Tmc2Q8R4P4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37.96■■■■□ 3.67
Tmc2Q8R4P4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37.89■■■■□ 3.66
Tmc2Q8R4P4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC37.78■■■■□ 3.64
Tmc2Q8R4P4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC37.76■■■■□ 3.64
Tmc2Q8R4P4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37.69■■■■□ 3.62
Tmc2Q8R4P4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
Tmc2Q8R4P4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37.57■■■■□ 3.61
Tmc2Q8R4P4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37.55■■■■□ 3.6
Tmc2Q8R4P4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37.42■■■■□ 3.58
Tmc2Q8R4P4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC37.3■■■■□ 3.56
Tmc2Q8R4P4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC37.17■■■■□ 3.54
Tmc2Q8R4P4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
Tmc2Q8R4P4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36.94■■■■□ 3.5
Tmc2Q8R4P4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
Tmc2Q8R4P4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
Tmc2Q8R4P4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
Tmc2Q8R4P4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
Tmc2Q8R4P4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.48
Tmc2Q8R4P4 Gm25238-201ENSMUST00000174914 89 ntBASIC36.75■■■■□ 3.47
Tmc2Q8R4P4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC36.69■■■■□ 3.46
Tmc2Q8R4P4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36.62■■■■□ 3.45
Tmc2Q8R4P4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
Tmc2Q8R4P4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC36.24■■■■□ 3.39
Tmc2Q8R4P4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC36.22■■■■□ 3.39
Tmc2Q8R4P4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
Tmc2Q8R4P4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
Tmc2Q8R4P4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
Tmc2Q8R4P4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC36.01■■■■□ 3.36
Tmc2Q8R4P4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC35.99■■■■□ 3.35
Tmc2Q8R4P4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
Tmc2Q8R4P4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35.97■■■■□ 3.35
Tmc2Q8R4P4 Gm27325-201ENSMUST00000175467 74 ntBASIC35.95■■■■□ 3.35
Tmc2Q8R4P4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.33
Tmc2Q8R4P4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35.71■■■■□ 3.31
Tmc2Q8R4P4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
Tmc2Q8R4P4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35.62■■■■□ 3.29
Tmc2Q8R4P4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC35.56■■■■□ 3.28
Tmc2Q8R4P4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.27
Tmc2Q8R4P4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC35.48■■■■□ 3.27
Tmc2Q8R4P4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
Tmc2Q8R4P4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35.48■■■■□ 3.27
Tmc2Q8R4P4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC35.44■■■■□ 3.26
Tmc2Q8R4P4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35.42■■■■□ 3.26
Tmc2Q8R4P4 Gm10524-201ENSMUST00000181931 1893 ntBASIC35.42■■■■□ 3.26
Tmc2Q8R4P4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.26
Tmc2Q8R4P4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Tmc2Q8R4P4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
Tmc2Q8R4P4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
Tmc2Q8R4P4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC35.29■■■■□ 3.24
Tmc2Q8R4P4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Tmc2Q8R4P4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
Tmc2Q8R4P4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC35.23■■■■□ 3.23
Tmc2Q8R4P4 Gm25262-201ENSMUST00000174934 133 ntBASIC35.15■■■■□ 3.22
Tmc2Q8R4P4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC35.11■■■■□ 3.21
Tmc2Q8R4P4 Rab21-202ENSMUST00000218831 843 ntBASIC35.11■■■■□ 3.21
Tmc2Q8R4P4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
Tmc2Q8R4P4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC35.01■■■■□ 3.2
Tmc2Q8R4P4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC34.98■■■■□ 3.19
Tmc2Q8R4P4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34.97■■■■□ 3.19
Tmc2Q8R4P4 Gm42596-201ENSMUST00000196305 1958 ntBASIC34.94■■■■□ 3.18
Tmc2Q8R4P4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Tmc2Q8R4P4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Tmc2Q8R4P4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34.81■■■■□ 3.16
Tmc2Q8R4P4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
Tmc2Q8R4P4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC34.77■■■■□ 3.16
Tmc2Q8R4P4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC34.69■■■■□ 3.14
Tmc2Q8R4P4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Tmc2Q8R4P4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34.65■■■■□ 3.14
Tmc2Q8R4P4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Tmc2Q8R4P4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC34.62■■■■□ 3.13
Tmc2Q8R4P4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC34.61■■■■□ 3.13
Tmc2Q8R4P4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
Tmc2Q8R4P4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34.5■■■■□ 3.11
Tmc2Q8R4P4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34.45■■■■□ 3.11
Tmc2Q8R4P4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Tmc2Q8R4P4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC34.42■■■■□ 3.1
Tmc2Q8R4P4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
Tmc2Q8R4P4 Gm26115-201ENSMUST00000175605 87 ntBASIC34.39■■■■□ 3.1
Tmc2Q8R4P4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Tmc2Q8R4P4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms