Protein–RNA interactions for Protein: Q8R4P4

Tmc2, Transmembrane channel-like protein 2, mousemouse

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc2Q8R4P4 Gm25239-201ENSMUST00000174915 86 ntBASIC46,61■■■■■ 5,05
Tmc2Q8R4P4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42,98■■■■■ 4,47
Tmc2Q8R4P4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC42,38■■■■■ 4,37
Tmc2Q8R4P4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC41,23■■■■■ 4,19
Tmc2Q8R4P4 Gm15042-201ENSMUST00000120212 883 ntBASIC40,93■■■■■ 4,14
Tmc2Q8R4P4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC40,39■■■■■ 4,06
Tmc2Q8R4P4 Gm24109-201ENSMUST00000175489 103 ntBASIC40,33■■■■■ 4,05
Tmc2Q8R4P4 Gm15045-201ENSMUST00000117359 883 ntBASIC40,12■■■■■ 4,01
Tmc2Q8R4P4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC39,89■■■■□ 3,98
Tmc2Q8R4P4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC39,57■■■■□ 3,92
Tmc2Q8R4P4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC39,33■■■■□ 3,89
Tmc2Q8R4P4 Gm23366-201ENSMUST00000175022 89 ntBASIC38,92■■■■□ 3,82
Tmc2Q8R4P4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38,92■■■■□ 3,82
Tmc2Q8R4P4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC38,79■■■■□ 3,8
Tmc2Q8R4P4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38,73■■■■□ 3,79
Tmc2Q8R4P4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC38,41■■■■□ 3,74
Tmc2Q8R4P4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC38,2■■■■□ 3,71
Tmc2Q8R4P4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC38,09■■■■□ 3,69
Tmc2Q8R4P4 Psd-208ENSMUST00000224556 2034 ntBASIC38,08■■■■□ 3,69
Tmc2Q8R4P4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC37,99■■■■□ 3,67
Tmc2Q8R4P4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37,96■■■■□ 3,67
Tmc2Q8R4P4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37,89■■■■□ 3,66
Tmc2Q8R4P4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC37,78■■■■□ 3,64
Tmc2Q8R4P4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC37,76■■■■□ 3,64
Tmc2Q8R4P4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37,69■■■■□ 3,62
Tmc2Q8R4P4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37,64■■■■□ 3,62
Tmc2Q8R4P4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37,57■■■■□ 3,61
Tmc2Q8R4P4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37,55■■■■□ 3,6
Tmc2Q8R4P4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37,42■■■■□ 3,58
Tmc2Q8R4P4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC37,3■■■■□ 3,56
Tmc2Q8R4P4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC37,17■■■■□ 3,54
Tmc2Q8R4P4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC37,05■■■■□ 3,52
Tmc2Q8R4P4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36,94■■■■□ 3,5
Tmc2Q8R4P4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36,93■■■■□ 3,5
Tmc2Q8R4P4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36,88■■■■□ 3,49
Tmc2Q8R4P4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36,87■■■■□ 3,49
Tmc2Q8R4P4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36,86■■■■□ 3,49
Tmc2Q8R4P4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36,76■■■■□ 3,48
Tmc2Q8R4P4 Gm25238-201ENSMUST00000174914 89 ntBASIC36,75■■■■□ 3,47
Tmc2Q8R4P4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC36,69■■■■□ 3,46
Tmc2Q8R4P4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36,62■■■■□ 3,45
Tmc2Q8R4P4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC36,61■■■■□ 3,45
Tmc2Q8R4P4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC36,24■■■■□ 3,39
Tmc2Q8R4P4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC36,22■■■■□ 3,39
Tmc2Q8R4P4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC36,16■■■■□ 3,38
Tmc2Q8R4P4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC36,09■■■■□ 3,37
Tmc2Q8R4P4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC36,08■■■■□ 3,37
Tmc2Q8R4P4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC36,01■■■■□ 3,36
Tmc2Q8R4P4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC35,99■■■■□ 3,35
Tmc2Q8R4P4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC35,98■■■■□ 3,35
Tmc2Q8R4P4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35,97■■■■□ 3,35
Tmc2Q8R4P4 Gm27325-201ENSMUST00000175467 74 ntBASIC35,95■■■■□ 3,35
Tmc2Q8R4P4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35,82■■■■□ 3,33
Tmc2Q8R4P4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35,71■■■■□ 3,31
Tmc2Q8R4P4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35,63■■■■□ 3,29
Tmc2Q8R4P4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35,62■■■■□ 3,29
Tmc2Q8R4P4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC35,56■■■■□ 3,28
Tmc2Q8R4P4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC35,51■■■■□ 3,27
Tmc2Q8R4P4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC35,48■■■■□ 3,27
Tmc2Q8R4P4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35,48■■■■□ 3,27
Tmc2Q8R4P4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35,48■■■■□ 3,27
Tmc2Q8R4P4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC35,44■■■■□ 3,26
Tmc2Q8R4P4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35,42■■■■□ 3,26
Tmc2Q8R4P4 Gm10524-201ENSMUST00000181931 1893 ntBASIC35,42■■■■□ 3,26
Tmc2Q8R4P4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC35,38■■■■□ 3,26
Tmc2Q8R4P4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35,34■■■■□ 3,25
Tmc2Q8R4P4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC35,32■■■■□ 3,24
Tmc2Q8R4P4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC35,3■■■■□ 3,24
Tmc2Q8R4P4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC35,29■■■■□ 3,24
Tmc2Q8R4P4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC35,29■■■■□ 3,24
Tmc2Q8R4P4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35,28■■■■□ 3,24
Tmc2Q8R4P4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC35,23■■■■□ 3,23
Tmc2Q8R4P4 Gm25262-201ENSMUST00000174934 133 ntBASIC35,15■■■■□ 3,22
Tmc2Q8R4P4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC35,11■■■■□ 3,21
Tmc2Q8R4P4 Rab21-202ENSMUST00000218831 843 ntBASIC35,11■■■■□ 3,21
Tmc2Q8R4P4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC35,1■■■■□ 3,21
Tmc2Q8R4P4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC35,01■■■■□ 3,2
Tmc2Q8R4P4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC34,98■■■■□ 3,19
Tmc2Q8R4P4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34,97■■■■□ 3,19
Tmc2Q8R4P4 Gm42596-201ENSMUST00000196305 1958 ntBASIC34,94■■■■□ 3,18
Tmc2Q8R4P4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC34,93■■■■□ 3,18
Tmc2Q8R4P4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC34,92■■■■□ 3,18
Tmc2Q8R4P4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34,81■■■■□ 3,16
Tmc2Q8R4P4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34,77■■■■□ 3,16
Tmc2Q8R4P4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC34,77■■■■□ 3,16
Tmc2Q8R4P4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC34,69■■■■□ 3,14
Tmc2Q8R4P4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34,65■■■■□ 3,14
Tmc2Q8R4P4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34,65■■■■□ 3,14
Tmc2Q8R4P4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34,65■■■■□ 3,14
Tmc2Q8R4P4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC34,62■■■■□ 3,13
Tmc2Q8R4P4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC34,61■■■■□ 3,13
Tmc2Q8R4P4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34,59■■■■□ 3,13
Tmc2Q8R4P4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34,5■■■■□ 3,11
Tmc2Q8R4P4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34,45■■■■□ 3,11
Tmc2Q8R4P4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC34,44■■■■□ 3,1
Tmc2Q8R4P4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC34,42■■■■□ 3,1
Tmc2Q8R4P4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34,41■■■■□ 3,1
Tmc2Q8R4P4 Gm26115-201ENSMUST00000175605 87 ntBASIC34,39■■■■□ 3,1
Tmc2Q8R4P4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC34,38■■■■□ 3,09
Tmc2Q8R4P4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC34,33■■■■□ 3,09
Retrieved 100 of 76,532 protein–RNA pairs in 9,6 ms