RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Q3UPC7 1272 aa18.68■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Ltv1Q6NSQ7 470 aaKnown RBP18.68■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Nap1l4Q78ZA7 375 aaKnown RBP18.68■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Peg3Q3URU2 1571 aa18.68■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Lrriq1Q0P5X1 1673 aa18.68■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Cnot6lQ8VEG6 555 aa18.68■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 BrapQ99MP8 591 aa18.68■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Cyp4f39Q8BGU0 532 aa18.68■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Chd1lQ9CXF7 900 aa18.68■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Actn2Q9JI91 894 aa18.68■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Eftud2O08810 971 aaKnown RBP18.67■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Snx13Q6PHS6 957 aa18.67■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Q9D5Q8 446 aa18.67■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Calml3Q9D6P8 149 aa18.67■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Plcb1Q9Z1B3 1216 aa18.67■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Sos2Q02384 1333 aa18.67■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Aldh8a1Q8BH00 487 aa18.67■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Aox1O54754 1333 aa18.67■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Znf18Q810A1 556 aa18.67■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Lonp1Q8CGK3 949 aaKnown RBP18.67■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Sept3Q9Z1S5 350 aa18.67■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Ublcp1Q8BGR9 318 aa18.67■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 MarcksP26645 309 aaKnown RBP18.66■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Atxn3Q9CVD2 355 aa18.66■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Pde3aQ9Z0X4 1141 aa18.66■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Atf7ipQ7TT18 1306 aa18.66■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 SsbP32067 415 aaKnown RBP18.66■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Cfap74Q3UY96 1578 aa18.66■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Grpel1Q99LP6 217 aa18.66■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Krt13P08730 437 aa18.66■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Arl1P61211 181 aa18.66■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Idi2Q8BFZ6 227 aa18.66■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Irx4Q9QY61 515 aa18.66■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Akr1b8P45377 316 aa18.66■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Ift20Q61025 132 aa18.66■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Asic3Q6X1Y6 530 aa18.66■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Palm3A2TJV2 734 aa18.66■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Slc14a2Q8R4T9 930 aa18.66■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Il1rapl2Q9ERS6 686 aa18.66■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Tldc2A2ACG1 198 aa18.66■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Ccdc89Q9DA73 370 aa18.66■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Talpid3E9PV87 1520 aa18.65■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Rbbp8nlA2ABX0 614 aa18.65■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Sun3Q5SS91 320 aa18.65■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Trim6Q8BGE7 488 aa18.65■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Clasp2Q8BRT1 1286 aaKnown RBP18.65■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Vps41Q5KU39 853 aa18.65■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 NsmfQ99NF2 532 aa18.65■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Zkscan4Q5SZT6 480 aa18.65■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 KaznQ69ZS8 779 aa18.65■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Kdm1aQ6ZQ88 853 aa18.65■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Stoml1Q8CI66 399 aa18.65■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Mis12Q9CY25 206 aa18.65■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Amotl1Q9D4H4 968 aa18.65■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Bfsp1A2AMT1 669 aa18.64■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Kiaa1328Q6NZK5 612 aa18.64■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Ctdp1Q7TSG2 960 aa18.64■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Actr5Q80US4 605 aaKnown RBP18.64■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Diaph2O70566 1098 aa18.64■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 RarsQ9D0I9 660 aaKnown RBP18.64■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Depdc1bQ8BH88 529 aa18.64■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Lmod1Q8BVA4 595 aa18.64■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Rdm1Q9CQK3 281 aa18.64■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Rfwd2Q9R1A8 733 aaKnown RBP18.64■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Sclt1G5E861 688 aa18.64■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Rbm26Q6NZN0 1012 aaKnown RBP18.64■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Xrcc4Q924T3 326 aa18.64■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Trpc3Q9QZC1 836 aa18.64■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Mapkbp1Q6NS57 1503 aa18.64■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Cct6bQ61390 531 aa18.64■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Serpina10Q8R121 448 aa18.64■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Atp1a4Q9WV27 1032 aa18.64■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Lcmt1A0A0U1RNF2 332 aa18.64■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Ranbp6Q8BIV3 1105 aa18.63■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Naa25Q8BWZ3 972 aa18.63■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Rtn1Q8K0T0 780 aa18.63■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Sh2b1Q91ZM2 756 aa18.63■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 St5Q924W7 1134 aa18.63■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 4930548H24RikQ9D496 437 aa18.63■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Ccpg1Q640L3 753 aa18.63■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Ankrd24Q80VM7 985 aa18.63■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Mroh7A2AVR2 1279 aa18.63■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Snx25Q3ZT31 840 aa18.63■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Naip5Q9R016 1403 aa18.63■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 EnahQ03173 802 aa18.63■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Afap1Q80YS6 731 aa18.63■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Tpcn1Q9EQJ0 817 aa18.63■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 S100bP50114 92 aa18.63■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Speer2E9Q9U2 264 aa18.62■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Tcerg1lQ3B807 590 aa18.62■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Lrrc43Q3V0L5 667 aa18.62■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 InsrP15208 1372 aa18.62■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 IqcdQ9D3V1 458 aa18.62■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 VeztQ3ZK22 780 aa18.62■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Mcm5P49718 733 aa18.62■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Pola1P33609 1465 aa18.62■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Znf365Q8BG89 408 aa18.62■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Bicdl2Q8CHW5 507 aa18.62■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Krt90E9Q1Z0 538 aa18.62■□□□□ 0.57
Ccdc88a-201ENSMUST00000040182 Ifih1Q8R5F7 1025 aa18.62■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 35.3 ms