Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Gm25239-201ENSMUST00000174915 86 ntBASIC40.06■■■■■ 4
Depdc1bQ8BH88 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.05■■■■□ 3.52
Depdc1bQ8BH88 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
Depdc1bQ8BH88 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
Depdc1bQ8BH88 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
Depdc1bQ8BH88 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.56■■■■□ 3.28
Depdc1bQ8BH88 Gm15042-201ENSMUST00000120212 883 ntBASIC34.98■■■■□ 3.19
Depdc1bQ8BH88 Gm24109-201ENSMUST00000175489 103 ntBASIC34.71■■■■□ 3.15
Depdc1bQ8BH88 Psd-208ENSMUST00000224556 2034 ntBASIC34.25■■■■□ 3.07
Depdc1bQ8BH88 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Depdc1bQ8BH88 Gm15045-201ENSMUST00000117359 883 ntBASIC34.17■■■■□ 3.06
Depdc1bQ8BH88 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
Depdc1bQ8BH88 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.83■■■■□ 3.01
Depdc1bQ8BH88 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
Depdc1bQ8BH88 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.63■■■□□ 2.97
Depdc1bQ8BH88 Gm23366-201ENSMUST00000175022 89 ntBASIC33.49■■■□□ 2.95
Depdc1bQ8BH88 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.94
Depdc1bQ8BH88 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.43■■■□□ 2.94
Depdc1bQ8BH88 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Depdc1bQ8BH88 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Depdc1bQ8BH88 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Depdc1bQ8BH88 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Depdc1bQ8BH88 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
Depdc1bQ8BH88 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Depdc1bQ8BH88 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
Depdc1bQ8BH88 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
Depdc1bQ8BH88 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
Depdc1bQ8BH88 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Depdc1bQ8BH88 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Depdc1bQ8BH88 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.6■■■□□ 2.81
Depdc1bQ8BH88 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.5■■■□□ 2.79
Depdc1bQ8BH88 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.38■■■□□ 2.77
Depdc1bQ8BH88 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Depdc1bQ8BH88 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
Depdc1bQ8BH88 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
Depdc1bQ8BH88 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Depdc1bQ8BH88 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.21■■■□□ 2.75
Depdc1bQ8BH88 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.15■■■□□ 2.74
Depdc1bQ8BH88 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.08■■■□□ 2.73
Depdc1bQ8BH88 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Depdc1bQ8BH88 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Depdc1bQ8BH88 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Depdc1bQ8BH88 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Depdc1bQ8BH88 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Depdc1bQ8BH88 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Depdc1bQ8BH88 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Depdc1bQ8BH88 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.68■■■□□ 2.66
Depdc1bQ8BH88 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.65■■■□□ 2.66
Depdc1bQ8BH88 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Depdc1bQ8BH88 Gm25238-201ENSMUST00000174914 89 ntBASIC31.61■■■□□ 2.65
Depdc1bQ8BH88 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Depdc1bQ8BH88 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.49■■■□□ 2.63
Depdc1bQ8BH88 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.43■■■□□ 2.62
Depdc1bQ8BH88 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Depdc1bQ8BH88 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Depdc1bQ8BH88 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
Depdc1bQ8BH88 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.26■■■□□ 2.6
Depdc1bQ8BH88 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
Depdc1bQ8BH88 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.09■■■□□ 2.57
Depdc1bQ8BH88 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Depdc1bQ8BH88 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Depdc1bQ8BH88 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Depdc1bQ8BH88 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.85■■■□□ 2.53
Depdc1bQ8BH88 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Depdc1bQ8BH88 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Depdc1bQ8BH88 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Depdc1bQ8BH88 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.73■■■□□ 2.51
Depdc1bQ8BH88 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Depdc1bQ8BH88 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.71■■■□□ 2.51
Depdc1bQ8BH88 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
Depdc1bQ8BH88 Gm27325-201ENSMUST00000175467 74 ntBASIC30.66■■■□□ 2.5
Depdc1bQ8BH88 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.5
Depdc1bQ8BH88 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.59■■■□□ 2.49
Depdc1bQ8BH88 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Depdc1bQ8BH88 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.56■■■□□ 2.48
Depdc1bQ8BH88 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
Depdc1bQ8BH88 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.55■■■□□ 2.48
Depdc1bQ8BH88 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Depdc1bQ8BH88 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.5■■■□□ 2.47
Depdc1bQ8BH88 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.42■■■□□ 2.46
Depdc1bQ8BH88 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Depdc1bQ8BH88 Gm25262-201ENSMUST00000174934 133 ntBASIC30.36■■■□□ 2.45
Depdc1bQ8BH88 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Depdc1bQ8BH88 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Depdc1bQ8BH88 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Depdc1bQ8BH88 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
Depdc1bQ8BH88 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
Depdc1bQ8BH88 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Depdc1bQ8BH88 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Depdc1bQ8BH88 Rab21-202ENSMUST00000218831 843 ntBASIC30.14■■■□□ 2.42
Depdc1bQ8BH88 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Depdc1bQ8BH88 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Depdc1bQ8BH88 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Depdc1bQ8BH88 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.05■■■□□ 2.4
Depdc1bQ8BH88 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Depdc1bQ8BH88 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Depdc1bQ8BH88 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Depdc1bQ8BH88 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.93■■■□□ 2.38
Depdc1bQ8BH88 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Depdc1bQ8BH88 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms