RNA–Protein interactions for RNA: YPR101W

SNT309, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SNT309, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNT309	YPR101W	KIP2	P28743	706 aa		7.29	□□□□□ -1.24
SNT309	YPR101W	VPS35	P34110	944 aa		7.29	□□□□□ -1.24
SNT309	YPR101W	YBL055C	P34220	418 aa	Predicted RBP	7.29	□□□□□ -1.24
SNT309	YPR101W	VHC1	P38329	1120 aa		7.29	□□□□□ -1.24
SNT309	YPR101W	PMC1	P38929	1173 aa	Predicted RBP	7.29	□□□□□ -1.24
SNT309	YPR101W	VPS53	P47061	822 aa		7.29	□□□□□ -1.24
SNT309	YPR101W	VPS4	P52917	437 aa		7.29	□□□□□ -1.24
SNT309	YPR101W	TFB2	Q02939	513 aa		7.29	□□□□□ -1.24
SNT309	YPR101W	YPL109C	Q02981	657 aa		7.29	□□□□□ -1.24
SNT309	YPR101W	SHE9	Q04172	456 aa		7.29	□□□□□ -1.24
SNT309	YPR101W	LCB5	Q06147	687 aa	Known RBP	7.29	□□□□□ -1.24
SNT309	YPR101W	TUB2	P02557	457 aa	Known RBP	7.28	□□□□□ -1.24
SNT309	YPR101W	ILV2	P07342	687 aa	Known RBP	7.28	□□□□□ -1.24
SNT309	YPR101W	YML002W	P0CF17	737 aa		7.28	□□□□□ -1.24
SNT309	YPR101W	SFL1	P20134	766 aa		7.28	□□□□□ -1.24
SNT309	YPR101W	MRPL25	P23369	157 aa		7.28	□□□□□ -1.24
SNT309	YPR101W	MVD1	P32377	396 aa	Known RBP	7.28	□□□□□ -1.24
SNT309	YPR101W	NCL1	P38205	684 aa	Known RBP	7.28	□□□□□ -1.24
SNT309	YPR101W	UTP7	P40055	554 aa	Known RBP	7.28	□□□□□ -1.24
SNT309	YPR101W	FIS1	P40515	155 aa		7.28	□□□□□ -1.24
SNT309	YPR101W	MTC3	P53077	123 aa		7.28	□□□□□ -1.24
SNT309	YPR101W	LIF1	P53150	421 aa		7.28	□□□□□ -1.24
SNT309	YPR101W	ARK1	P53974	638 aa		7.28	□□□□□ -1.24
SNT309	YPR101W	TDA5	Q06417	326 aa	Known RBP	7.28	□□□□□ -1.24
SNT309	YPR101W	ACM1	Q08981	209 aa		7.28	□□□□□ -1.24
SNT309	YPR101W	RPS3	P05750	240 aa	Known RBP	7.27	□□□□□ -1.25
SNT309	YPR101W	RAD3	P06839	778 aa		7.27	□□□□□ -1.25
SNT309	YPR101W	GCR1	P07261	785 aa		7.27	□□□□□ -1.25
SNT309	YPR101W	ERG12	P07277	443 aa		7.27	□□□□□ -1.25
SNT309	YPR101W	YMR085W	P0CF18	432 aa		7.27	□□□□□ -1.25
SNT309	YPR101W	PMS1	P14242	873 aa		7.27	□□□□□ -1.25
SNT309	YPR101W	HEM15	P16622	393 aa		7.27	□□□□□ -1.25
SNT309	YPR101W	DBP5	P20449	482 aa	Known RBP	7.27	□□□□□ -1.25
SNT309	YPR101W	BAS1	P22035	811 aa		7.27	□□□□□ -1.25
SNT309	YPR101W	VAN1	P23642	535 aa		7.27	□□□□□ -1.25
SNT309	YPR101W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	7.27	□□□□□ -1.25	RIP-Chip
SNT309	YPR101W	TRM2	P33753	639 aa		7.27	□□□□□ -1.25
SNT309	YPR101W	STE13	P33894	931 aa		7.27	□□□□□ -1.25
SNT309	YPR101W	UBP11	P36026	717 aa		7.27	□□□□□ -1.25
SNT309	YPR101W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	7.27	□□□□□ -1.25	not detected
SNT309	YPR101W	YBL086C	P38177	466 aa		7.27	□□□□□ -1.25
SNT309	YPR101W	PHO88	P38264	188 aa	Predicted RBP	7.27	□□□□□ -1.25
SNT309	YPR101W	YMR134W	P40207	237 aa		7.27	□□□□□ -1.25
SNT309	YPR101W	ATG36	P46983	293 aa		7.27	□□□□□ -1.25
SNT309	YPR101W	ZIP2	P53061	704 aa		7.27	□□□□□ -1.25
SNT309	YPR101W	ATG1	P53104	897 aa		7.27	□□□□□ -1.25
SNT309	YPR101W	YDR222W	Q04925	415 aa		7.27	□□□□□ -1.25
SNT309	YPR101W	YDR278C	Q05612	105 aa		7.27	□□□□□ -1.25
SNT309	YPR101W	GNT1	Q12096	491 aa		7.27	□□□□□ -1.25
SNT309	YPR101W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	7.26	□□□□□ -1.25	not detected
SNT309	YPR101W	RPS9B	P05755	195 aa	Known RBP	7.26	□□□□□ -1.25
SNT309	YPR101W	SPT2	P06843	333 aa	Predicted RBP	7.26	□□□□□ -1.25
SNT309	YPR101W	MRPS28	P21771	286 aa		7.26	□□□□□ -1.25
SNT309	YPR101W	VMA4	P22203	233 aa	Known RBP	7.26	□□□□□ -1.25
SNT309	YPR101W	ICL1	P28240	557 aa	Predicted RBP	7.26	□□□□□ -1.25
SNT309	YPR101W	MUD1	P32605	298 aa	Known RBP	7.26	□□□□□ -1.25
SNT309	YPR101W	SET3	P36124	751 aa		7.26	□□□□□ -1.25
SNT309	YPR101W	CCL1	P37366	393 aa		7.26	□□□□□ -1.25
SNT309	YPR101W	YBR032W	P38223	100 aa		7.26	□□□□□ -1.25
SNT309	YPR101W	POP4	P38336	279 aa		7.26	□□□□□ -1.25
SNT309	YPR101W	HSM3	P38348	480 aa		7.26	□□□□□ -1.25
SNT309	YPR101W	SIP5	P40210	489 aa	Known RBP	7.26	□□□□□ -1.25
SNT309	YPR101W	YJR142W	P47173	342 aa		7.26	□□□□□ -1.25
SNT309	YPR101W	CLA4	P48562	842 aa		7.26	□□□□□ -1.25
SNT309	YPR101W	HOT1	Q03213	719 aa		7.26	□□□□□ -1.25
SNT309	YPR101W	ALR1	Q08269	859 aa		7.26	□□□□□ -1.25
SNT309	YPR101W	GPN2	Q08726	347 aa	Predicted RBP	7.26	□□□□□ -1.25
SNT309	YPR101W	CDC53	Q12018	815 aa	Known RBP	7.26	□□□□□ -1.25
SNT309	YPR101W	ISU2	Q12056	156 aa		7.26	□□□□□ -1.25
SNT309	YPR101W	CTT1	P06115	562 aa		7.25	□□□□□ -1.25
SNT309	YPR101W	ADE3	P07245	946 aa	Known RBP	7.25	□□□□□ -1.25
SNT309	YPR101W	IME1	P21190	360 aa		7.25	□□□□□ -1.25
SNT309	YPR101W	BUD14	P27637	709 aa		7.25	□□□□□ -1.25
SNT309	YPR101W	GLN1	P32288	370 aa	Known RBP	7.25	□□□□□ -1.25
SNT309	YPR101W	CDC11	P32458	415 aa		7.25	□□□□□ -1.25
SNT309	YPR101W	RRN6	P32786	894 aa		7.25	□□□□□ -1.25
SNT309	YPR101W	MRE11	P32829	692 aa		7.25	□□□□□ -1.25
SNT309	YPR101W	FZO1	P38297	855 aa		7.25	□□□□□ -1.25
SNT309	YPR101W	VHR2	P40041	505 aa		7.25	□□□□□ -1.25
SNT309	YPR101W	ASG1	P40467	964 aa		7.25	□□□□□ -1.25
SNT309	YPR101W	YIL001W	P40560	513 aa		7.25	□□□□□ -1.25
SNT309	YPR101W	AXL1	P40851	1208 aa		7.25	□□□□□ -1.25
SNT309	YPR101W	MDJ2	P42834	146 aa		7.25	□□□□□ -1.25
SNT309	YPR101W	EMW1	P42842	904 aa	Known RBP	7.25	□□□□□ -1.25
SNT309	YPR101W	NNF2	P53253	936 aa		7.25	□□□□□ -1.25
SNT309	YPR101W	YMR027W	Q04371	470 aa		7.25	□□□□□ -1.25
SNT309	YPR101W	UFO1	Q04511	668 aa		7.25	□□□□□ -1.25
SNT309	YPR101W	GUD1	Q07729	489 aa		7.25	□□□□□ -1.25
SNT309	YPR101W	SLX4	Q12098	748 aa		7.25	□□□□□ -1.25
SNT309	YPR101W	RIB2	Q12362	591 aa	Known RBP	7.25	□□□□□ -1.25
SNT309	YPR101W	THS1	P04801	734 aa	Known RBP	7.24	□□□□□ -1.25
SNT309	YPR101W	PDR1	P12383	1068 aa		7.24	□□□□□ -1.25
SNT309	YPR101W	CBF1	P17106	351 aa		7.24	□□□□□ -1.25
SNT309	YPR101W	PWP1	P21304	576 aa	Known RBP	7.24	□□□□□ -1.25
SNT309	YPR101W	GPI10	P30777	616 aa		7.24	□□□□□ -1.25
SNT309	YPR101W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	7.24	□□□□□ -1.25	not detected
SNT309	YPR101W	PCA1	P38360	1216 aa		7.24	□□□□□ -1.25
SNT309	YPR101W	SPC97	P38863	823 aa		7.24	□□□□□ -1.25
SNT309	YPR101W	SHC1	P39000	512 aa		7.24	□□□□□ -1.25
SNT309	YPR101W	NPP2	P39997	493 aa		7.24	□□□□□ -1.25

Retrieved 100 of 5,963 RNA–protein pairs in 74.4 ms