RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SQS1	YNL224C	KTR1	P27810	393 aa	Known RBP	3.48	□□□□□ -1.85
SQS1	YNL224C	MGM1	P32266	881 aa		3.48	□□□□□ -1.85
SQS1	YNL224C	RPN2	P32565	945 aa	Known RBP	3.48	□□□□□ -1.85
SQS1	YNL224C	MRP4	P32902	394 aa		3.48	□□□□□ -1.85
SQS1	YNL224C	VPS17	P32913	551 aa		3.48	□□□□□ -1.85
SQS1	YNL224C	RPT1	P33299	467 aa	Known RBP	3.48	□□□□□ -1.85
SQS1	YNL224C	PCH2	P38126	564 aa		3.48	□□□□□ -1.85
SQS1	YNL224C	RTC3	P38804	111 aa	Predicted RBP	3.48	□□□□□ -1.85
SQS1	YNL224C	DSS1	P39112	969 aa		3.48	□□□□□ -1.85
SQS1	YNL224C	RVS167	P39743	482 aa	Known RBP	3.48	□□□□□ -1.85
SQS1	YNL224C	BUD16	P39988	312 aa		3.48	□□□□□ -1.85
SQS1	YNL224C	YTA12	P40341	825 aa		3.48	□□□□□ -1.85
SQS1	YNL224C	DUG1	P43616	481 aa	Known RBP	3.48	□□□□□ -1.85
SQS1	YNL224C	VPS53	P47061	822 aa		3.48	□□□□□ -1.85
SQS1	YNL224C	VMA10	P48836	114 aa	Known RBP	3.48	□□□□□ -1.85
SQS1	YNL224C	STB4	P50104	949 aa		3.48	□□□□□ -1.85
SQS1	YNL224C	MNT2	P53059	558 aa		3.48	□□□□□ -1.85
SQS1	YNL224C	YGL117W	P53133	265 aa		3.48	□□□□□ -1.85
SQS1	YNL224C	MEP3	P53390	489 aa		3.48	□□□□□ -1.85
SQS1	YNL224C	RET3	P53600	189 aa		3.48	□□□□□ -1.85
SQS1	YNL224C	YNR068C	P53754	272 aa		3.48	□□□□□ -1.85
SQS1	YNL224C	KRE33	P53914	1056 aa	Known RBP	3.48	□□□□□ -1.85
SQS1	YNL224C	ESBP6	P53918	673 aa		3.48	□□□□□ -1.85
SQS1	YNL224C	SSL2	Q00578	843 aa		3.48	□□□□□ -1.85
SQS1	YNL224C	YML108W	Q03759	105 aa		3.48	□□□□□ -1.85
SQS1	YNL224C	YDR131C	Q03899	556 aa		3.48	□□□□□ -1.85
SQS1	YNL224C	SPC19	Q03954	165 aa		3.48	□□□□□ -1.85
SQS1	YNL224C	RRP17	Q04031	235 aa	Predicted RBP	3.48	□□□□□ -1.85
SQS1	YNL224C	ARA2	Q04212	335 aa		3.48	□□□□□ -1.85
SQS1	YNL224C	RTT103	Q05543	409 aa		3.48	□□□□□ -1.85
SQS1	YNL224C	RTT10	Q08924	1013 aa		3.48	□□□□□ -1.85
SQS1	YNL224C	GUP2	Q08929	609 aa		3.48	□□□□□ -1.85
SQS1	YNL224C	ADR1	P07248	1323 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	ADE2	P21264	571 aa	Known RBP	3.47	□□□□□ -1.85
SQS1	YNL224C	NPR1	P22211	790 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	SEC21	P32074	935 aa	Known RBP	3.47	□□□□□ -1.85
SQS1	YNL224C	DBF20	P32328	564 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	HMX1	P32339	317 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	NIP1	P32497	812 aa	Known RBP	3.47	□□□□□ -1.85
SQS1	YNL224C	RGD1	P38339	666 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	UTP9	P38882	575 aa	Known RBP	3.47	□□□□□ -1.85
SQS1	YNL224C	MNL1	P38888	796 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	ULP2	P40537	1034 aa	Predicted RBP	3.47	□□□□□ -1.85
SQS1	YNL224C	HAM1	P47119	197 aa	Known RBP	3.47	□□□□□ -1.85
SQS1	YNL224C	MET14	Q02196	202 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	TBF1	Q02457	562 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	IRC4	Q03036	179 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	SPR28	Q04921	423 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	SML1	Q04964	104 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	NOP12	Q08208	459 aa	Known RBP	3.47	□□□□□ -1.85
SQS1	YNL224C	GYP1	Q08484	637 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	CHS5	Q12114	671 aa	Known RBP	3.47	□□□□□ -1.85
SQS1	YNL224C	SCM3	Q12334	223 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	SKM1	Q12469	655 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	CDC37	P06101	506 aa	Known RBP	3.47	□□□□□ -1.85
SQS1	YNL224C	CYT1	P07143	309 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	ERR1	P0CX10	437 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	ERR2	P0CX11	437 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	RPS24A	P0CX31	135 aa	Known RBP	3.47	□□□□□ -1.85
SQS1	YNL224C	RPS24B	P0CX32	135 aa	Known RBP	3.47	□□□□□ -1.85
SQS1	YNL224C	PHO8	P11491	566 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	KAR2	P16474	682 aa	Known RBP	3.47	□□□□□ -1.85
SQS1	YNL224C	THR1	P17423	357 aa	Known RBP	3.47	□□□□□ -1.85
SQS1	YNL224C	GRX1	P25373	110 aa	Known RBP	3.47	□□□□□ -1.85
SQS1	YNL224C	PEP7	P32609	515 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	SQT1	P35184	431 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	PHO11	P35842	467 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	PHO12	P38693	467 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	GND1	P38720	489 aa	Known RBP	3.47	□□□□□ -1.85
SQS1	YNL224C	LSM5	P40089	93 aa	Known RBP	3.47	□□□□□ -1.85
SQS1	YNL224C	LTP1	P40347	161 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	QRI1	P43123	477 aa	Known RBP	3.47	□□□□□ -1.85
SQS1	YNL224C	MDV1	P47025	714 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	MAD3	P47074	515 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	PSD2	P53037	1138 aa	Known RBP	3.47	□□□□□ -1.85
SQS1	YNL224C	YGR127W	P53275	312 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	COP1	P53622	1201 aa	Known RBP	3.47	□□□□□ -1.85
SQS1	YNL224C	TOF2	Q02208	771 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	ABZ2	Q03266	374 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	PKH3	Q03306	898 aa	Predicted RBP	3.47	□□□□□ -1.85
SQS1	YNL224C	RPN9	Q04062	393 aa	Known RBP	3.47	□□□□□ -1.85
SQS1	YNL224C	RTN1	Q04947	295 aa	Known RBP	3.47	□□□□□ -1.85
SQS1	YNL224C	YLR287C	Q05881	355 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	YCS4	Q06156	1176 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	ATG13	Q06628	738 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	MRL1	Q06815	381 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	CMS1	Q07897	291 aa	Known RBP	3.47	□□□□□ -1.85
SQS1	YNL224C	SFI1	Q12369	946 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	SRF1	Q12516	437 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	YOR019W	Q99248	730 aa		3.47	□□□□□ -1.85
SQS1	YNL224C	KSS1	P14681	368 aa		3.46	□□□□□ -1.86
SQS1	YNL224C	MSD1	P15179	658 aa	Known RBP	3.46	□□□□□ -1.86
SQS1	YNL224C	PWP1	P21304	576 aa	Known RBP	3.46	□□□□□ -1.86
SQS1	YNL224C	APA2	P22108	325 aa		3.46	□□□□□ -1.86
SQS1	YNL224C	MRPL8	P22353	238 aa		3.46	□□□□□ -1.86
SQS1	YNL224C	PRP28	P23394	588 aa		3.46	□□□□□ -1.86
SQS1	YNL224C	CAD1	P24813	409 aa	Known RBP	3.46	□□□□□ -1.86
SQS1	YNL224C	SED4	P25365	1065 aa		3.46	□□□□□ -1.86
SQS1	YNL224C	KRE2	P27809	442 aa		3.46	□□□□□ -1.86
SQS1	YNL224C	CHS3	P29465	1165 aa		3.46	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 57.9 ms