RNA–Protein interactions for RNA: YKL164C

PIR1, Transcript of O-glycosylated protein required for cell wall stability, yeast

Gene PIR1, Length 1,026 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIR1	YKL164C	ECL1	P48235	211 aa		4.21	□□□□□ -1.74
PIR1	YKL164C	MET13	P53128	600 aa		4.21	□□□□□ -1.74
PIR1	YKL164C	YGL081W	P53156	320 aa		4.21	□□□□□ -1.74
PIR1	YKL164C	GTF1	P53260	183 aa	Predicted RBP	4.21	□□□□□ -1.74
PIR1	YKL164C	VPS62	P53285	467 aa		4.21	□□□□□ -1.74
PIR1	YKL164C	SNP1	Q00916	300 aa	Predicted RBP	4.21	□□□□□ -1.74
PIR1	YKL164C	THI21	Q08975	551 aa		4.21	□□□□□ -1.74
PIR1	YKL164C	HAL9	Q12180	1030 aa		4.21	□□□□□ -1.74
PIR1	YKL164C	MLP1	Q02455	1875 aa	Known RBP	4.2	□□□□□ -1.74
PIR1	YKL164C	RPS9A	O13516	197 aa	Known RBP	4.2	□□□□□ -1.74
PIR1	YKL164C	HMG1	P12683	1054 aa		4.2	□□□□□ -1.74
PIR1	YKL164C	SFL1	P20134	766 aa		4.2	□□□□□ -1.74
PIR1	YKL164C	TSR4	P25040	408 aa		4.2	□□□□□ -1.74
PIR1	YKL164C	YEL1	P34225	687 aa		4.2	□□□□□ -1.74
PIR1	YKL164C	ESL2	P36168	1195 aa		4.2	□□□□□ -1.74
PIR1	YKL164C	POA1	P38218	177 aa		4.2	□□□□□ -1.74
PIR1	YKL164C	PCM1	P38628	557 aa	Known RBP	4.2	□□□□□ -1.74
PIR1	YKL164C	YIL108W	P40483	696 aa	Known RBP	4.2	□□□□□ -1.74
PIR1	YKL164C	URM1	P40554	99 aa	Predicted RBP	4.2	□□□□□ -1.74
PIR1	YKL164C	MET12	P46151	657 aa		4.2	□□□□□ -1.74
PIR1	YKL164C	ALY2	P47029	1046 aa		4.2	□□□□□ -1.74
PIR1	YKL164C	GPG1	P53130	126 aa		4.2	□□□□□ -1.74
PIR1	YKL164C	GCN5	Q03330	439 aa		4.2	□□□□□ -1.74
PIR1	YKL164C	IOC4	Q04213	475 aa		4.2	□□□□□ -1.74
PIR1	YKL164C	ATG33	Q06485	197 aa		4.2	□□□□□ -1.74
PIR1	YKL164C	CDA2	Q06703	312 aa		4.2	□□□□□ -1.74
PIR1	YKL164C	THI73	Q07904	523 aa		4.2	□□□□□ -1.74
PIR1	YKL164C	HMI1	Q12039	706 aa		4.2	□□□□□ -1.74
PIR1	YKL164C	UPC2	Q12151	913 aa		4.2	□□□□□ -1.74
PIR1	YKL164C	YOR022C	Q12204	715 aa		4.2	□□□□□ -1.74
PIR1	YKL164C	HOG1	P32485	435 aa		4.19	□□□□□ -1.74
PIR1	YKL164C	YEN1	P40028	759 aa		4.19	□□□□□ -1.74
PIR1	YKL164C	CHA4	P43634	648 aa		4.19	□□□□□ -1.74
PIR1	YKL164C	HLJ1	P48353	224 aa		4.19	□□□□□ -1.74
PIR1	YKL164C	PSP2	P50109	593 aa	Known RBP	4.19	□□□□□ -1.74
PIR1	YKL164C	AIM14	P53109	570 aa		4.19	□□□□□ -1.74
PIR1	YKL164C	DUS1	P53759	423 aa	Known RBP	4.19	□□□□□ -1.74
PIR1	YKL164C	VPS30	Q02948	557 aa		4.19	□□□□□ -1.74
PIR1	YKL164C	GPB1	Q08886	897 aa		4.19	□□□□□ -1.74
PIR1	YKL164C	HIS5	P07172	385 aa		4.18	□□□□□ -1.74
PIR1	YKL164C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
PIR1	YKL164C	EMC1	P25574	760 aa		4.18	□□□□□ -1.74
PIR1	YKL164C	CDC20	P26309	610 aa		4.18	□□□□□ -1.74
PIR1	YKL164C	CTF8	P38877	133 aa		4.18	□□□□□ -1.74
PIR1	YKL164C	SET5	P38890	526 aa	Known RBP	4.18	□□□□□ -1.74
PIR1	YKL164C	SDP1	P40479	209 aa		4.18	□□□□□ -1.74
PIR1	YKL164C	SDA1	P53313	767 aa	Known RBP	4.18	□□□□□ -1.74
PIR1	YKL164C	COG8	Q04632	607 aa		4.18	□□□□□ -1.74
PIR1	YKL164C	YPL277C	Q08989	487 aa		4.18	□□□□□ -1.74
PIR1	YKL164C	YRF1-2	P40105	1681 aa		4.17	□□□□□ -1.74
PIR1	YKL164C	DIF1	O13577	133 aa		4.17	□□□□□ -1.74
PIR1	YKL164C	PRC1	P00729	532 aa		4.17	□□□□□ -1.74
PIR1	YKL164C	RPS13	P05756	151 aa	Known RBP	4.17	□□□□□ -1.74
PIR1	YKL164C	GAS1	P22146	559 aa	Known RBP	4.17	□□□□□ -1.74
PIR1	YKL164C	ATG19	P35193	415 aa		4.17	□□□□□ -1.74
PIR1	YKL164C	AIM3	P38266	947 aa	Known RBP	4.17	□□□□□ -1.74
PIR1	YKL164C	UBC9	P50623	157 aa	Predicted RBP	4.17	□□□□□ -1.74
PIR1	YKL164C	NCS6	P53088	359 aa		4.17	□□□□□ -1.74
PIR1	YKL164C	PUS2	P53167	370 aa		4.17	□□□□□ -1.74
PIR1	YKL164C	PBP1	P53297	722 aa	Known RBP	4.17	□□□□□ -1.74
PIR1	YKL164C	SLU7	Q02775	382 aa	Known RBP	4.17	□□□□□ -1.74
PIR1	YKL164C	YAP6	Q03935	383 aa		4.17	□□□□□ -1.74
PIR1	YKL164C	NHX1	Q04121	633 aa		4.17	□□□□□ -1.74
PIR1	YKL164C	ACK1	Q07622	623 aa	Predicted RBP	4.17	□□□□□ -1.74
PIR1	YKL164C	GUP2	Q08929	609 aa		4.17	□□□□□ -1.74
PIR1	YKL164C	YLR149C	Q99296	730 aa		4.17	□□□□□ -1.74
PIR1	YKL164C	TY4B-H	P0C2J7	1802 aa		4.16	□□□□□ -1.74
PIR1	YKL164C	TY4B-J	P47024	1803 aa		4.16	□□□□□ -1.74
PIR1	YKL164C	KRE5	P22023	1365 aa		4.16	□□□□□ -1.74
PIR1	YKL164C	YJR096W	P47137	282 aa		4.16	□□□□□ -1.74
PIR1	YKL164C	PMT3	P47190	753 aa		4.16	□□□□□ -1.74
PIR1	YKL164C	ZIP2	P53061	704 aa		4.16	□□□□□ -1.74
PIR1	YKL164C	UME1	Q03010	460 aa		4.16	□□□□□ -1.74
PIR1	YKL164C	RXT3	Q07458	294 aa		4.16	□□□□□ -1.74
PIR1	YKL164C	YOR352W	Q08816	343 aa		4.16	□□□□□ -1.74
PIR1	YKL164C	GIN4	Q12263	1142 aa		4.16	□□□□□ -1.74
PIR1	YKL164C	GPR1	Q12361	961 aa		4.16	□□□□□ -1.74
PIR1	YKL164C	Q0142	Q9ZZW4	58 aa		4.16	□□□□□ -1.74
PIR1	YKL164C	RAD9	P14737	1309 aa		4.16	□□□□□ -1.74
PIR1	YKL164C	RRP5	Q05022	1729 aa	Known RBP	4.15	□□□□□ -1.74
PIR1	YKL164C	PRP4	P20053	465 aa	Known RBP	4.15	□□□□□ -1.75
PIR1	YKL164C	CCR4	P31384	837 aa	Known RBP	4.15	□□□□□ -1.75
PIR1	YKL164C	SAP190	P36123	1033 aa		4.15	□□□□□ -1.75
PIR1	YKL164C	YKR051W	P36142	418 aa		4.15	□□□□□ -1.75
PIR1	YKL164C	RPN10	P38886	268 aa	Known RBP	4.15	□□□□□ -1.75
PIR1	YKL164C	GPP1	P41277	250 aa	Known RBP	4.15	□□□□□ -1.75
PIR1	YKL164C	SHR5	P41912	237 aa		4.15	□□□□□ -1.75
PIR1	YKL164C	YGR237C	P50089	785 aa		4.15	□□□□□ -1.75
PIR1	YKL164C	SPT20	P50875	604 aa		4.15	□□□□□ -1.75
PIR1	YKL164C	MTQ2	Q03920	221 aa	Predicted RBP	4.15	□□□□□ -1.75
PIR1	YKL164C	ASM4	Q05166	528 aa		4.15	□□□□□ -1.75
PIR1	YKL164C	CRR1	Q05790	422 aa		4.15	□□□□□ -1.75
PIR1	YKL164C	YLR224W	Q05947	369 aa		4.15	□□□□□ -1.75
PIR1	YKL164C	GUD1	Q07729	489 aa		4.15	□□□□□ -1.75
PIR1	YKL164C	KCS1	Q12494	1050 aa		4.15	□□□□□ -1.75
PIR1	YKL164C	NUP145	P49687	1317 aa		4.15	□□□□□ -1.75
PIR1	YKL164C	SOD2	P00447	233 aa		4.14	□□□□□ -1.75
PIR1	YKL164C	TUB3	P09734	445 aa	Known RBP	4.14	□□□□□ -1.75
PIR1	YKL164C	SSB1	P11484	613 aa	Known RBP	4.14	□□□□□ -1.75
PIR1	YKL164C	RNQ1	P25367	405 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms