RNA–Protein interactions for RNA: YJR139C

HOM6, Transcript of Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase), yeast

Gene HOM6, Length 1,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOM6	YJR139C	KAP123	P40069	1113 aa	Known RBP	13.8	□□□□□ -0.2
HOM6	YJR139C	POL31	P46957	487 aa		13.8	□□□□□ -0.2
HOM6	YJR139C	TIF35	Q04067	274 aa	Known RBP	13.8	□□□□□ -0.2
HOM6	YJR139C	YPR027C	Q12079	277 aa		13.8	□□□□□ -0.2
HOM6	YJR139C	GAL10	P04397	699 aa		13.79	□□□□□ -0.2
HOM6	YJR139C	SEC65	P29478	273 aa		13.79	□□□□□ -0.2
HOM6	YJR139C	XRS2	P33301	854 aa		13.79	□□□□□ -0.2
HOM6	YJR139C	SAP190	P36123	1033 aa		13.79	□□□□□ -0.2
HOM6	YJR139C	SAH1	P39954	449 aa	Known RBP	13.79	□□□□□ -0.2
HOM6	YJR139C	FYV8	P46949	817 aa	Known RBP	13.79	□□□□□ -0.2
HOM6	YJR139C	STE20	Q03497	939 aa	Known RBP	13.79	□□□□□ -0.2
HOM6	YJR139C	LCD1	Q04377	747 aa		13.79	□□□□□ -0.2
HOM6	YJR139C	MNL2	Q12205	849 aa		13.79	□□□□□ -0.2
HOM6	YJR139C	ATP1	P07251	545 aa	Known RBP	13.78	□□□□□ -0.2
HOM6	YJR139C	CHS1	P08004	1131 aa		13.78	□□□□□ -0.2
HOM6	YJR139C	COX11	P19516	300 aa	Known RBP	13.78	□□□□□ -0.2
HOM6	YJR139C	TFG2	P41896	400 aa	Predicted RBP	13.78	□□□□□ -0.2
HOM6	YJR139C	MAF1	P41910	395 aa		13.78	□□□□□ -0.2
HOM6	YJR139C	SBE2	P42223	864 aa	Known RBP	13.78	□□□□□ -0.2
HOM6	YJR139C	PPM1	Q04081	328 aa		13.78	□□□□□ -0.2
HOM6	YJR139C	YLR257W	Q06146	321 aa	Known RBP	13.78	□□□□□ -0.2
HOM6	YJR139C	SPO11	P23179	398 aa		13.77	□□□□□ -0.21
HOM6	YJR139C	KIP1	P28742	1111 aa		13.77	□□□□□ -0.21
HOM6	YJR139C	VPH1	P32563	840 aa	Known RBP	13.77	□□□□□ -0.21
HOM6	YJR139C	MAS1	P10507	462 aa		13.76	□□□□□ -0.21
HOM6	YJR139C	KGD2	P19262	463 aa	Predicted RBP	13.76	□□□□□ -0.21
HOM6	YJR139C	PEX1	P24004	1043 aa		13.76	□□□□□ -0.21
HOM6	YJR139C	RAD27	P26793	382 aa		13.76	□□□□□ -0.21
HOM6	YJR139C	EFB1	P32471	206 aa	Known RBP	13.76	□□□□□ -0.21
HOM6	YJR139C	YBR284W	P38150	797 aa		13.76	□□□□□ -0.21
HOM6	YJR139C	OYE3	P41816	400 aa	Predicted RBP	13.76	□□□□□ -0.21
HOM6	YJR139C	PIG1	Q06216	648 aa		13.76	□□□□□ -0.21
HOM6	YJR139C	ECM3	Q99252	613 aa		13.76	□□□□□ -0.21
HOM6	YJR139C	TPK1	P06244	397 aa		13.75	□□□□□ -0.21
HOM6	YJR139C	RNR1	P21524	888 aa	Known RBP	13.75	□□□□□ -0.21
HOM6	YJR139C	DAL2	P25335	343 aa		13.75	□□□□□ -0.21
HOM6	YJR139C	SLA2	P33338	968 aa		13.75	□□□□□ -0.21
HOM6	YJR139C	NIP100	P33420	868 aa		13.75	□□□□□ -0.21
HOM6	YJR139C	ZAP1	P47043	880 aa		13.75	□□□□□ -0.21
HOM6	YJR139C	HFM1	P51979	1187 aa		13.75	□□□□□ -0.21
HOM6	YJR139C	APM4	Q99186	491 aa		13.75	□□□□□ -0.21
HOM6	YJR139C	SCJ1	P25303	377 aa		13.74	□□□□□ -0.21
HOM6	YJR139C	GEM1	P39722	662 aa		13.74	□□□□□ -0.21
HOM6	YJR139C	ADA2	Q02336	434 aa		13.74	□□□□□ -0.21
HOM6	YJR139C	YML082W	Q04533	649 aa	Known RBP	13.74	□□□□□ -0.21
HOM6	YJR139C	AI5_BETA	Q9ZZX0	354 aa		13.74	□□□□□ -0.21
HOM6	YJR139C	PGS1	P25578	521 aa		13.73	□□□□□ -0.21
HOM6	YJR139C	SMC1	P32908	1225 aa		13.73	□□□□□ -0.21
HOM6	YJR139C	SDS3	P40505	327 aa		13.73	□□□□□ -0.21
HOM6	YJR139C	YJR054W	P47114	497 aa		13.73	□□□□□ -0.21
HOM6	YJR139C	DRN1	P53255	507 aa	Known RBP	13.73	□□□□□ -0.21
HOM6	YJR139C	MUB1	Q03162	620 aa		13.73	□□□□□ -0.21
HOM6	YJR139C	YPR078C	Q06813	372 aa		13.73	□□□□□ -0.21
HOM6	YJR139C	GAC1	P28006	793 aa		13.72	□□□□□ -0.21
HOM6	YJR139C	FRE1	P32791	686 aa		13.72	□□□□□ -0.21
HOM6	YJR139C	CSG2	P35206	410 aa		13.72	□□□□□ -0.21
HOM6	YJR139C	SHE3	P38272	425 aa	Known RBP	13.72	□□□□□ -0.21
HOM6	YJR139C	LEO1	P38439	464 aa		13.72	□□□□□ -0.21
HOM6	YJR139C	RTT107	P38850	1070 aa		13.72	□□□□□ -0.21
HOM6	YJR139C	LEA1	Q08963	238 aa	Predicted RBP	13.72	□□□□□ -0.21
HOM6	YJR139C	SNF1	P06782	633 aa	Known RBP	13.71	□□□□□ -0.21
HOM6	YJR139C	SPE1	P08432	466 aa		13.71	□□□□□ -0.21
HOM6	YJR139C	VFA1	P40080	203 aa		13.71	□□□□□ -0.21
HOM6	YJR139C	ESBP6	P53918	673 aa		13.71	□□□□□ -0.21
HOM6	YJR139C	MZM1	Q03429	123 aa	Predicted RBP	13.71	□□□□□ -0.21
HOM6	YJR139C	YLR287C	Q05881	355 aa		13.71	□□□□□ -0.21
HOM6	YJR139C	DAP1	Q12091	152 aa		13.71	□□□□□ -0.21
HOM6	YJR139C	HRT3	Q12347	344 aa		13.71	□□□□□ -0.21
HOM6	YJR139C	TUP1	P16649	713 aa		13.7	□□□□□ -0.22
HOM6	YJR139C	COQ8	P27697	501 aa		13.7	□□□□□ -0.22
HOM6	YJR139C	KDX1	P36005	433 aa		13.7	□□□□□ -0.22
HOM6	YJR139C	TAF1	P46677	1066 aa		13.7	□□□□□ -0.22
HOM6	YJR139C	VPS75	P53853	264 aa		13.7	□□□□□ -0.22
HOM6	YJR139C	UME1	Q03010	460 aa		13.7	□□□□□ -0.22
HOM6	YJR139C	PRM6	Q04705	352 aa		13.7	□□□□□ -0.22
HOM6	YJR139C	YPR148C	Q06523	435 aa		13.7	□□□□□ -0.22
HOM6	YJR139C	TAF10	Q12030	206 aa		13.7	□□□□□ -0.22
HOM6	YJR139C	CDC33	P07260	213 aa	Known RBP	13.69	□□□□□ -0.22
HOM6	YJR139C	PHO13	P19881	312 aa		13.69	□□□□□ -0.22
HOM6	YJR139C	PDE1	P22434	369 aa		13.69	□□□□□ -0.22
HOM6	YJR139C	SAT4	P25333	603 aa	Known RBP	13.69	□□□□□ -0.22
HOM6	YJR139C	VBA3	P25594	458 aa		13.69	□□□□□ -0.22
HOM6	YJR139C	PEP7	P32609	515 aa		13.69	□□□□□ -0.22
HOM6	YJR139C	VBA5	P36172	582 aa		13.69	□□□□□ -0.22
HOM6	YJR139C	RGD1	P38339	666 aa		13.69	□□□□□ -0.22
HOM6	YJR139C	DYS1	P38791	387 aa		13.69	□□□□□ -0.22
HOM6	YJR139C	TGL3	P40308	642 aa		13.69	□□□□□ -0.22
HOM6	YJR139C	VPS70	P47161	811 aa		13.69	□□□□□ -0.22
HOM6	YJR139C	TAD1	P53065	400 aa		13.69	□□□□□ -0.22
HOM6	YJR139C	GPM2	Q12008	311 aa		13.69	□□□□□ -0.22
HOM6	YJR139C	RRP6	Q12149	733 aa	Known RBP	13.69	□□□□□ -0.22
HOM6	YJR139C	TKL2	P33315	681 aa		13.68	□□□□□ -0.22
HOM6	YJR139C	YBR056W	P38081	501 aa		13.68	□□□□□ -0.22
HOM6	YJR139C	SIF2	P38262	535 aa		13.68	□□□□□ -0.22
HOM6	YJR139C	PEX28	P38848	579 aa		13.68	□□□□□ -0.22
HOM6	YJR139C	YNL011C	P53980	444 aa		13.68	□□□□□ -0.22
HOM6	YJR139C	MIC60	P36112	540 aa		13.67	□□□□□ -0.22
HOM6	YJR139C	TRZ1	P36159	838 aa	Predicted RBP	13.67	□□□□□ -0.22
HOM6	YJR139C	RDH54	P38086	958 aa		13.67	□□□□□ -0.22
HOM6	YJR139C	DSE1	P40077	573 aa		13.67	□□□□□ -0.22

Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms