RNA–Protein interactions for RNA: YHR171W

ATG7, Transcript of Autophagy-related protein and dual specificity member of the E1 family, yeastyeast

Gene ATG7, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG7YHR171W RKM2Q03942 479 aa6.39□□□□□ -1.39
ATG7YHR171W MFB1Q04922 465 aa6.39□□□□□ -1.39
ATG7YHR171W SPP382Q06411 708 aaPredicted RBP6.39□□□□□ -1.39
ATG7YHR171W CUE5Q08412 411 aaKnown RBP6.39□□□□□ -1.39
ATG7YHR171W SES1P07284 462 aaKnown RBP6.39□□□□□ -1.39
ATG7YHR171W UBC1P21734 215 aaKnown RBP6.39□□□□□ -1.39
ATG7YHR171W ADP1P25371 1049 aa6.39□□□□□ -1.39
ATG7YHR171W PDC6P26263 563 aaKnown RBP6.39□□□□□ -1.39
ATG7YHR171W DBF4P32325 704 aa6.39□□□□□ -1.39
ATG7YHR171W DAL1P32375 460 aa6.39□□□□□ -1.39
ATG7YHR171W CBF2P32504 956 aa6.39□□□□□ -1.39
ATG7YHR171W YHR202WP38887 602 aa6.39□□□□□ -1.39
ATG7YHR171W NPR2P39923 615 aa6.39□□□□□ -1.39
ATG7YHR171W PUG1P40100 303 aa6.39□□□□□ -1.39
ATG7YHR171W LTP1P40347 161 aa6.39□□□□□ -1.39
ATG7YHR171W DJP1P40564 432 aa6.39□□□□□ -1.39
ATG7YHR171W PPT1P53043 513 aa6.39□□□□□ -1.39
ATG7YHR171W GUP1P53154 560 aa6.39□□□□□ -1.39
ATG7YHR171W CBK1P53894 756 aa6.39□□□□□ -1.39
ATG7YHR171W EAR1Q03212 550 aa6.39□□□□□ -1.39
ATG7YHR171W YMR155WQ03795 547 aa6.39□□□□□ -1.39
ATG7YHR171W POL4P25615 582 aa6.38□□□□□ -1.39
ATG7YHR171W IFA38P38286 347 aa6.38□□□□□ -1.39
ATG7YHR171W EAF5P39995 279 aa6.38□□□□□ -1.39
ATG7YHR171W VNX1P42839 908 aa6.38□□□□□ -1.39
ATG7YHR171W YLR345WQ06137 509 aa6.38□□□□□ -1.39
ATG7YHR171W YCG1Q06680 1035 aa6.38□□□□□ -1.39
ATG7YHR171W GYP1Q08484 637 aa6.38□□□□□ -1.39
ATG7YHR171W DCS2Q12123 353 aa6.38□□□□□ -1.39
ATG7YHR171W LEU2P04173 364 aaPredicted RBP6.37□□□□□ -1.39
ATG7YHR171W PMS1P14242 873 aa6.37□□□□□ -1.39
ATG7YHR171W CKA1P15790 372 aa6.37□□□□□ -1.39
ATG7YHR171W OLE1P21147 510 aaKnown RBP6.37□□□□□ -1.39
ATG7YHR171W CBP3P21560 335 aa6.37□□□□□ -1.39
ATG7YHR171W SEC61P32915 480 aa6.37□□□□□ -1.39
ATG7YHR171W TFA2P36145 328 aa6.37□□□□□ -1.39
ATG7YHR171W MDE1P47095 244 aa6.37□□□□□ -1.39
ATG7YHR171W PRP42Q03776 544 aaKnown RBP6.37□□□□□ -1.39
ATG7YHR171W YDR514CQ04408 483 aa6.37□□□□□ -1.39
ATG7YHR171W RPL11AP0C0W9 174 aaKnown RBP6.36□□□□□ -1.39
ATG7YHR171W HSF1P10961 833 aa6.36□□□□□ -1.39
ATG7YHR171W VMA2P16140 517 aaKnown RBP6.36□□□□□ -1.39
ATG7YHR171W SAW1P39735 261 aa6.36□□□□□ -1.39
ATG7YHR171W YER156CP40093 338 aaKnown RBP6.36□□□□□ -1.39
ATG7YHR171W CCM1P48237 864 aaPredicted RBP6.36□□□□□ -1.39
ATG7YHR171W NCS2P53923 493 aaPredicted RBP6.36□□□□□ -1.39
ATG7YHR171W ZDS2P54786 942 aa6.36□□□□□ -1.39
ATG7YHR171W YDL129WQ07555 291 aa6.36□□□□□ -1.39
ATG7YHR171W SGT2Q12118 346 aaKnown RBP6.36□□□□□ -1.39
ATG7YHR171W HAL9Q12180 1030 aa6.36□□□□□ -1.39
ATG7YHR171W NOP58Q12499 511 aaKnown RBP6.36□□□□□ -1.39
ATG7YHR171W RPL11BQ3E757 174 aaPredicted RBP6.36□□□□□ -1.39
ATG7YHR171W MET17P06106 444 aa6.36□□□□□ -1.39
ATG7YHR171W FUM1P08417 488 aaKnown RBP6.36□□□□□ -1.39
ATG7YHR171W NUC1P08466 329 aa6.36□□□□□ -1.39
ATG7YHR171W SGF29P25554 259 aa6.36□□□□□ -1.39
ATG7YHR171W SEC65P29478 273 aa6.36□□□□□ -1.39
ATG7YHR171W PPE1P38796 400 aa6.36□□□□□ -1.39
ATG7YHR171W YJR124CP47159 448 aa6.36□□□□□ -1.39
ATG7YHR171W CTF18P49956 741 aa6.36□□□□□ -1.39
ATG7YHR171W CWC2Q12046 339 aaPredicted RBP6.36□□□□□ -1.39
ATG7YHR171W REX3Q12090 404 aa6.36□□□□□ -1.39
ATG7YHR171W RRP36Q12481 300 aaPredicted RBP6.36□□□□□ -1.39
ATG7YHR171W ADH4P10127 382 aa6.35□□□□□ -1.39
ATG7YHR171W RPT3P33298 428 aaKnown RBP6.35□□□□□ -1.39
ATG7YHR171W STE13P33894 931 aa6.35□□□□□ -1.39
ATG7YHR171W YKL151CP36059 337 aa6.35□□□□□ -1.39
ATG7YHR171W YLF2P38746 405 aa6.35□□□□□ -1.39
ATG7YHR171W RPN10P38886 268 aaKnown RBP6.35□□□□□ -1.39
ATG7YHR171W TIF11P38912 153 aaKnown RBP6.35□□□□□ -1.39
ATG7YHR171W YJL068CP40363 299 aa6.35□□□□□ -1.39
ATG7YHR171W LYS14P40971 790 aa6.35□□□□□ -1.39
ATG7YHR171W CIR1P42940 261 aa6.35□□□□□ -1.39
ATG7YHR171W CIT3P43635 486 aa6.35□□□□□ -1.39
ATG7YHR171W SPO74P45819 413 aa6.35□□□□□ -1.39
ATG7YHR171W HOS3Q02959 697 aaKnown RBP6.35□□□□□ -1.39
ATG7YHR171W PTC5Q12511 572 aa6.35□□□□□ -1.39
ATG7YHR171W REC107P21651 314 aa6.34□□□□□ -1.39
ATG7YHR171W TRX1P22217 103 aaKnown RBP6.34□□□□□ -1.39
ATG7YHR171W RTG1P32607 177 aa6.34□□□□□ -1.39
ATG7YHR171W DEF1P35732 738 aaKnown RBP6.34□□□□□ -1.39
ATG7YHR171W VPS41P38959 992 aa6.34□□□□□ -1.39
ATG7YHR171W YNR065CP53751 1116 aa6.34□□□□□ -1.39
ATG7YHR171W ROX1P25042 368 aa6.34□□□□□ -1.39
ATG7YHR171W CYS3P31373 394 aaKnown RBP6.34□□□□□ -1.39
ATG7YHR171W SEC21P32074 935 aaKnown RBP6.34□□□□□ -1.39
ATG7YHR171W ESL2P36168 1195 aa6.34□□□□□ -1.39
ATG7YHR171W TSL1P38427 1098 aaKnown RBP6.34□□□□□ -1.39
ATG7YHR171W PTC2P39966 464 aaKnown RBP6.34□□□□□ -1.39
ATG7YHR171W HRQ1Q05549 1077 aa6.34□□□□□ -1.39
ATG7YHR171W MDM38Q08179 573 aa6.34□□□□□ -1.39
ATG7YHR171W MCH5Q08777 521 aa6.34□□□□□ -1.39
ATG7YHR171W STF1P01098 86 aa6.33□□□□□ -1.4
ATG7YHR171W CPA2P03965 1118 aaKnown RBP6.33□□□□□ -1.4
ATG7YHR171W PFK2P16862 959 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
ATG7YHR171W SWD1P39706 426 aa6.33□□□□□ -1.4
ATG7YHR171W SCS2P40075 244 aaKnown RBP6.33□□□□□ -1.4
ATG7YHR171W INP51P40559 946 aaKnown RBP6.33□□□□□ -1.4
ATG7YHR171W LSB6P42951 607 aa6.33□□□□□ -1.4
ATG7YHR171W POL31P46957 487 aa6.33□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms