RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF6, Length 999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF6YHL025W YHR131CP38835 850 aa12.09□□□□□ -0.47
SNF6YHL025W RPL4BP49626 362 aaKnown RBP12.09□□□□□ -0.47
SNF6YHL025W BTN2P53286 410 aa12.09□□□□□ -0.47
SNF6YHL025W SIL1Q08199 421 aa12.09□□□□□ -0.47
SNF6YHL025W AI5_BETAQ9ZZX0 354 aa12.09□□□□□ -0.47
SNF6YHL025W RIF1P29539 1916 aa12.08□□□□□ -0.48
SNF6YHL025W RPS3P05750 240 aaKnown RBP12.08□□□□□ -0.48
SNF6YHL025W DPB3P27344 201 aa12.08□□□□□ -0.48
SNF6YHL025W EXO5P38289 585 aa12.08□□□□□ -0.48
SNF6YHL025W BRL1P38770 471 aa12.08□□□□□ -0.48
SNF6YHL025W DYS1P38791 387 aa12.08□□□□□ -0.48
SNF6YHL025W PSY2P40164 858 aa12.08□□□□□ -0.48
SNF6YHL025W LAM5P43560 674 aa12.08□□□□□ -0.48
SNF6YHL025W ULI1P43604 169 aa12.08□□□□□ -0.48
SNF6YHL025W SGM1P47166 707 aa12.08□□□□□ -0.48
SNF6YHL025W YMR018WQ04364 514 aa12.08□□□□□ -0.48
SNF6YHL025W ABP140Q08641 628 aaKnown RBP12.08□□□□□ -0.48
SNF6YHL025W SPT2P06843 333 aaPredicted RBP12.07□□□□□ -0.48
SNF6YHL025W ERG11P10614 530 aa12.07□□□□□ -0.48
SNF6YHL025W PRR1P28708 518 aa12.07□□□□□ -0.48
SNF6YHL025W BLI1P35727 113 aa12.07□□□□□ -0.48
SNF6YHL025W POA1P38218 177 aa12.07□□□□□ -0.48
SNF6YHL025W YHR054CP38780 354 aa12.07□□□□□ -0.48
SNF6YHL025W YTA12P40341 825 aa12.07□□□□□ -0.48
SNF6YHL025W SBE2P42223 864 aaKnown RBP12.07□□□□□ -0.48
SNF6YHL025W MCM6P53091 1017 aaKnown RBP12.07□□□□□ -0.48
SNF6YHL025W DRN1P53255 507 aaKnown RBP12.07□□□□□ -0.48
SNF6YHL025W MAL13P53338 473 aa12.07□□□□□ -0.48
SNF6YHL025W YNL134CP53912 376 aaKnown RBP12.07□□□□□ -0.48
SNF6YHL025W YNL115CP53925 644 aa12.07□□□□□ -0.48
SNF6YHL025W PCD1Q12524 340 aa12.07□□□□□ -0.48
SNF6YHL025W RNR1P21524 888 aaKnown RBP12.06□□□□□ -0.48
SNF6YHL025W RRT12P25381 491 aa12.06□□□□□ -0.48
SNF6YHL025W REI1P38344 393 aaPredicted RBP12.06□□□□□ -0.48
SNF6YHL025W KAP123P40069 1113 aaKnown RBP12.06□□□□□ -0.48
SNF6YHL025W PHO86P46956 311 aa12.06□□□□□ -0.48
SNF6YHL025W KAP114P53067 1004 aa12.06□□□□□ -0.48
SNF6YHL025W YGR130CP53278 816 aa12.06□□□□□ -0.48
SNF6YHL025W ALG11P53954 548 aaKnown RBP12.06□□□□□ -0.48
SNF6YHL025W CWC21Q03375 135 aaKnown RBP12.06□□□□□ -0.48
SNF6YHL025W SFI1Q12369 946 aa12.06□□□□□ -0.48
SNF6YHL025W ECM3Q99252 613 aa12.06□□□□□ -0.48
SNF6YHL025W ADE4P04046 510 aaKnown RBP12.05□□□□□ -0.48
SNF6YHL025W CAD1P24813 409 aaKnown RBP12.05□□□□□ -0.48
SNF6YHL025W BCH2P36122 765 aa12.05□□□□□ -0.48
SNF6YHL025W DRE2P36152 348 aa12.05□□□□□ -0.48
SNF6YHL025W PTC4P38089 393 aa12.05□□□□□ -0.48
SNF6YHL025W TVP23P38962 199 aa12.05□□□□□ -0.48
SNF6YHL025W SAH1P39954 449 aaKnown RBP12.05□□□□□ -0.48
SNF6YHL025W YER186CP40101 306 aa12.05□□□□□ -0.48
SNF6YHL025W INP51P40559 946 aaKnown RBP12.05□□□□□ -0.48
SNF6YHL025W OSH2Q12451 1283 aa12.05□□□□□ -0.48
SNF6YHL025W NOP14Q99207 810 aaKnown RBP12.05□□□□□ -0.48
SNF6YHL025W GAL10P04397 699 aa12.04□□□□□ -0.48
SNF6YHL025W FUB1P25659 250 aa12.04□□□□□ -0.48
SNF6YHL025W UBX7P38349 436 aa12.04□□□□□ -0.48
SNF6YHL025W SMF1P38925 575 aa12.04□□□□□ -0.48
SNF6YHL025W SPC72P39723 622 aa12.04□□□□□ -0.48
SNF6YHL025W GCV2P49095 1034 aa12.04□□□□□ -0.48
SNF6YHL025W JJJ1P53863 590 aa12.04□□□□□ -0.48
SNF6YHL025W POB3Q04636 552 aaKnown RBP12.04□□□□□ -0.48
SNF6YHL025W PUS1Q12211 544 aaKnown RBP12.04□□□□□ -0.48
SNF6YHL025W BYE1P36106 594 aa12.03□□□□□ -0.48
SNF6YHL025W RCK2P38623 610 aa12.03□□□□□ -0.48
SNF6YHL025W ALT2P52892 507 aa12.03□□□□□ -0.48
SNF6YHL025W YGR111WP53265 400 aa12.03□□□□□ -0.48
SNF6YHL025W YMR114CQ04471 368 aaKnown RBP12.03□□□□□ -0.48
SNF6YHL025W ERV41Q04651 352 aa12.03□□□□□ -0.48
SNF6YHL025W NOP58Q12499 511 aaKnown RBP12.03□□□□□ -0.48
SNF6YHL025W YER152CP10356 443 aa12.02□□□□□ -0.49
SNF6YHL025W SPT5P27692 1063 aaKnown RBP12.02□□□□□ -0.49
SNF6YHL025W RRP1P35178 278 aaPredicted RBP12.02□□□□□ -0.49
SNF6YHL025W YHL026CP38740 315 aa12.02□□□□□ -0.49
SNF6YHL025W YMR1P47147 688 aaKnown RBP RIP-Chip data12.02□□□□□ -0.49not detected
SNF6YHL025W YDR222WQ04925 415 aa12.02□□□□□ -0.49
SNF6YHL025W GFA1P14742 717 aaKnown RBP12.01□□□□□ -0.49
SNF6YHL025W RRN6P32786 894 aa12.01□□□□□ -0.49
SNF6YHL025W HIS2P38635 335 aa12.01□□□□□ -0.49
SNF6YHL025W ALT1P52893 592 aa12.01□□□□□ -0.49
SNF6YHL025W CWC22P53333 577 aaKnown RBP12.01□□□□□ -0.49
SNF6YHL025W NOP13P53883 403 aaKnown RBP RIP-Chip data12.01□□□□□ -0.49not detected
SNF6YHL025W YLR455WQ06188 304 aa12.01□□□□□ -0.49
SNF6YHL025W DNL4Q08387 944 aaPredicted RBP12.01□□□□□ -0.49
SNF6YHL025W PAP1P29468 568 aaKnown RBP12□□□□□ -0.49
SNF6YHL025W YMC2P38087 329 aa12□□□□□ -0.49
SNF6YHL025W TDA3P38758 523 aa12□□□□□ -0.49
SNF6YHL025W MAD1P40957 749 aa12□□□□□ -0.49
SNF6YHL025W PUS2P53167 370 aa12□□□□□ -0.49
SNF6YHL025W DIG1Q03063 452 aaKnown RBP12□□□□□ -0.49
SNF6YHL025W YPR027CQ12079 277 aa12□□□□□ -0.49
SNF6YHL025W CTF3Q12748 733 aa12□□□□□ -0.49
SNF6YHL025W TIF1P10081 395 aaKnown RBP11.99□□□□□ -0.49
SNF6YHL025W RSA4P25382 515 aaKnown RBP11.99□□□□□ -0.49
SNF6YHL025W CYS3P31373 394 aaKnown RBP11.99□□□□□ -0.49
SNF6YHL025W EFB1P32471 206 aaKnown RBP11.99□□□□□ -0.49
SNF6YHL025W NCL1P38205 684 aaKnown RBP11.99□□□□□ -0.49
SNF6YHL025W ZAP1P47043 880 aa11.99□□□□□ -0.49
SNF6YHL025W HOP2P53187 214 aa11.99□□□□□ -0.49
SNF6YHL025W SNU56Q03782 492 aaKnown RBP11.99□□□□□ -0.49
SNF6YHL025W ATG16Q03818 150 aa11.99□□□□□ -0.49
Retrieved 100 of 5,963 RNA–protein pairs in 73.1 ms