RNA–Protein interactions for RNA: YGR136W

LSB1, Transcript of Negative regulator of actin nucleation-promoting factor activity, yeastyeast

Gene LSB1, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB1YGR136W VPS53P47061 822 aa4.7□□□□□ -1.66
LSB1YGR136W PIB2P53191 635 aa4.7□□□□□ -1.66
LSB1YGR136W DUS1P53759 423 aaKnown RBP4.7□□□□□ -1.66
LSB1YGR136W CDA2Q06703 312 aa4.7□□□□□ -1.66
LSB1YGR136W FIG2P25653 1609 aa4.7□□□□□ -1.66
LSB1YGR136W GSC2P40989 1895 aa4.69□□□□□ -1.66
LSB1YGR136W PMA1P05030 918 aaKnown RBP4.69□□□□□ -1.66
LSB1YGR136W ERS1P17261 260 aa4.69□□□□□ -1.66
LSB1YGR136W RAD53P22216 821 aa4.69□□□□□ -1.66
LSB1YGR136W ADP1P25371 1049 aa4.69□□□□□ -1.66
LSB1YGR136W ARE1P25628 610 aa4.69□□□□□ -1.66
LSB1YGR136W PEP3P27801 918 aa4.69□□□□□ -1.66
LSB1YGR136W CDC11P32458 415 aa4.69□□□□□ -1.66
LSB1YGR136W TSA1P34760 196 aaKnown RBP4.69□□□□□ -1.66
LSB1YGR136W SKI2P35207 1287 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
LSB1YGR136W YBL028CP38202 106 aa4.69□□□□□ -1.66
LSB1YGR136W ETP1P38748 585 aaKnown RBP4.69□□□□□ -1.66
LSB1YGR136W YMR147WP40218 223 aaKnown RBP4.69□□□□□ -1.66
LSB1YGR136W PEX14P53112 341 aa4.69□□□□□ -1.66
LSB1YGR136W YLR225CQ05948 407 aaKnown RBP4.69□□□□□ -1.66
LSB1YGR136W YDL124WQ07551 312 aaKnown RBP4.69□□□□□ -1.66
LSB1YGR136W PSK2Q08217 1101 aa4.69□□□□□ -1.66
LSB1YGR136W PCL8Q08966 492 aa4.69□□□□□ -1.66
LSB1YGR136W GNT1Q12096 491 aa4.69□□□□□ -1.66
LSB1YGR136W TAH18Q12181 623 aa4.69□□□□□ -1.66
LSB1YGR136W NSI1Q12457 570 aa4.69□□□□□ -1.66
LSB1YGR136W CSR2Q12734 1121 aa4.69□□□□□ -1.66
LSB1YGR136W MSH2P25847 964 aa4.68□□□□□ -1.66
LSB1YGR136W YHL017WP38745 532 aa4.68□□□□□ -1.66
LSB1YGR136W KEL1P38853 1164 aaKnown RBP4.68□□□□□ -1.66
LSB1YGR136W MPH1P40562 993 aa4.68□□□□□ -1.66
LSB1YGR136W MMM1P41800 426 aa4.68□□□□□ -1.66
LSB1YGR136W SLS1P42900 643 aa4.68□□□□□ -1.66
LSB1YGR136W IRC8P47046 822 aa4.68□□□□□ -1.66
LSB1YGR136W ARP5P53946 755 aa4.68□□□□□ -1.66
LSB1YGR136W UGO1Q03327 502 aa4.68□□□□□ -1.66
LSB1YGR136W HRQ1Q05549 1077 aa4.68□□□□□ -1.66
LSB1YGR136W YPL260WQ08977 551 aa4.68□□□□□ -1.66
LSB1YGR136W KEL3Q08979 651 aaPredicted RBP4.68□□□□□ -1.66
LSB1YGR136W NOP14Q99207 810 aaKnown RBP4.68□□□□□ -1.66
LSB1YGR136W LAM4P38800 1345 aa4.68□□□□□ -1.66
LSB1YGR136W DED1P06634 604 aaKnown RBP4.67□□□□□ -1.66
LSB1YGR136W MATALPHA2P0CY08 210 aa4.67□□□□□ -1.66
LSB1YGR136W HMLALPHA2P0CY09 210 aa4.67□□□□□ -1.66
LSB1YGR136W SSB1P11484 613 aaKnown RBP4.67□□□□□ -1.66
LSB1YGR136W PFK2P16862 959 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
LSB1YGR136W PRX1P34227 261 aaKnown RBP4.67□□□□□ -1.66
LSB1YGR136W THI80P35202 319 aa4.67□□□□□ -1.66
LSB1YGR136W REI1P38344 393 aaPredicted RBP4.67□□□□□ -1.66
LSB1YGR136W RRP8P38961 392 aaKnown RBP4.67□□□□□ -1.66
LSB1YGR136W YAR028WP39548 234 aa4.67□□□□□ -1.66
LSB1YGR136W GEM1P39722 662 aa4.67□□□□□ -1.66
LSB1YGR136W SSB2P40150 613 aaKnown RBP4.67□□□□□ -1.66
LSB1YGR136W RSM25P40496 264 aa4.67□□□□□ -1.66
LSB1YGR136W CIT3P43635 486 aa4.67□□□□□ -1.66
LSB1YGR136W YGL176CP46945 554 aa4.67□□□□□ -1.66
LSB1YGR136W YKE2P52553 114 aa4.67□□□□□ -1.66
LSB1YGR136W ETT1Q08421 412 aaKnown RBP4.67□□□□□ -1.66
LSB1YGR136W PLP2Q12017 286 aa4.67□□□□□ -1.66
LSB1YGR136W GIN4Q12263 1142 aa4.67□□□□□ -1.66
LSB1YGR136W HSP82P02829 709 aaKnown RBP4.66□□□□□ -1.66
LSB1YGR136W TSR4P25040 408 aa4.66□□□□□ -1.66
LSB1YGR136W IMP2'P32351 346 aa4.66□□□□□ -1.66
LSB1YGR136W HSP78P33416 811 aa4.66□□□□□ -1.66
LSB1YGR136W TOM20P35180 183 aa4.66□□□□□ -1.66
LSB1YGR136W APE3P37302 537 aaKnown RBP4.66□□□□□ -1.66
LSB1YGR136W MCM7P38132 845 aa4.66□□□□□ -1.66
LSB1YGR136W ALG3P38179 458 aa4.66□□□□□ -1.66
LSB1YGR136W CRG1P38892 291 aaRIP-Chip data4.66□□□□□ -1.66not detected
LSB1YGR136W ACA1P39970 489 aa4.66□□□□□ -1.66
LSB1YGR136W ALR2P43553 858 aa4.66□□□□□ -1.66
LSB1YGR136W YJR142WP47173 342 aa4.66□□□□□ -1.66
LSB1YGR136W CTF18P49956 741 aa4.66□□□□□ -1.66
LSB1YGR136W RBA50Q04418 439 aa4.66□□□□□ -1.66
LSB1YGR136W MRD1Q06106 887 aaKnown RBP4.66□□□□□ -1.66
LSB1YGR136W ESC2Q06340 456 aa4.66□□□□□ -1.66
LSB1YGR136W SPN1Q06505 410 aaPredicted RBP4.66□□□□□ -1.66
LSB1YGR136W PEX19Q07418 342 aa4.66□□□□□ -1.66
LSB1YGR136W PTC5Q12511 572 aa4.66□□□□□ -1.66
LSB1YGR136W CPA2P03965 1118 aaKnown RBP4.65□□□□□ -1.67
LSB1YGR136W RPN12P32496 274 aa4.65□□□□□ -1.67
LSB1YGR136W WHI3P34761 661 aaKnown RBP4.65□□□□□ -1.67
LSB1YGR136W MOT2P34909 587 aaKnown RBP4.65□□□□□ -1.67
LSB1YGR136W RTS1P38903 757 aa4.65□□□□□ -1.67
LSB1YGR136W SIT1P39980 628 aa4.65□□□□□ -1.67
LSB1YGR136W TPM2P40414 161 aa4.65□□□□□ -1.67
LSB1YGR136W VID28P40547 921 aa4.65□□□□□ -1.67
LSB1YGR136W CIR1P42940 261 aa4.65□□□□□ -1.67
LSB1YGR136W PIL1P53252 339 aaKnown RBP4.65□□□□□ -1.67
LSB1YGR136W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.65□□□□□ -1.67 RIP-Chip
LSB1YGR136W AVO1Q08236 1176 aa4.65□□□□□ -1.67
LSB1YGR136W YOR059CQ08448 450 aaKnown RBP4.65□□□□□ -1.67
LSB1YGR136W YPL150WQ12152 901 aa4.65□□□□□ -1.67
LSB1YGR136W TUB2P02557 457 aaKnown RBP4.64□□□□□ -1.67
LSB1YGR136W ERR1P0CX10 437 aa4.64□□□□□ -1.67
LSB1YGR136W ERR2P0CX11 437 aa4.64□□□□□ -1.67
LSB1YGR136W COQ1P18900 473 aa4.64□□□□□ -1.67
LSB1YGR136W PRE8P23639 250 aa4.64□□□□□ -1.67
LSB1YGR136W PUF4P25339 888 aaKnown RBP RIP-Chip data4.64□□□□□ -1.67not detected
LSB1YGR136W SFP1P32432 683 aa4.64□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms