RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W ELA1P53861 379 aaPredicted RBP3.91□□□□□ -1.78
CAF130YGR134W HEL2Q05580 639 aaKnown RBP3.91□□□□□ -1.78
CAF130YGR134W YPR071WQ12346 211 aa3.91□□□□□ -1.78
CAF130YGR134W RMP1Q12530 201 aa3.91□□□□□ -1.78
CAF130YGR134W CDC16P09798 840 aa3.91□□□□□ -1.78
CAF130YGR134W PDX1P16451 410 aa3.91□□□□□ -1.78
CAF130YGR134W ADP1P25371 1049 aa3.91□□□□□ -1.78
CAF130YGR134W CDC12P32468 407 aaKnown RBP3.91□□□□□ -1.78
CAF130YGR134W FRD1P32614 470 aaKnown RBP3.91□□□□□ -1.78
CAF130YGR134W SAH1P39954 449 aaKnown RBP3.91□□□□□ -1.78
CAF130YGR134W TOK1P40310 691 aa3.91□□□□□ -1.78
CAF130YGR134W MAD2P40958 196 aa3.91□□□□□ -1.78
CAF130YGR134W YJL055WP47044 245 aa3.91□□□□□ -1.78
CAF130YGR134W YJR039WP47107 1121 aa3.91□□□□□ -1.78
CAF130YGR134W MTC3P53077 123 aa3.91□□□□□ -1.78
CAF130YGR134W BTN2P53286 410 aa3.91□□□□□ -1.78
CAF130YGR134W YNR040WP53736 256 aa3.91□□□□□ -1.78
CAF130YGR134W UTP5Q04177 643 aaKnown RBP3.91□□□□□ -1.78
CAF130YGR134W DAL80P26343 269 aa3.9□□□□□ -1.78
CAF130YGR134W FYV8P46949 817 aaKnown RBP3.9□□□□□ -1.78
CAF130YGR134W MAD3P47074 515 aa3.9□□□□□ -1.78
CAF130YGR134W ERV25P54837 211 aaKnown RBP3.9□□□□□ -1.78
CAF130YGR134W ARP4P80428 489 aa3.9□□□□□ -1.78
CAF130YGR134W GYP1Q08484 637 aa3.9□□□□□ -1.78
CAF130YGR134W GRX6Q12438 231 aa3.9□□□□□ -1.78
CAF130YGR134W SKS1Q12505 502 aa3.9□□□□□ -1.78
CAF130YGR134W MDS3P53094 1487 aa3.9□□□□□ -1.78
CAF130YGR134W ACO1P19414 778 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
CAF130YGR134W SEC21P32074 935 aaKnown RBP3.9□□□□□ -1.79
CAF130YGR134W GCD11P32481 527 aaKnown RBP3.9□□□□□ -1.79
CAF130YGR134W CTF13P35203 478 aa3.9□□□□□ -1.79
CAF130YGR134W NCL1P38205 684 aaKnown RBP3.9□□□□□ -1.79
CAF130YGR134W UTP7P40055 554 aaKnown RBP3.9□□□□□ -1.79
CAF130YGR134W RNR4P49723 345 aaKnown RBP3.9□□□□□ -1.79
CAF130YGR134W TEP1P53916 434 aa3.9□□□□□ -1.79
CAF130YGR134W PRP42Q03776 544 aaKnown RBP3.9□□□□□ -1.79
CAF130YGR134W LCD1Q04377 747 aa3.9□□□□□ -1.79
CAF130YGR134W ECM22Q05958 814 aaPredicted RBP3.9□□□□□ -1.79
CAF130YGR134W DIN7Q12086 430 aa3.9□□□□□ -1.79
CAF130YGR134W UBC1P21734 215 aaKnown RBP3.89□□□□□ -1.79
CAF130YGR134W RRP7P25368 297 aaPredicted RBP3.89□□□□□ -1.79
CAF130YGR134W XRS2P33301 854 aa3.89□□□□□ -1.79
CAF130YGR134W YKL107WP34251 309 aa3.89□□□□□ -1.79
CAF130YGR134W YLF2P38746 405 aa3.89□□□□□ -1.79
CAF130YGR134W KAP123P40069 1113 aaKnown RBP3.89□□□□□ -1.79
CAF130YGR134W JJJ2P46997 583 aa3.89□□□□□ -1.79
CAF130YGR134W CTF18P49956 741 aa3.89□□□□□ -1.79
CAF130YGR134W MRPL19P53875 158 aa3.89□□□□□ -1.79
CAF130YGR134W YPL071CQ02864 156 aa3.89□□□□□ -1.79
CAF130YGR134W SPC19Q03954 165 aa3.89□□□□□ -1.79
CAF130YGR134W OMS1Q06668 471 aa3.89□□□□□ -1.79
CAF130YGR134W GUP2Q08929 609 aa3.89□□□□□ -1.79
CAF130YGR134W SPE3Q12074 293 aaKnown RBP3.89□□□□□ -1.79
CAF130YGR134W RRG1Q12167 365 aaPredicted RBP3.89□□□□□ -1.79
CAF130YGR134W MTH1P35198 433 aa3.89□□□□□ -1.79
CAF130YGR134W GEX2P36173 615 aa3.89□□□□□ -1.79
CAF130YGR134W YBR138CP38277 524 aa3.89□□□□□ -1.79
CAF130YGR134W AIM46P38885 310 aa3.89□□□□□ -1.79
CAF130YGR134W YER156CP40093 338 aaKnown RBP3.89□□□□□ -1.79
CAF130YGR134W CCT8P47079 568 aaKnown RBP3.89□□□□□ -1.79
CAF130YGR134W GUD1Q07729 489 aa3.89□□□□□ -1.79
CAF130YGR134W HAL9Q12180 1030 aa3.89□□□□□ -1.79
CAF130YGR134W PUS1Q12211 544 aaKnown RBP3.89□□□□□ -1.79
CAF130YGR134W HSH49Q99181 213 aaPredicted RBP3.89□□□□□ -1.79
CAF130YGR134W ADH4P10127 382 aa3.89□□□□□ -1.79
CAF130YGR134W VMA2P16140 517 aaKnown RBP3.89□□□□□ -1.79
CAF130YGR134W DAL7P21826 554 aa3.89□□□□□ -1.79
CAF130YGR134W RAD51P25454 400 aa3.89□□□□□ -1.79
CAF130YGR134W SRO9P25567 434 aaKnown RBP3.89□□□□□ -1.79
CAF130YGR134W MF(ALPHA)2P32435 120 aa3.89□□□□□ -1.79
CAF130YGR134W DLD1P32891 587 aa3.89□□□□□ -1.79
CAF130YGR134W YHR202WP38887 602 aa3.89□□□□□ -1.79
CAF130YGR134W EAF5P39995 279 aa3.89□□□□□ -1.79
CAF130YGR134W JEM1P40358 645 aa3.89□□□□□ -1.79
CAF130YGR134W CUS1Q02554 436 aaPredicted RBP3.89□□□□□ -1.79
CAF130YGR134W RTK1Q12100 620 aaPredicted RBP3.89□□□□□ -1.79
CAF130YGR134W YOL159C-AQ3E769 90 aa3.89□□□□□ -1.79
CAF130YGR134W PFK1P16861 987 aaKnown RBP3.88□□□□□ -1.79
CAF130YGR134W UGA3P26370 528 aa3.88□□□□□ -1.79
CAF130YGR134W SET3P36124 751 aa3.88□□□□□ -1.79
CAF130YGR134W TSL1P38427 1098 aaKnown RBP3.88□□□□□ -1.79
CAF130YGR134W MXR1P40029 184 aa3.88□□□□□ -1.79
CAF130YGR134W EMP65P40085 556 aa3.88□□□□□ -1.79
CAF130YGR134W PRP43P53131 767 aaKnown RBP3.88□□□□□ -1.79
CAF130YGR134W SLD3P53135 668 aa3.88□□□□□ -1.79
CAF130YGR134W YPL272CQ08984 517 aa3.88□□□□□ -1.79
CAF130YGR134W NOP58Q12499 511 aaKnown RBP3.88□□□□□ -1.79
CAF130YGR134W YBR182C-AQ8TGU6 64 aa3.88□□□□□ -1.79
CAF130YGR134W YBT1P32386 1661 aa3.88□□□□□ -1.79
CAF130YGR134W IRC20Q06554 1556 aa3.88□□□□□ -1.79
CAF130YGR134W PHR1P05066 565 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
CAF130YGR134W PRT1P06103 763 aaKnown RBP3.88□□□□□ -1.79
CAF130YGR134W HTS1P07263 546 aaKnown RBP3.88□□□□□ -1.79
CAF130YGR134W RNA1P11745 407 aaKnown RBP3.88□□□□□ -1.79
CAF130YGR134W KNS1P32350 737 aaPredicted RBP3.88□□□□□ -1.79
CAF130YGR134W EMC3P36039 253 aa3.88□□□□□ -1.79
CAF130YGR134W IML2P47031 731 aa3.88□□□□□ -1.79
CAF130YGR134W VTC4P47075 721 aa3.88□□□□□ -1.79
CAF130YGR134W NOP9P47077 666 aaKnown RBP3.88□□□□□ -1.79
CAF130YGR134W PEX13P80667 386 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms