RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C PSY4P38193 441 aa4.69□□□□□ -1.66
SPB4YFL002C YHL012WP38709 493 aa4.69□□□□□ -1.66
SPB4YFL002C NDE1P40215 560 aa4.69□□□□□ -1.66
SPB4YFL002C SRB7P47822 140 aa4.69□□□□□ -1.66
SPB4YFL002C PCL10P53124 433 aa4.69□□□□□ -1.66
SPB4YFL002C MOT3P54785 490 aaKnown RBP4.69□□□□□ -1.66
SPB4YFL002C OMS1Q06668 471 aa4.69□□□□□ -1.66
SPB4YFL002C TSR2Q06672 205 aaKnown RBP4.69□□□□□ -1.66
SPB4YFL002C XYL2Q07993 356 aa4.69□□□□□ -1.66
SPB4YFL002C YOR059CQ08448 450 aaKnown RBP4.69□□□□□ -1.66
SPB4YFL002C YOR022CQ12204 715 aa4.69□□□□□ -1.66
SPB4YFL002C NSI1Q12457 570 aa4.69□□□□□ -1.66
SPB4YFL002C KCS1Q12494 1050 aa4.69□□□□□ -1.66
SPB4YFL002C SSM4P40318 1319 aa4.69□□□□□ -1.66
SPB4YFL002C RER1P25560 188 aa4.68□□□□□ -1.66
SPB4YFL002C MDL2P33311 773 aa4.68□□□□□ -1.66
SPB4YFL002C SHM2P37291 469 aaKnown RBP4.68□□□□□ -1.66
SPB4YFL002C SSZ1P38788 538 aaKnown RBP4.68□□□□□ -1.66
SPB4YFL002C YIL092WP40497 633 aa4.68□□□□□ -1.66
SPB4YFL002C PUS4P48567 403 aaKnown RBP4.68□□□□□ -1.66
SPB4YFL002C YMR018WQ04364 514 aa4.68□□□□□ -1.66
SPB4YFL002C RSC58Q07979 502 aa4.68□□□□□ -1.66
SPB4YFL002C NUR1Q12066 484 aa4.68□□□□□ -1.66
SPB4YFL002C MED1Q12321 566 aa4.68□□□□□ -1.66
SPB4YFL002C ARP7Q12406 477 aa4.68□□□□□ -1.66
SPB4YFL002C FOB1O13329 566 aa4.67□□□□□ -1.66
SPB4YFL002C CDC31P06704 161 aaKnown RBP4.67□□□□□ -1.66
SPB4YFL002C GFA1P14742 717 aaKnown RBP4.67□□□□□ -1.66
SPB4YFL002C PHO3P24031 467 aa4.67□□□□□ -1.66
SPB4YFL002C SAW1P39735 261 aa4.67□□□□□ -1.66
SPB4YFL002C RAI1P53063 387 aaKnown RBP4.67□□□□□ -1.66
SPB4YFL002C MEP3P53390 489 aa4.67□□□□□ -1.66
SPB4YFL002C ARP4P80428 489 aa4.67□□□□□ -1.66
SPB4YFL002C GPD1Q00055 391 aaKnown RBP4.67□□□□□ -1.66
SPB4YFL002C CWC2Q12046 339 aaPredicted RBP4.67□□□□□ -1.66
SPB4YFL002C HAL9Q12180 1030 aa4.67□□□□□ -1.66
SPB4YFL002C CDC26P14724 124 aa4.67□□□□□ -1.66
SPB4YFL002C NGG1P32494 702 aa4.67□□□□□ -1.66
SPB4YFL002C RPD3P32561 433 aa4.67□□□□□ -1.66
SPB4YFL002C SDS22P36047 338 aa4.67□□□□□ -1.66
SPB4YFL002C RRN3P36070 627 aa4.67□□□□□ -1.66
SPB4YFL002C YKR075CP36155 307 aa4.67□□□□□ -1.66
SPB4YFL002C POA1P38218 177 aa4.67□□□□□ -1.66
SPB4YFL002C SRP68P38687 599 aaKnown RBP4.67□□□□□ -1.66
SPB4YFL002C BEM4P39011 633 aa4.67□□□□□ -1.66
SPB4YFL002C RAD26P40352 1085 aa4.67□□□□□ -1.66
SPB4YFL002C PUS2P53167 370 aa4.67□□□□□ -1.66
SPB4YFL002C NSG2P53898 299 aa4.67□□□□□ -1.66
SPB4YFL002C NGL1Q08213 363 aaKnown RBP4.67□□□□□ -1.66
SPB4YFL002C YVC1Q12324 675 aa4.67□□□□□ -1.66
SPB4YFL002C GLN4P13188 809 aaKnown RBP4.66□□□□□ -1.66
SPB4YFL002C APL2P36000 726 aaPredicted RBP4.66□□□□□ -1.66
SPB4YFL002C STL1P39932 569 aa4.66□□□□□ -1.66
SPB4YFL002C EAF5P39995 279 aa4.66□□□□□ -1.66
SPB4YFL002C ESL1P40456 1118 aa4.66□□□□□ -1.66
SPB4YFL002C VID28P40547 921 aa4.66□□□□□ -1.66
SPB4YFL002C SBE2P42223 864 aaKnown RBP4.66□□□□□ -1.66
SPB4YFL002C IRC5P43610 853 aa4.66□□□□□ -1.66
SPB4YFL002C BRE5P53741 515 aaKnown RBP4.66□□□□□ -1.66
SPB4YFL002C NOP15P53927 220 aaPredicted RBP4.66□□□□□ -1.66
SPB4YFL002C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.66□□□□□ -1.66not detected
SPB4YFL002C SFA1P32771 386 aa4.65□□□□□ -1.66
SPB4YFL002C JJJ3P47138 172 aa4.65□□□□□ -1.66
SPB4YFL002C DUS1P53759 423 aaKnown RBP4.65□□□□□ -1.66
SPB4YFL002C HXT4P32467 576 aa4.65□□□□□ -1.67
SPB4YFL002C XRS2P33301 854 aa4.65□□□□□ -1.67
SPB4YFL002C TGL1P34163 548 aa4.65□□□□□ -1.67
SPB4YFL002C AKL1P38080 1108 aaKnown RBP4.65□□□□□ -1.67
SPB4YFL002C APM3P38153 483 aa4.65□□□□□ -1.67
SPB4YFL002C RFC5P38251 354 aa4.65□□□□□ -1.67
SPB4YFL002C MIP6P38760 659 aaKnown RBP4.65□□□□□ -1.67
SPB4YFL002C YIL108WP40483 696 aaKnown RBP4.65□□□□□ -1.67
SPB4YFL002C MTD1Q02046 320 aaKnown RBP4.65□□□□□ -1.67
SPB4YFL002C YLR407WQ06070 228 aa4.65□□□□□ -1.67
SPB4YFL002C THI72Q08579 599 aa4.65□□□□□ -1.67
SPB4YFL002C PSF3Q12146 194 aa4.65□□□□□ -1.67
SPB4YFL002C FBP1P09201 348 aa4.64□□□□□ -1.67
SPB4YFL002C PPE1P38796 400 aa4.64□□□□□ -1.67
SPB4YFL002C YHR202WP38887 602 aa4.64□□□□□ -1.67
SPB4YFL002C SPC72P39723 622 aa4.64□□□□□ -1.67
SPB4YFL002C SCS2P40075 244 aaKnown RBP4.64□□□□□ -1.67
SPB4YFL002C SSL1Q04673 461 aaPredicted RBP4.64□□□□□ -1.67
SPB4YFL002C HSF1P10961 833 aa4.63□□□□□ -1.67
SPB4YFL002C RSC6P25632 483 aa4.63□□□□□ -1.67
SPB4YFL002C DGR2P32330 852 aa4.63□□□□□ -1.67
SPB4YFL002C KAP123P40069 1113 aaKnown RBP4.63□□□□□ -1.67
SPB4YFL002C SMK1P41808 388 aa4.63□□□□□ -1.67
SPB4YFL002C MAD3P47074 515 aa4.63□□□□□ -1.67
SPB4YFL002C ARC35P53731 342 aaKnown RBP4.63□□□□□ -1.67
SPB4YFL002C LEE1Q02799 301 aaKnown RBP4.63□□□□□ -1.67
SPB4YFL002C RPS17AP02407 136 aaKnown RBP4.62□□□□□ -1.67
SPB4YFL002C YEL076C-AP0CX16 216 aa4.62□□□□□ -1.67
SPB4YFL002C YLR464WP0CX17 216 aa4.62□□□□□ -1.67
SPB4YFL002C ADH4P10127 382 aa4.62□□□□□ -1.67
SPB4YFL002C RPS17BP14127 136 aaKnown RBP4.62□□□□□ -1.67
SPB4YFL002C MF(ALPHA)2P32435 120 aa4.62□□□□□ -1.67
SPB4YFL002C SRP101P32916 621 aa4.62□□□□□ -1.67
SPB4YFL002C VPS8P39702 1274 aa4.62□□□□□ -1.67
SPB4YFL002C SSP120P39931 234 aaKnown RBP4.62□□□□□ -1.67
SPB4YFL002C YEL076CP39971 216 aa4.62□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms